Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32610

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
3,416,807	-		PGA1_c32580	0.79	-1.8
3,416,812	+		PGA1_c32580	0.79	-0.5
3,416,812	+		PGA1_c32580	0.79	-0.8
3,416,815	-		PGA1_c32580	0.79	-0.9
3,416,820	-		PGA1_c32580	0.80	+0.7
3,416,820	-		PGA1_c32580	0.80	-1.5
3,416,889	-		PGA1_c32580	0.86	-0.5
3,416,900	-		PGA1_c32580	0.87	+1.2
3,416,935	+				+0.1
3,416,944	+				-1.0
3,416,976	+				-0.4
3,416,990	-				+0.0
3,417,071	+		PGA1_c32590	0.12	+0.6
3,417,129	-		PGA1_c32590	0.34	-0.9
3,417,164	-		PGA1_c32590	0.48	-0.6
3,417,164	-		PGA1_c32590	0.48	+0.0
3,417,197	-		PGA1_c32590	0.60	-0.1
3,417,215	+		PGA1_c32590	0.67	+0.3
3,417,246	+		PGA1_c32590	0.79	+0.8
3,417,254	-		PGA1_c32590	0.83	+0.0
3,417,296	+				-1.8
3,417,296	+				-1.7
3,417,304	-				+0.5
3,417,305	+				-0.1
3,417,305	+				+0.5
3,417,311	+				+0.7
3,417,365	+				+0.2
3,417,405	+				+0.7
3,417,413	-				+0.8
3,417,413	-				-0.8
3,417,430	+				+0.1
3,417,430	+				-0.8
3,417,430	+				+0.8
3,417,438	-		PGA1_c32600	0.11	-1.1
3,417,438	-		PGA1_c32600	0.11	-0.2
3,417,438	-		PGA1_c32600	0.11	+0.0
3,417,440	+		PGA1_c32600	0.11	-0.5
3,417,440	+		PGA1_c32600	0.11	-1.7
3,417,440	+		PGA1_c32600	0.11	+0.4
3,417,440	+		PGA1_c32600	0.11	-0.2
3,417,445	+		PGA1_c32600	0.13	-0.5
3,417,448	-		PGA1_c32600	0.14	-0.2
3,417,448	-		PGA1_c32600	0.14	-0.2
3,417,448	-		PGA1_c32600	0.14	+0.3
3,417,448	-		PGA1_c32600	0.14	-0.3
3,417,448	-		PGA1_c32600	0.14	-2.9
3,417,448	-		PGA1_c32600	0.14	-0.9
3,417,450	+		PGA1_c32600	0.14	-0.3
3,417,453	-		PGA1_c32600	0.15	-0.4
3,417,453	-		PGA1_c32600	0.15	+1.4
3,417,458	-		PGA1_c32600	0.17	-0.1
3,417,458	-		PGA1_c32600	0.17	+0.7
3,417,465	-		PGA1_c32600	0.19	-0.8
3,417,470	-		PGA1_c32600	0.20	+0.0
3,417,496	+		PGA1_c32600	0.28	-1.7
3,417,504	-		PGA1_c32600	0.30	-0.7
3,417,594	-		PGA1_c32600	0.56	+0.1
3,417,632	+		PGA1_c32600	0.67	-0.6
3,417,635	-		PGA1_c32600	0.68	-1.3
3,417,635	-		PGA1_c32600	0.68	-0.2
3,417,678	+		PGA1_c32600	0.80	-1.2
3,417,684	+		PGA1_c32600	0.82	-0.9
3,417,686	-		PGA1_c32600	0.83	-0.2
3,417,746	+				-0.4
3,417,749	-				+0.2
3,417,753	+				-0.2
3,417,764	+				-1.2
3,417,764	+				-0.2
3,417,790	+				+0.8
3,417,791	-				-0.4
3,417,798	-				+0.2
3,417,801	+				+0.2
3,417,801	+				-0.8
3,417,801	+				-0.3
3,417,801	+				+0.2
3,417,801	+				+1.5
3,417,808	-				+0.1
3,417,809	-				-0.2
3,417,809	-				-0.0
3,417,823	+				+0.1
3,417,851	+				-3.2
3,417,877	+				+1.5
3,418,013	-		PGA1_c32610	0.21	+0.5
3,418,120	-		PGA1_c32610	0.32	-2.3
3,418,124	+		PGA1_c32610	0.33	+0.1
3,418,193	+		PGA1_c32610	0.40	+0.3
3,418,223	-		PGA1_c32610	0.43	+0.1
3,418,271	-		PGA1_c32610	0.47	-1.3
3,418,271	-		PGA1_c32610	0.47	-0.4
3,418,308	-		PGA1_c32610	0.51	-0.1
3,418,335	-		PGA1_c32610	0.54	+0.8
3,418,379	+		PGA1_c32610	0.58	+1.0
3,418,379	+		PGA1_c32610	0.58	-0.8
3,418,387	-		PGA1_c32610	0.59	-0.7
3,418,387	-		PGA1_c32610	0.59	-0.7
3,418,387	-		PGA1_c32610	0.59	-0.9
3,418,387	-		PGA1_c32610	0.59	+1.0
3,418,414	+		PGA1_c32610	0.62	+0.6
3,418,444	+		PGA1_c32610	0.65	-1.3
3,418,444	+		PGA1_c32610	0.65	+0.7
3,418,452	-		PGA1_c32610	0.66	-0.1
3,418,452	-		PGA1_c32610	0.66	-2.2
3,418,457	-		PGA1_c32610	0.66	+0.1
3,418,493	-		PGA1_c32610	0.70	+0.3
3,418,523	-		PGA1_c32610	0.73	-0.9
3,418,532	-		PGA1_c32610	0.74	-0.9
3,418,535	+		PGA1_c32610	0.74	+0.4
3,418,594	-		PGA1_c32610	0.80	-1.7
3,418,603	+		PGA1_c32610	0.81	+1.7
3,418,607	-		PGA1_c32610	0.81	-0.0
3,418,659	-		PGA1_c32610	0.87	-0.1
3,418,661	-		PGA1_c32610	0.87	-0.5
3,418,661	-		PGA1_c32610	0.87	+0.5
3,418,699	+				-0.7
3,418,707	-				-0.2
3,418,707	-				-0.8
3,418,794	+				-0.1
3,418,798	+				-0.7
3,418,854	+				-0.7
3,418,860	-				-1.2
3,418,862	+				+0.1
3,418,862	-				+0.5
3,418,862	-				-0.6
3,418,862	-				+0.2
3,418,867	+				+0.1
3,418,878	+				-0.1
3,418,878	+				-0.8
3,418,886	-				-0.1
3,418,917	-				+0.5
3,418,920	+				+0.5
3,418,971	+		PGA1_c32620	0.13	+0.1
3,418,981	+		PGA1_c32620	0.14	-0.8
3,418,981	+		PGA1_c32620	0.14	-0.2
3,418,989	-		PGA1_c32620	0.15	-0.1
3,419,003	+		PGA1_c32620	0.17	-1.1
3,419,021	-		PGA1_c32620	0.19	-0.9
3,419,091	-		PGA1_c32620	0.28	+0.3
3,419,176	-		PGA1_c32620	0.39	-1.8
3,419,176	-		PGA1_c32620	0.39	-0.4
3,419,180	+		PGA1_c32620	0.39	-1.5
3,419,182	+		PGA1_c32620	0.39	+0.6
3,419,264	+		PGA1_c32620	0.49	-0.2
3,419,329	+		PGA1_c32620	0.57	-1.6
3,419,330	+		PGA1_c32620	0.58	-0.4
3,419,349	+		PGA1_c32620	0.60	-0.7
3,419,357	-		PGA1_c32620	0.61	+1.4
3,419,395	+		PGA1_c32620	0.66	-0.1
3,419,395	+		PGA1_c32620	0.66	-0.6
3,419,409	+		PGA1_c32620	0.67	+0.2
3,419,417	-		PGA1_c32620	0.68	-1.1
3,419,437	-		PGA1_c32620	0.71	+0.2
3,419,504	-		PGA1_c32620	0.79	+1.5
3,419,525	-		PGA1_c32620	0.82	-1.7
3,419,539	+		PGA1_c32620	0.83	-0.5
3,419,677	+				+0.8
3,419,677	-				+0.2
3,419,677	-				-0.3
3,419,685	-				-0.2
3,419,714	+				+0.4
3,419,722	-				-1.1
3,419,722	-				-0.2
3,419,722	-				+0.5
3,419,789	-				-0.3