Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25430

Experiment: Carbon source L-Ornithine 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 10 mM
2,646,858	-				-1.3
2,646,858	-				+1.1
2,646,863	+				-0.8
2,646,863	+				-0.8
2,646,863	+				+0.4
2,646,873	+				+0.2
2,646,876	-				-0.1
2,646,934	+				-0.0
2,646,951	+		PGA1_c25410	0.11	-1.3
2,646,959	+		PGA1_c25410	0.12	+0.5
2,646,966	+		PGA1_c25410	0.12	+0.3
2,646,975	+		PGA1_c25410	0.13	-0.1
2,647,014	-		PGA1_c25410	0.18	+0.7
2,647,031	-		PGA1_c25410	0.20	-0.2
2,647,063	-		PGA1_c25410	0.23	-0.8
2,647,076	+		PGA1_c25410	0.24	+0.7
2,647,078	-		PGA1_c25410	0.25	-0.8
2,647,129	-		PGA1_c25410	0.30	+0.9
2,647,140	-		PGA1_c25410	0.31	+0.1
2,647,211	-		PGA1_c25410	0.39	+0.6
2,647,214	+		PGA1_c25410	0.40	+0.6
2,647,222	-		PGA1_c25410	0.40	+0.5
2,647,239	+		PGA1_c25410	0.42	+0.5
2,647,313	-		PGA1_c25410	0.50	+0.4
2,647,335	-		PGA1_c25410	0.53	-0.7
2,647,469	-		PGA1_c25410	0.67	+0.3
2,647,471	+		PGA1_c25410	0.68	+0.2
2,647,550	+		PGA1_c25410	0.76	+0.9
2,647,550	-		PGA1_c25410	0.76	-0.7
2,647,574	+		PGA1_c25410	0.79	+0.5
2,647,582	-		PGA1_c25410	0.80	-0.1
2,647,587	+		PGA1_c25410	0.80	+0.6
2,647,587	+		PGA1_c25410	0.80	-2.9
2,647,594	+		PGA1_c25410	0.81	-0.8
2,647,595	-		PGA1_c25410	0.81	+0.1
2,647,595	-		PGA1_c25410	0.81	-0.4
2,647,616	-		PGA1_c25410	0.83	-1.2
2,647,655	+		PGA1_c25410	0.88	-1.5
2,647,663	-		PGA1_c25410	0.89	-1.1
2,647,671	+		PGA1_c25410	0.90	-0.4
2,647,671	+		PGA1_c25410	0.90	+0.2
2,647,700	+				+0.4
2,647,705	+				-1.3
2,647,713	+				+0.3
2,647,713	+				+0.9
2,647,718	-				-0.4
2,647,721	-				-1.0
2,647,750	-				-0.0
2,647,823	+				-0.3
2,647,823	+				-0.1
2,647,823	+				+0.3
2,647,824	-				-0.9
2,647,831	-				+0.5
2,647,831	-				-0.8
2,647,831	-				-1.9
2,647,831	-				-0.7
2,647,831	-				-1.1
2,647,833	+				-0.0
2,647,838	+				+0.5
2,647,838	+				-0.2
2,647,838	+				-0.6
2,647,882	-				-0.2
2,647,884	+				-0.1
2,647,892	-				+1.1
2,647,903	+				-0.0
2,647,911	-				+0.2
2,647,911	-				-0.5
2,647,911	-				-1.4
2,647,911	-				+1.1
2,647,911	-				-0.2
2,647,946	-				+0.6
2,647,995	+				-1.7
2,647,995	+				-0.9
2,648,071	+		PGA1_c25430	0.14	+1.1
2,648,078	-		PGA1_c25430	0.15	+0.2
2,648,079	-		PGA1_c25430	0.15	-0.1
2,648,079	-		PGA1_c25430	0.15	-0.2
2,648,117	+		PGA1_c25430	0.17	+0.1
2,648,117	+		PGA1_c25430	0.17	-0.4
2,648,125	-		PGA1_c25430	0.18	-1.5
2,648,158	-		PGA1_c25430	0.20	-0.4
2,648,241	+		PGA1_c25430	0.25	-0.4
2,648,332	+		PGA1_c25430	0.31	-0.7
2,648,406	+		PGA1_c25430	0.36	-0.1
2,648,425	+		PGA1_c25430	0.37	-0.5
2,648,433	-		PGA1_c25430	0.38	-0.7
2,648,470	-		PGA1_c25430	0.40	-0.2
2,648,470	-		PGA1_c25430	0.40	-0.4
2,648,470	-		PGA1_c25430	0.40	-0.1
2,648,498	-		PGA1_c25430	0.42	+0.7
2,648,529	-		PGA1_c25430	0.44	-0.2
2,648,586	+		PGA1_c25430	0.48	-0.3
2,648,586	+		PGA1_c25430	0.48	-0.4
2,648,756	+		PGA1_c25430	0.59	+0.2
2,648,764	-		PGA1_c25430	0.60	-0.6
2,648,769	+		PGA1_c25430	0.60	+0.0
2,648,772	-		PGA1_c25430	0.60	+0.9
2,648,774	+		PGA1_c25430	0.60	+1.3
2,648,777	-		PGA1_c25430	0.60	-0.6
2,648,777	-		PGA1_c25430	0.60	+0.2
2,648,787	+		PGA1_c25430	0.61	-0.3
2,648,872	+		PGA1_c25430	0.67	+0.0
2,648,899	+		PGA1_c25430	0.68	+1.2
2,648,932	+		PGA1_c25430	0.71	-0.7
2,648,957	+		PGA1_c25430	0.72	-0.1
2,648,965	-		PGA1_c25430	0.73	-1.2
2,649,030	+		PGA1_c25430	0.77	-0.7
2,649,038	-		PGA1_c25430	0.78	+0.1
2,649,038	-		PGA1_c25430	0.78	-0.2
2,649,047	-		PGA1_c25430	0.78	+0.9
2,649,148	+		PGA1_c25430	0.85	-1.0
2,649,156	-		PGA1_c25430	0.85	-0.4
2,649,156	-		PGA1_c25430	0.85	+0.1
2,649,160	+		PGA1_c25430	0.86	+0.0
2,649,160	+		PGA1_c25430	0.86	+0.8
2,649,160	+		PGA1_c25430	0.86	+0.3
2,649,168	-		PGA1_c25430	0.86	-1.5
2,649,168	-		PGA1_c25430	0.86	-1.1
2,649,168	-		PGA1_c25430	0.86	-1.4
2,649,168	-		PGA1_c25430	0.86	-1.0
2,649,284	+				+0.7
2,649,284	+				-0.1
2,649,284	+				+0.4
2,649,284	+				+1.0
2,649,292	-				+0.3
2,649,292	-				+0.7
2,649,292	-				+0.8
2,649,292	-				+0.9
2,649,299	+				-0.1
2,649,318	-				-0.5
2,649,382	-				-0.0
2,649,398	-				-0.4
2,649,399	+				+0.4
2,649,524	+				-0.9
2,649,586	-		PGA1_c25450	0.10	+0.3
2,649,591	-		PGA1_c25450	0.10	+0.0
2,649,600	+		PGA1_c25450	0.11	+1.5
2,649,600	+		PGA1_c25450	0.11	-0.5
2,649,610	+		PGA1_c25450	0.12	+0.1
2,649,610	+		PGA1_c25450	0.12	-0.6
2,649,618	-		PGA1_c25450	0.12	+2.6
2,649,645	+		PGA1_c25450	0.14	-0.4
2,649,645	+		PGA1_c25450	0.14	-0.2
2,649,653	-		PGA1_c25450	0.14	-0.2
2,649,653	-		PGA1_c25450	0.14	-1.9
2,649,653	-		PGA1_c25450	0.14	+0.5
2,649,653	-		PGA1_c25450	0.14	-0.1
2,649,653	-		PGA1_c25450	0.14	-0.7
2,649,663	-		PGA1_c25450	0.15	-0.1
2,649,697	-		PGA1_c25450	0.17	+0.0
2,649,706	+		PGA1_c25450	0.17	+0.1
2,649,706	+		PGA1_c25450	0.17	-0.6
2,649,710	-		PGA1_c25450	0.18	+1.2
2,649,803	+		PGA1_c25450	0.23	+0.5
2,649,803	-		PGA1_c25450	0.23	+0.9
2,649,812	+		PGA1_c25450	0.24	-1.5
2,649,812	+		PGA1_c25450	0.24	-1.1
2,649,820	-		PGA1_c25450	0.24	-0.4
2,649,867	+		PGA1_c25450	0.27	+0.9
2,649,948	+		PGA1_c25450	0.32	-0.0
2,649,951	-		PGA1_c25450	0.32	+0.1
2,649,987	+		PGA1_c25450	0.34	-0.5
2,649,987	-		PGA1_c25450	0.34	-0.5
2,649,987	-		PGA1_c25450	0.34	+1.8
2,650,002	-		PGA1_c25450	0.35	-0.5
2,650,039	+		PGA1_c25450	0.37	-0.2
2,650,039	+		PGA1_c25450	0.37	-0.6
2,650,039	+		PGA1_c25450	0.37	-0.8
2,650,044	+		PGA1_c25450	0.38	+0.6
2,650,069	+		PGA1_c25450	0.39	+0.9
2,650,107	+		PGA1_c25450	0.41	+0.2
2,650,115	-		PGA1_c25450	0.42	-0.1
2,650,115	-		PGA1_c25450	0.42	-0.5
2,650,115	-		PGA1_c25450	0.42	+0.1
2,650,182	-		PGA1_c25450	0.46	-1.2
2,650,190	-		PGA1_c25450	0.46	-0.2
2,650,190	-		PGA1_c25450	0.46	+0.5
2,650,190	-		PGA1_c25450	0.46	-0.0
2,650,231	+		PGA1_c25450	0.49	+1.3
2,650,239	-		PGA1_c25450	0.49	-0.1
2,650,256	-		PGA1_c25450	0.50	+1.2
2,650,338	-		PGA1_c25450	0.55	+1.1
2,650,375	+		PGA1_c25450	0.57	+0.9