Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05985

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
1,338,747	+		PFLU_RS05980	0.38	+0.5
1,338,747	+		PFLU_RS05980	0.38	-0.1
1,338,747	+		PFLU_RS05980	0.38	-1.1
1,338,747	+		PFLU_RS05980	0.38	+1.2
1,338,747	+		PFLU_RS05980	0.38	-0.0
1,338,748	-		PFLU_RS05980	0.38	-0.4
1,338,748	-		PFLU_RS05980	0.38	-1.2
1,338,748	-		PFLU_RS05980	0.38	-0.4
1,338,748	-		PFLU_RS05980	0.38	-0.5
1,338,748	-		PFLU_RS05980	0.38	+0.4
1,338,748	-		PFLU_RS05980	0.38	-1.8
1,338,748	-		PFLU_RS05980	0.38	-0.6
1,338,748	-		PFLU_RS05980	0.38	+0.1
1,338,748	-		PFLU_RS05980	0.38	-0.2
1,338,748	-		PFLU_RS05980	0.38	+1.1
1,338,748	-		PFLU_RS05980	0.38	-0.9
1,338,766	-		PFLU_RS05980	0.40	+0.2
1,338,804	+		PFLU_RS05980	0.42	+0.1
1,338,804	+		PFLU_RS05980	0.42	+0.7
1,338,804	+		PFLU_RS05980	0.42	+0.0
1,338,804	+		PFLU_RS05980	0.42	+0.0
1,338,931	+		PFLU_RS05980	0.51	+0.9
1,338,931	+		PFLU_RS05980	0.51	-0.0
1,338,931	+		PFLU_RS05980	0.51	-1.2
1,338,932	-		PFLU_RS05980	0.51	-0.3
1,338,979	+		PFLU_RS05980	0.55	-0.4
1,338,979	+		PFLU_RS05980	0.55	+0.1
1,338,979	+		PFLU_RS05980	0.55	+0.8
1,338,979	+		PFLU_RS05980	0.55	+2.2
1,338,980	-		PFLU_RS05980	0.55	-0.8
1,338,980	-		PFLU_RS05980	0.55	+0.6
1,338,980	-		PFLU_RS05980	0.55	-0.4
1,338,980	-		PFLU_RS05980	0.55	-1.7
1,338,980	-		PFLU_RS05980	0.55	-1.0
1,339,055	-		PFLU_RS05980	0.60	+0.7
1,339,123	+		PFLU_RS05980	0.65	+0.6
1,339,123	+		PFLU_RS05980	0.65	+0.6
1,339,123	+		PFLU_RS05980	0.65	-1.5
1,339,123	+		PFLU_RS05980	0.65	+0.5
1,339,123	+		PFLU_RS05980	0.65	-0.4
1,339,124	-		PFLU_RS05980	0.65	-0.1
1,339,124	-		PFLU_RS05980	0.65	-0.7
1,339,124	-		PFLU_RS05980	0.65	+0.8
1,339,124	-		PFLU_RS05980	0.65	-0.2
1,339,176	+		PFLU_RS05980	0.68	-0.5
1,339,176	+		PFLU_RS05980	0.68	+0.1
1,339,177	-		PFLU_RS05980	0.69	-0.5
1,339,177	-		PFLU_RS05980	0.69	-0.8
1,339,248	+		PFLU_RS05980	0.74	-0.2
1,339,248	+		PFLU_RS05980	0.74	-0.1
1,339,248	+		PFLU_RS05980	0.74	-0.2
1,339,249	-		PFLU_RS05980	0.74	-1.1
1,339,249	-		PFLU_RS05980	0.74	-0.5
1,339,249	-		PFLU_RS05980	0.74	+0.7
1,339,249	-		PFLU_RS05980	0.74	-1.9
1,339,249	-		PFLU_RS05980	0.74	+0.5
1,339,347	+		PFLU_RS05980	0.80	-0.8
1,339,347	+		PFLU_RS05980	0.80	-0.8
1,339,347	+		PFLU_RS05980	0.80	-1.2
1,339,348	-		PFLU_RS05980	0.81	-0.3
1,339,348	-		PFLU_RS05980	0.81	+0.4
1,339,348	-		PFLU_RS05980	0.81	-1.4
1,339,539	-				+0.2
1,339,563	-				-0.6
1,339,611	-				-0.5
1,339,611	-				-0.0
1,339,611	-				-0.2
1,339,644	+				+0.8
1,339,644	+				-0.1
1,339,644	+				+1.8
1,339,644	+				+1.5
1,339,644	+				+0.7
1,339,644	+				-0.2
1,339,644	+				+0.1
1,339,644	+				+1.0
1,339,644	+				-0.4
1,339,645	-				+0.2
1,339,645	-				+0.1
1,339,645	-				-0.8
1,339,645	-				+0.1
1,339,645	-				+1.0
1,339,645	-				+0.7
1,339,645	-				+0.6
1,339,645	-				-1.1
1,339,645	-				-0.0
1,339,645	-				-0.9
1,339,645	-				+0.2
1,339,645	-				+0.5
1,339,645	-				+0.3
1,339,650	+				+0.5
1,339,651	-				+0.4
1,339,651	-				-0.7
1,339,651	-				+0.8
1,339,651	-				-0.4
1,339,651	-				-0.5
1,339,651	-				-0.4
1,339,662	+				-1.1
1,339,662	+				-1.6
1,339,662	+				+0.6
1,339,662	+				-0.5
1,339,662	+				-0.7
1,339,662	+				-0.5
1,339,662	+				-0.5
1,339,662	+				-1.1
1,339,662	+				+0.2
1,339,662	+				-0.3
1,339,662	+				+0.6
1,339,662	+				+0.7
1,339,663	-				-0.2
1,339,663	-				-0.2
1,339,673	+				-0.0
1,339,673	+				+0.7
1,339,674	-				+0.5
1,339,674	-				-1.1
1,339,674	-				+0.2
1,339,733	+				+0.2
1,339,733	+				+1.2
1,339,733	+				+0.9
1,339,733	+				+0.4
1,339,733	+				+0.5
1,339,733	+				+0.5
1,339,734	-				-0.0
1,339,734	-				+1.5
1,339,734	-				-2.3
1,339,734	-				+0.4
1,339,734	-				-0.7
1,339,734	-				+0.5
1,339,734	-				-0.5
1,339,734	-				-0.2
1,339,734	-				+0.6
1,339,734	-				+0.8
1,339,737	+				-0.7
1,339,778	+				+0.3
1,339,778	+				-0.5
1,339,778	+				-0.2
1,339,778	+				-0.5
1,339,778	+				+0.2
1,339,778	+				-0.6
1,339,779	-				-0.1
1,339,779	-				-0.5
1,339,779	-				+0.8
1,339,779	-				-0.3
1,339,781	+				+0.3
1,339,781	+				-1.2
1,339,781	+				-0.3
1,339,781	+				+0.2
1,339,781	+				+1.4
1,339,782	-				+0.7
1,339,782	-				+0.0
1,339,864	+		PFLU_RS05985	0.16	+0.7
1,339,865	-		PFLU_RS05985	0.16	-0.4
1,340,003	+		PFLU_RS05985	0.33	+0.6
1,340,003	+		PFLU_RS05985	0.33	-0.7
1,340,003	+		PFLU_RS05985	0.33	-2.4
1,340,003	+		PFLU_RS05985	0.33	-0.3
1,340,004	-		PFLU_RS05985	0.34	+1.4
1,340,004	-		PFLU_RS05985	0.34	-0.1
1,340,004	-		PFLU_RS05985	0.34	-0.2
1,340,096	+		PFLU_RS05985	0.45	-1.5
1,340,096	+		PFLU_RS05985	0.45	-0.2
1,340,096	+		PFLU_RS05985	0.45	-0.3
1,340,097	-		PFLU_RS05985	0.45	+1.0
1,340,271	-		PFLU_RS05985	0.67	-0.5
1,340,450	+		PFLU_RS05985	0.89	-1.0
1,340,450	+		PFLU_RS05985	0.89	-0.3
1,340,451	-		PFLU_RS05985	0.89	-0.5
1,340,451	-		PFLU_RS05985	0.89	-0.7
1,340,451	-		PFLU_RS05985	0.89	+0.1
1,340,574	+				-0.4
1,340,574	+				-0.4
1,340,574	+				+0.7
1,340,574	+				+1.1
1,340,574	+				-0.0
1,340,574	+				-0.2
1,340,574	+				+0.2
1,340,575	-				+0.8
1,340,575	-				-0.9
1,340,575	-				-0.3
1,340,626	+		PFLU_RS05990	0.10	-0.7
1,340,627	-		PFLU_RS05990	0.10	-2.0
1,340,627	-		PFLU_RS05990	0.10	-0.3
1,340,627	-		PFLU_RS05990	0.10	-0.5
1,340,627	-		PFLU_RS05990	0.10	-0.9
1,340,652	+		PFLU_RS05990	0.13	-0.3
1,340,652	+		PFLU_RS05990	0.13	+0.7
1,340,652	+		PFLU_RS05990	0.13	+0.0
1,340,653	-		PFLU_RS05990	0.13	+0.9
1,340,673	+		PFLU_RS05990	0.15	-1.3
1,340,673	+		PFLU_RS05990	0.15	-0.8
1,340,674	-		PFLU_RS05990	0.15	-0.5
1,340,674	-		PFLU_RS05990	0.15	-0.3
1,340,674	-		PFLU_RS05990	0.15	+1.3
1,340,786	-		PFLU_RS05990	0.27	+0.2
1,340,786	-		PFLU_RS05990	0.27	-2.0
1,340,893	+		PFLU_RS05990	0.39	-1.0
1,340,893	+		PFLU_RS05990	0.39	+1.6
1,340,893	+		PFLU_RS05990	0.39	+1.8
1,340,893	+		PFLU_RS05990	0.39	+0.7
1,340,893	+		PFLU_RS05990	0.39	+1.1
1,340,894	-		PFLU_RS05990	0.39	+1.3
1,340,894	-		PFLU_RS05990	0.39	-1.5
1,340,895	+		PFLU_RS05990	0.39	+0.8
1,340,895	+		PFLU_RS05990	0.39	+0.1
1,340,895	+		PFLU_RS05990	0.39	-0.4
1,340,895	+		PFLU_RS05990	0.39	+0.1
1,340,895	+		PFLU_RS05990	0.39	+0.1
1,340,895	+		PFLU_RS05990	0.39	-0.1
1,340,895	+		PFLU_RS05990	0.39	+1.1
1,340,895	+		PFLU_RS05990	0.39	+1.1
1,340,895	+		PFLU_RS05990	0.39	+0.5
1,340,895	+		PFLU_RS05990	0.39	-0.5
1,340,895	+		PFLU_RS05990	0.39	+1.1
1,340,895	+		PFLU_RS05990	0.39	+0.0
1,340,895	+		PFLU_RS05990	0.39	-0.1
1,340,895	+		PFLU_RS05990	0.39	-1.0
1,340,896	-		PFLU_RS05990	0.39	+0.9
1,340,896	-		PFLU_RS05990	0.39	+0.4
1,340,896	-		PFLU_RS05990	0.39	+0.3
1,340,896	-		PFLU_RS05990	0.39	-0.3
1,340,896	-		PFLU_RS05990	0.39	+0.4
1,340,896	-		PFLU_RS05990	0.39	-0.1
1,340,896	-		PFLU_RS05990	0.39	-0.4
1,340,896	-		PFLU_RS05990	0.39	-0.1
1,340,896	-		PFLU_RS05990	0.39	-0.7
1,340,896	-		PFLU_RS05990	0.39	-1.5
1,340,896	-		PFLU_RS05990	0.39	-0.1
1,341,051	+		PFLU_RS05990	0.56	-0.6
1,341,051	+		PFLU_RS05990	0.56	-0.4
1,341,051	+		PFLU_RS05990	0.56	-0.2
1,341,051	+		PFLU_RS05990	0.56	+0.7
1,341,051	+		PFLU_RS05990	0.56	-1.7
1,341,052	-		PFLU_RS05990	0.56	-1.2
1,341,052	-		PFLU_RS05990	0.56	+1.3
1,341,066	+		PFLU_RS05990	0.58	+0.5
1,341,066	+		PFLU_RS05990	0.58	+0.2
1,341,066	+		PFLU_RS05990	0.58	+0.0
1,341,066	+		PFLU_RS05990	0.58	-2.6
1,341,066	+		PFLU_RS05990	0.58	+0.0
1,341,066	+		PFLU_RS05990	0.58	-1.1
1,341,066	+		PFLU_RS05990	0.58	-0.5
1,341,066	+		PFLU_RS05990	0.58	+0.8
1,341,067	-		PFLU_RS05990	0.58	+1.1
1,341,067	-		PFLU_RS05990	0.58	-0.1
1,341,067	-		PFLU_RS05990	0.58	+0.2
1,341,067	-		PFLU_RS05990	0.58	+0.2
1,341,067	-		PFLU_RS05990	0.58	-0.7
1,341,067	-		PFLU_RS05990	0.58	-0.1
1,341,067	-		PFLU_RS05990	0.58	-1.0
1,341,067	-		PFLU_RS05990	0.58	+0.5
1,341,067	-		PFLU_RS05990	0.58	-0.5
1,341,099	+		PFLU_RS05990	0.61	-0.0
1,341,099	+		PFLU_RS05990	0.61	+0.2
1,341,099	+		PFLU_RS05990	0.61	+0.4
1,341,099	+		PFLU_RS05990	0.61	-1.1
1,341,099	+		PFLU_RS05990	0.61	+0.5
1,341,099	+		PFLU_RS05990	0.61	-0.5
1,341,099	+		PFLU_RS05990	0.61	+0.2
1,341,099	+		PFLU_RS05990	0.61	-0.4
1,341,099	+		PFLU_RS05990	0.61	-1.2
1,341,099	+		PFLU_RS05990	0.61	-0.4
1,341,099	+		PFLU_RS05990	0.61	+0.4
1,341,099	+		PFLU_RS05990	0.61	-1.8
1,341,099	+		PFLU_RS05990	0.61	-0.3
1,341,099	+		PFLU_RS05990	0.61	+0.5
1,341,099	+		PFLU_RS05990	0.61	-0.3
1,341,099	+		PFLU_RS05990	0.61	-0.2
1,341,099	+		PFLU_RS05990	0.61	-0.9
1,341,100	-		PFLU_RS05990	0.61	+0.5
1,341,100	-		PFLU_RS05990	0.61	-0.1
1,341,100	-		PFLU_RS05990	0.61	+0.7
1,341,100	-		PFLU_RS05990	0.61	-1.2
1,341,100	-		PFLU_RS05990	0.61	+0.5
1,341,100	-		PFLU_RS05990	0.61	-1.2
1,341,100	-		PFLU_RS05990	0.61	-0.0
1,341,100	-		PFLU_RS05990	0.61	+1.6
1,341,130	-		PFLU_RS05990	0.64	-1.9
1,341,130	-		PFLU_RS05990	0.64	-0.2
1,341,141	+		PFLU_RS05990	0.66	-0.9
1,341,141	+		PFLU_RS05990	0.66	-0.6
1,341,141	+		PFLU_RS05990	0.66	+0.1
1,341,141	+		PFLU_RS05990	0.66	-0.7
1,341,141	+		PFLU_RS05990	0.66	-1.4
1,341,141	+		PFLU_RS05990	0.66	-0.8
1,341,141	+		PFLU_RS05990	0.66	-0.2
1,341,141	+		PFLU_RS05990	0.66	+0.8
1,341,141	+		PFLU_RS05990	0.66	-0.2
1,341,141	+		PFLU_RS05990	0.66	+1.8
1,341,141	+		PFLU_RS05990	0.66	-1.1
1,341,141	+		PFLU_RS05990	0.66	-0.6
1,341,141	+		PFLU_RS05990	0.66	+0.2
1,341,141	+		PFLU_RS05990	0.66	-0.1
1,341,141	+		PFLU_RS05990	0.66	+0.2
1,341,141	+		PFLU_RS05990	0.66	-0.8
1,341,141	+		PFLU_RS05990	0.66	-1.3
1,341,141	+		PFLU_RS05990	0.66	+0.6
1,341,141	+		PFLU_RS05990	0.66	-0.1
1,341,141	+		PFLU_RS05990	0.66	+0.2
1,341,141	+		PFLU_RS05990	0.66	+0.2
1,341,141	+		PFLU_RS05990	0.66	-0.2
1,341,141	+		PFLU_RS05990	0.66	-0.6
1,341,141	+		PFLU_RS05990	0.66	+1.1
1,341,141	+		PFLU_RS05990	0.66	-0.6
1,341,141	+		PFLU_RS05990	0.66	+0.3
1,341,141	+		PFLU_RS05990	0.66	+0.4
1,341,141	+		PFLU_RS05990	0.66	-1.2
1,341,141	+		PFLU_RS05990	0.66	-0.1
1,341,141	+		PFLU_RS05990	0.66	-0.1
1,341,142	-		PFLU_RS05990	0.66	-0.0
1,341,142	-		PFLU_RS05990	0.66	+0.9
1,341,142	-		PFLU_RS05990	0.66	+0.6
1,341,142	-		PFLU_RS05990	0.66	-1.5
1,341,142	-		PFLU_RS05990	0.66	+0.4
1,341,142	-		PFLU_RS05990	0.66	+0.3
1,341,142	-		PFLU_RS05990	0.66	+1.0
1,341,142	-		PFLU_RS05990	0.66	+0.2
1,341,142	-		PFLU_RS05990	0.66	+1.8
1,341,142	-		PFLU_RS05990	0.66	+0.1
1,341,142	-		PFLU_RS05990	0.66	-0.0
1,341,142	-		PFLU_RS05990	0.66	+0.5
1,341,142	-		PFLU_RS05990	0.66	-1.3
1,341,142	-		PFLU_RS05990	0.66	+0.2
1,341,142	-		PFLU_RS05990	0.66	-0.3
1,341,144	+		PFLU_RS05990	0.66	-0.3
1,341,144	+		PFLU_RS05990	0.66	+1.1
1,341,145	-		PFLU_RS05990	0.66	-0.8
1,341,145	-		PFLU_RS05990	0.66	-0.7
1,341,301	+		PFLU_RS05990	0.83	-0.8
1,341,301	+		PFLU_RS05990	0.83	+0.1
1,341,301	+		PFLU_RS05990	0.83	+0.4
1,341,301	+		PFLU_RS05990	0.83	-0.1
1,341,302	-		PFLU_RS05990	0.83	+1.8
1,341,302	-		PFLU_RS05990	0.83	-1.7
1,341,302	-		PFLU_RS05990	0.83	+1.2
1,341,302	-		PFLU_RS05990	0.83	-0.2
1,341,303	+		PFLU_RS05990	0.83	+0.1
1,341,303	+		PFLU_RS05990	0.83	-0.2
1,341,303	+		PFLU_RS05990	0.83	+1.1
1,341,303	+		PFLU_RS05990	0.83	-0.7
1,341,303	+		PFLU_RS05990	0.83	-0.3
1,341,303	+		PFLU_RS05990	0.83	+0.1
1,341,304	-		PFLU_RS05990	0.83	+0.3
1,341,304	-		PFLU_RS05990	0.83	+0.5
1,341,304	-		PFLU_RS05990	0.83	-1.3
1,341,304	-		PFLU_RS05990	0.83	+0.5
1,341,304	-		PFLU_RS05990	0.83	+0.2
1,341,304	-		PFLU_RS05990	0.83	-0.0
1,341,342	+		PFLU_RS05990	0.87	+0.2
1,341,342	+		PFLU_RS05990	0.87	-0.1
1,341,342	+		PFLU_RS05990	0.87	+0.0
1,341,342	+		PFLU_RS05990	0.87	-0.9
1,341,343	-		PFLU_RS05990	0.87	-0.0
1,341,343	-		PFLU_RS05990	0.87	-1.2
1,341,343	-		PFLU_RS05990	0.87	-0.6
1,341,343	-		PFLU_RS05990	0.87	-0.9
1,341,343	-		PFLU_RS05990	0.87	-0.5
1,341,343	-		PFLU_RS05990	0.87	-0.2
1,341,390	+				+0.2
1,341,391	-				+0.1
1,341,391	-				-0.0
1,341,413	+				+1.1
1,341,413	+				-0.5
1,341,413	+				-0.1
1,341,413	+				-0.1
1,341,413	+				-0.7
1,341,413	+				-0.3
1,341,413	+				-0.4
1,341,413	+				-0.4
1,341,413	+				+0.9
1,341,413	+				+1.0
1,341,413	+				-0.6
1,341,413	+				+0.2
1,341,413	+				-0.0
1,341,413	+				-0.9
1,341,414	-				+0.4
1,341,414	-				+1.0
1,341,414	-				-0.0
1,341,414	-				+0.7
1,341,414	-				-0.0
1,341,414	-				+1.8
1,341,414	-				+0.7
1,341,414	-				-1.3
1,341,414	-				-0.7
1,341,414	-				+0.1
1,341,414	-				+0.9
1,341,414	-				+0.6
1,341,414	-				-0.0
1,341,414	-				-0.8
1,341,414	-				+0.5