Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF34036

Experiment: MoLS4 without Pyridoxine Hydrochloride

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpriA and DORF34036 are separated by 5 nucleotidesDORF34036 and DVU1285 are separated by 67 nucleotidesDVU1285 and DsrP are separated by 187 nucleotides DVU1284: priA - primosomal protein n (TIGR), at 1,376,876 to 1,379,254 priA DORF34036: DORF34036 - no description, at 1,379,260 to 1,379,436 DORF34036 DVU1285: DVU1285 - response regulator (TIGR), at 1,379,504 to 1,379,896 DVU1285 DVU1286: DsrP - Integral membrane protein (Shelley Haveman), at 1,380,084 to 1,381,247 DsrP Position (kb) 1379 1380Strain fitness (log2 ratio) -1 0 1at 1379.403 kb on - strand, within DORF34036at 1379.493 kb on - strandat 1379.598 kb on - strand, within DVU1285at 1379.721 kb on - strand, within DVU1285at 1379.831 kb on + strand, within DVU1285at 1379.997 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 without Pyridoxine Hydrochloride
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1,379,403 - DORF34036 0.81 -1.3
1,379,493 - -0.1
1,379,598 - DVU1285 0.24 -0.4
1,379,721 - DVU1285 0.55 -0.5
1,379,831 + DVU1285 0.83 -0.3
1,379,997 - -0.6

Or see this region's nucleotide sequence