Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11670

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,207,481	+		PGA1_c11660	0.57	+0.1
1,207,481	+		PGA1_c11660	0.57	-0.5
1,207,481	+		PGA1_c11660	0.57	+0.5
1,207,481	+		PGA1_c11660	0.57	+0.2
1,207,481	+		PGA1_c11660	0.57	+2.5
1,207,481	+		PGA1_c11660	0.57	+1.1
1,207,481	+		PGA1_c11660	0.57	+0.9
1,207,481	+		PGA1_c11660	0.57	+1.5
1,207,481	+		PGA1_c11660	0.57	+0.5
1,207,489	-		PGA1_c11660	0.57	+0.0
1,207,489	-		PGA1_c11660	0.57	+0.9
1,207,489	-		PGA1_c11660	0.57	+1.3
1,207,489	-		PGA1_c11660	0.57	+0.4
1,207,519	+		PGA1_c11660	0.59	-0.4
1,207,519	+		PGA1_c11660	0.59	-1.1
1,207,519	+		PGA1_c11660	0.59	+1.0
1,207,524	+		PGA1_c11660	0.59	+0.7
1,207,527	-		PGA1_c11660	0.59	+0.7
1,207,527	-		PGA1_c11660	0.59	+0.6
1,207,529	+		PGA1_c11660	0.59	-0.0
1,207,537	-		PGA1_c11660	0.59	+0.7
1,207,731	+		PGA1_c11660	0.68	-1.1
1,207,731	+		PGA1_c11660	0.68	-0.4
1,207,775	+		PGA1_c11660	0.70	+0.3
1,207,780	+		PGA1_c11660	0.70	-0.8
1,207,919	+		PGA1_c11660	0.76	+0.0
1,207,932	+		PGA1_c11660	0.77	-0.5
1,207,940	-		PGA1_c11660	0.77	+1.0
1,208,022	-		PGA1_c11660	0.81	+1.3
1,208,030	+		PGA1_c11660	0.81	+0.5
1,208,204	+		PGA1_c11660	0.88	-0.3
1,208,222	+		PGA1_c11660	0.89	-0.5
1,208,231	-		PGA1_c11660	0.90	+0.5
1,208,231	-		PGA1_c11660	0.90	-1.7
1,208,369	-				-0.3
1,208,408	+				-1.0
1,208,444	-				-0.6
1,208,471	-				-0.9
1,208,471	-				+0.8
1,208,675	+		PGA1_c11670	0.19	-2.3
1,208,766	+		PGA1_c11670	0.27	-0.8
1,208,810	+		PGA1_c11670	0.31	-2.0
1,208,861	+		PGA1_c11670	0.35	-0.9
1,208,940	+		PGA1_c11670	0.42	-0.8
1,208,945	+		PGA1_c11670	0.42	-1.0
1,208,948	-		PGA1_c11670	0.42	-1.7
1,209,118	-		PGA1_c11670	0.57	-2.0
1,209,152	+		PGA1_c11670	0.59	-0.6
1,209,189	+		PGA1_c11670	0.63	+0.9
1,209,228	+		PGA1_c11670	0.66	-1.8
1,209,236	-		PGA1_c11670	0.66	-1.3
1,209,237	-		PGA1_c11670	0.67	-1.5
1,209,238	+		PGA1_c11670	0.67	-0.8
1,209,246	-		PGA1_c11670	0.67	-0.5
1,209,295	+		PGA1_c11670	0.71	-0.5
1,209,300	+		PGA1_c11670	0.72	-1.3
1,209,308	-		PGA1_c11670	0.73	-1.5
1,209,308	-		PGA1_c11670	0.73	-1.9
1,209,308	-		PGA1_c11670	0.73	-0.7
1,209,347	+		PGA1_c11670	0.76	-2.1
1,209,355	-		PGA1_c11670	0.77	-1.2
1,209,388	-		PGA1_c11670	0.79	-0.7
1,209,392	-		PGA1_c11670	0.80	-1.1
1,209,527	+				-2.2
1,209,560	+				+2.9
1,209,560	+				+2.3
1,209,560	+				-0.4
1,209,568	-				-1.7
1,209,568	-				-1.7
1,209,641	+				+0.1
1,209,650	-				+1.3
1,209,673	-				-0.2
1,209,707	+				-0.8
1,209,707	+				+0.8
1,209,707	+				-0.5
1,209,708	+				-1.3
1,209,712	+				-0.2
1,209,717	+				-0.9
1,209,717	+				+0.8
1,209,717	+				-1.3
1,209,725	-				-2.0
1,209,751	+				-0.8
1,209,759	-				+0.6
1,209,810	+				+1.2
1,209,890	-				-0.7
1,209,890	-				-0.9
1,209,919	+				-2.3
1,209,927	+				-0.1
1,209,927	+				-1.1
1,209,932	+				+0.1
1,209,950	+				-0.2
1,209,950	+				+0.3
1,209,983	+				+0.5
1,209,995	+				+0.5
1,210,031	-				+0.5
1,210,033	+				-0.4
1,210,033	+				+0.6
1,210,079	-				-0.1
1,210,104	+				+2.3
1,210,184	-				-2.0
1,210,195	+				+1.1
1,210,198	-				-1.0
1,210,198	-				-0.8
1,210,198	-				-1.0
1,210,198	-				+0.1
1,210,213	+				-0.6
1,210,241	+				-1.0
1,210,251	+				-1.8
1,210,251	+				+0.6
1,210,251	+				+0.4
1,210,251	+				-0.0
1,210,259	-				-0.3
1,210,259	-				+0.7
1,210,259	-				+1.5
1,210,259	-				-0.3
1,210,259	-				-0.8
1,210,259	-				-0.7
1,210,269	-				+1.1
1,210,271	+				-0.2
1,210,295	+				-0.0
1,210,295	+				+1.3
1,210,303	-				-0.7
1,210,307	+				-1.6
1,210,307	+				-1.7
1,210,307	+				-0.9
1,210,307	+				-0.2
1,210,314	-				+0.3
1,210,315	-				-0.3
1,210,316	-				+0.9
1,210,321	-				-0.0
1,210,322	-				+0.1
1,210,337	-				+0.3
1,210,388	+				-1.3
1,210,396	-				-1.4
1,210,398	+				-0.3
1,210,413	+				-0.1
1,210,415	-				+1.1
1,210,421	+				-1.3
1,210,421	+				-0.8
1,210,421	+				+1.6
1,210,516	+				-0.5
1,210,573	+		PGA1_c11680	0.15	-1.2
1,210,573	+		PGA1_c11680	0.15	+1.0
1,210,573	+		PGA1_c11680	0.15	+0.5
1,210,573	+		PGA1_c11680	0.15	-1.8
1,210,581	-		PGA1_c11680	0.16	-1.7
1,210,586	-		PGA1_c11680	0.17	+0.0
1,210,613	+		PGA1_c11680	0.22	-0.3
1,210,615	+		PGA1_c11680	0.22	-1.7
1,210,623	-		PGA1_c11680	0.24	+0.3