Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29210

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
3,056,493	-		PGA1_c29190	0.76	-1.5
3,056,526	-		PGA1_c29190	0.80	+0.1
3,056,618	-				-0.2
3,056,618	-				+0.3
3,056,673	+				-0.1
3,056,775	+		PGA1_c29200	0.15	-0.0
3,056,775	+		PGA1_c29200	0.15	+1.5
3,056,775	+		PGA1_c29200	0.15	-3.3
3,056,783	-		PGA1_c29200	0.16	-0.1
3,056,793	+		PGA1_c29200	0.17	+0.8
3,056,856	+		PGA1_c29200	0.26	+2.5
3,056,967	+		PGA1_c29200	0.41	-0.9
3,056,975	-		PGA1_c29200	0.42	-0.1
3,056,975	-		PGA1_c29200	0.42	-0.7
3,056,979	+		PGA1_c29200	0.43	+0.3
3,057,049	+		PGA1_c29200	0.53	+0.9
3,057,055	-		PGA1_c29200	0.54	+0.9
3,057,080	+		PGA1_c29200	0.57	-0.3
3,057,080	+		PGA1_c29200	0.57	+0.9
3,057,119	-		PGA1_c29200	0.62	-0.1
3,057,138	-		PGA1_c29200	0.65	-2.4
3,057,187	+		PGA1_c29200	0.72	-0.5
3,057,206	-		PGA1_c29200	0.74	-1.7
3,057,261	+		PGA1_c29200	0.82	+0.2
3,057,316	-		PGA1_c29200	0.90	-1.8
3,057,332	-				-0.3
3,057,424	+				+0.8
3,057,424	+				-0.8
3,057,424	+				-1.4
3,057,424	+				-0.2
3,057,424	+				-0.4
3,057,424	+				-0.8
3,057,424	+				+0.5
3,057,425	+				-2.2
3,057,432	-				+0.7
3,057,432	-				+1.1
3,057,433	-				+0.5
3,057,443	-				+0.5
3,057,454	+				+0.1
3,057,531	-		PGA1_c29210	0.13	-1.3
3,057,531	-		PGA1_c29210	0.13	-0.3
3,057,595	+		PGA1_c29210	0.22	+1.1
3,057,595	+		PGA1_c29210	0.22	-0.9
3,057,655	-		PGA1_c29210	0.31	-1.2
3,057,674	-		PGA1_c29210	0.33	-0.8
3,057,676	-		PGA1_c29210	0.34	+2.0
3,057,679	-		PGA1_c29210	0.34	-0.1
3,057,680	+		PGA1_c29210	0.34	+0.4
3,057,680	+		PGA1_c29210	0.34	+1.4
3,057,688	-		PGA1_c29210	0.35	-0.8
3,057,688	-		PGA1_c29210	0.35	+2.2
3,057,688	-		PGA1_c29210	0.35	-0.7
3,057,688	-		PGA1_c29210	0.35	-1.5
3,057,688	-		PGA1_c29210	0.35	+0.6
3,057,693	-		PGA1_c29210	0.36	-0.4
3,057,726	+		PGA1_c29210	0.41	-0.3
3,057,758	+		PGA1_c29210	0.45	-0.2
3,057,759	+		PGA1_c29210	0.45	-2.0
3,057,783	+		PGA1_c29210	0.49	+0.4
3,057,817	-		PGA1_c29210	0.54	-1.0
3,057,958	+		PGA1_c29210	0.74	+0.5
3,057,963	+		PGA1_c29210	0.75	-0.9
3,057,968	+		PGA1_c29210	0.75	+0.5
3,057,971	-		PGA1_c29210	0.76	+1.0
3,057,973	+		PGA1_c29210	0.76	-0.5
3,058,031	-		PGA1_c29210	0.84	-1.3
3,058,177	+				-1.8
3,058,177	+				+0.8
3,058,185	-				-0.8
3,058,226	+				+0.8
3,058,283	+		PGA1_c29220	0.15	+1.0
3,058,307	+		PGA1_c29220	0.18	+0.7
3,058,442	+		PGA1_c29220	0.32	+0.2
3,058,475	-		PGA1_c29220	0.36	+1.5
3,058,483	-		PGA1_c29220	0.37	+0.0
3,058,483	-		PGA1_c29220	0.37	-0.1
3,058,483	-		PGA1_c29220	0.37	+1.0
3,058,543	+		PGA1_c29220	0.43	-0.5
3,058,543	+		PGA1_c29220	0.43	+0.6
3,058,551	+		PGA1_c29220	0.44	+0.3
3,058,551	-		PGA1_c29220	0.44	+0.6
3,058,551	-		PGA1_c29220	0.44	+0.2
3,058,558	-		PGA1_c29220	0.45	-0.9
3,058,559	-		PGA1_c29220	0.45	-0.2
3,058,601	+		PGA1_c29220	0.49	-0.6
3,058,601	+		PGA1_c29220	0.49	+0.1
3,058,601	+		PGA1_c29220	0.49	+1.5
3,058,609	-		PGA1_c29220	0.50	+1.2
3,058,628	-		PGA1_c29220	0.52	-0.2
3,058,673	-		PGA1_c29220	0.57	+0.3
3,058,673	-		PGA1_c29220	0.57	-1.3
3,058,673	-		PGA1_c29220	0.57	+1.1
3,058,691	-		PGA1_c29220	0.59	-0.8
3,058,706	+		PGA1_c29220	0.61	-0.2
3,058,708	+		PGA1_c29220	0.61	+1.0
3,058,714	-		PGA1_c29220	0.61	-0.0
3,058,714	-		PGA1_c29220	0.61	+0.6
3,058,714	-		PGA1_c29220	0.61	-0.6
3,058,749	-		PGA1_c29220	0.65	+0.8
3,058,780	+		PGA1_c29220	0.69	-2.3
3,058,780	+		PGA1_c29220	0.69	-0.7
3,058,780	+		PGA1_c29220	0.69	+0.5
3,058,780	+		PGA1_c29220	0.69	-0.8
3,058,788	-		PGA1_c29220	0.69	+1.0
3,058,872	+		PGA1_c29220	0.79	+0.1
3,058,872	+		PGA1_c29220	0.79	+0.2
3,058,875	-		PGA1_c29220	0.79	+1.1
3,058,880	-		PGA1_c29220	0.79	-0.1
3,058,880	-		PGA1_c29220	0.79	-0.2
3,058,880	-		PGA1_c29220	0.79	-0.3
3,058,880	-		PGA1_c29220	0.79	-1.8
3,058,880	-		PGA1_c29220	0.79	-2.3
3,058,880	-		PGA1_c29220	0.79	-0.5
3,058,950	+		PGA1_c29220	0.87	-0.1
3,058,958	-		PGA1_c29220	0.88	+0.0
3,058,958	-		PGA1_c29220	0.88	+0.9
3,058,975	+		PGA1_c29220	0.90	+0.2
3,059,050	-				-0.6
3,059,055	+				-0.5
3,059,055	+				-3.0
3,059,065	+				-0.3
3,059,065	+				+1.0
3,059,065	+				+1.2
3,059,065	+				+0.2
3,059,065	+				+1.6
3,059,065	+				+0.6
3,059,065	+				-0.1
3,059,065	+				+1.0
3,059,065	+				+0.3
3,059,065	+				-2.0
3,059,065	+				+0.4
3,059,065	+				+0.1
3,059,073	-				+0.1
3,059,073	-				+0.0
3,059,073	-				-1.2
3,059,073	-				+0.3
3,059,073	-				+0.5
3,059,073	-				-0.8
3,059,073	-				-0.2
3,059,073	-				+0.8
3,059,073	-				+0.5
3,059,073	-				+0.5
3,059,073	-				+0.0
3,059,073	-				-0.8
3,059,073	-				-0.4
3,059,073	-				-3.2
3,059,073	-				-0.5
3,059,073	-				+0.2
3,059,080	+				-0.7
3,059,080	-				+0.5
3,059,086	-				+1.2