Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16060

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
3,393,896	+				+0.2
3,393,897	-				+0.0
3,393,897	-				+0.7
3,393,962	-				+0.4
3,393,962	-				+0.4
3,394,153	+		ABZR87_RS16055	0.35	+1.6
3,394,153	+		ABZR87_RS16055	0.35	-0.6
3,394,153	+		ABZR87_RS16055	0.35	-0.3
3,394,154	-		ABZR87_RS16055	0.35	-0.7
3,394,154	-		ABZR87_RS16055	0.35	-0.9
3,394,154	-		ABZR87_RS16055	0.35	-1.4
3,394,281	+		ABZR87_RS16055	0.55	-0.0
3,394,281	+		ABZR87_RS16055	0.55	+0.2
3,394,281	+		ABZR87_RS16055	0.55	+0.6
3,394,281	+		ABZR87_RS16055	0.55	-0.6
3,394,282	-		ABZR87_RS16055	0.55	-0.9
3,394,282	-		ABZR87_RS16055	0.55	+0.2
3,394,282	-		ABZR87_RS16055	0.55	-1.2
3,394,282	-		ABZR87_RS16055	0.55	-0.2
3,394,282	-		ABZR87_RS16055	0.55	-0.3
3,394,282	-		ABZR87_RS16055	0.55	+0.8
3,394,282	-		ABZR87_RS16055	0.55	+0.4
3,394,317	+		ABZR87_RS16055	0.60	+0.9
3,394,329	+		ABZR87_RS16055	0.62	-0.7
3,394,329	+		ABZR87_RS16055	0.62	+1.0
3,394,330	-		ABZR87_RS16055	0.62	-1.1
3,394,330	-		ABZR87_RS16055	0.62	-0.1
3,394,500	+		ABZR87_RS16055	0.89	-2.1
3,394,500	+		ABZR87_RS16055	0.89	+0.9
3,394,500	+		ABZR87_RS16055	0.89	-0.2
3,394,501	-		ABZR87_RS16055	0.89	-1.0
3,394,501	-		ABZR87_RS16055	0.89	-1.3
3,394,573	+				-0.9
3,394,573	+				-0.2
3,394,574	-				-0.3
3,394,574	-				+0.0
3,394,574	-				+0.6
3,394,604	+				+0.5
3,394,604	+				-0.8
3,394,604	+				+0.8
3,394,605	-				+1.6
3,394,652	-				-0.1
3,394,790	-				-1.0
3,394,790	-				-1.7
3,394,818	+				-0.7
3,394,819	-				-1.2
3,394,896	+				-1.9
3,395,008	-		ABZR87_RS16060	0.13	-1.2
3,395,008	-		ABZR87_RS16060	0.13	+1.6
3,395,115	+		ABZR87_RS16060	0.18	-1.3
3,395,115	+		ABZR87_RS16060	0.18	+0.1
3,395,115	+		ABZR87_RS16060	0.18	+0.6
3,395,529	+		ABZR87_RS16060	0.36	-0.9
3,395,529	+		ABZR87_RS16060	0.36	-0.5
3,395,625	+		ABZR87_RS16060	0.40	-0.8
3,395,625	+		ABZR87_RS16060	0.40	+0.8
3,395,625	+		ABZR87_RS16060	0.40	+0.2
3,395,625	+		ABZR87_RS16060	0.40	-1.2
3,395,625	+		ABZR87_RS16060	0.40	-3.0
3,395,625	+		ABZR87_RS16060	0.40	-2.2
3,395,625	+		ABZR87_RS16060	0.40	-3.0
3,395,626	-		ABZR87_RS16060	0.40	-1.1
3,395,626	-		ABZR87_RS16060	0.40	+0.2
3,395,626	-		ABZR87_RS16060	0.40	+0.6
3,395,626	-		ABZR87_RS16060	0.40	-0.5
3,395,626	-		ABZR87_RS16060	0.40	+2.5
3,395,626	-		ABZR87_RS16060	0.40	-0.4
3,395,691	+		ABZR87_RS16060	0.42	+1.6
3,395,691	+		ABZR87_RS16060	0.42	-0.2
3,395,692	-		ABZR87_RS16060	0.43	-0.3
3,395,692	-		ABZR87_RS16060	0.43	+0.3
3,395,692	-		ABZR87_RS16060	0.43	-0.7
3,395,850	+		ABZR87_RS16060	0.49	+0.4
3,395,850	+		ABZR87_RS16060	0.49	-0.4
3,395,922	+		ABZR87_RS16060	0.52	-2.1
3,395,922	+		ABZR87_RS16060	0.52	+0.0
3,396,025	+		ABZR87_RS16060	0.57	-2.1
3,396,025	+		ABZR87_RS16060	0.57	+0.3
3,396,025	+		ABZR87_RS16060	0.57	-0.4
3,396,026	-		ABZR87_RS16060	0.57	-2.3
3,396,026	-		ABZR87_RS16060	0.57	+1.7
3,396,026	-		ABZR87_RS16060	0.57	-1.1
3,396,131	-		ABZR87_RS16060	0.61	-1.4
3,396,526	+		ABZR87_RS16060	0.78	-0.9
3,396,526	+		ABZR87_RS16060	0.78	-0.5
3,396,612	+		ABZR87_RS16060	0.82	+0.2
3,396,612	+		ABZR87_RS16060	0.82	-0.7
3,396,613	-		ABZR87_RS16060	0.82	-1.2
3,396,900	+				-0.3
3,396,900	+				-1.3
3,396,900	+				-0.9
3,396,900	+				-0.5
3,396,901	-				-1.3
3,396,901	-				-0.5
3,396,901	-				-0.1
3,396,901	-				+0.6
3,396,901	-				-0.3
3,396,901	-				-0.1
3,397,104	+				-2.3
3,397,104	+				-1.0
3,397,104	+				-0.7
3,397,104	+				-1.9
3,397,104	+				-0.6
3,397,104	+				-0.0
3,397,105	-				-0.1
3,397,105	-				-0.4
3,397,105	-				+0.3
3,397,121	+				+0.7
3,397,121	+				-0.6
3,397,122	-				+1.6
3,397,122	-				+0.3
3,397,133	-				+0.9
3,397,151	+				-0.7
3,397,181	+				-1.1
3,397,181	+				+1.0
3,397,182	-				-0.3
3,397,182	-				-1.0
3,397,183	+				-0.1
3,397,206	+				-0.1