Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15005

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
3,163,107	+				+1.5
3,163,108	-				+1.0
3,163,108	-				+0.2
3,163,193	-				+1.0
3,163,195	-				+0.4
3,163,209	+				-1.1
3,163,210	-				+0.5
3,163,210	-				-0.0
3,163,210	-				+0.4
3,163,210	-				+0.9
3,163,210	-				-1.0
3,163,395	-		ABZR87_RS15000	0.21	-0.8
3,163,517	+		ABZR87_RS15000	0.38	-0.2
3,163,526	+		ABZR87_RS15000	0.39	+0.1
3,163,526	+		ABZR87_RS15000	0.39	-0.0
3,163,526	+		ABZR87_RS15000	0.39	-0.6
3,163,526	+		ABZR87_RS15000	0.39	-0.6
3,163,527	-		ABZR87_RS15000	0.39	+0.5
3,163,527	-		ABZR87_RS15000	0.39	+0.1
3,163,527	-		ABZR87_RS15000	0.39	+1.6
3,163,527	-		ABZR87_RS15000	0.39	+0.5
3,163,527	-		ABZR87_RS15000	0.39	-0.4
3,163,550	+		ABZR87_RS15000	0.42	-0.2
3,163,550	+		ABZR87_RS15000	0.42	-0.5
3,163,550	+		ABZR87_RS15000	0.42	+0.7
3,163,551	-		ABZR87_RS15000	0.42	+0.7
3,163,745	+		ABZR87_RS15000	0.69	+0.0
3,163,746	-		ABZR87_RS15000	0.69	+0.5
3,163,746	-		ABZR87_RS15000	0.69	+0.2
3,163,785	-		ABZR87_RS15000	0.75	-0.2
3,163,785	-		ABZR87_RS15000	0.75	+0.3
3,163,785	-		ABZR87_RS15000	0.75	-0.0
3,163,830	-		ABZR87_RS15000	0.81	-0.1
3,163,830	-		ABZR87_RS15000	0.81	-0.5
3,163,830	-		ABZR87_RS15000	0.81	-0.3
3,163,856	+		ABZR87_RS15000	0.85	-0.7
3,163,857	-		ABZR87_RS15000	0.85	+0.2
3,163,943	-				-0.7
3,163,981	+				+0.3
3,163,981	+				+0.8
3,163,981	+				-0.1
3,163,982	-				+0.0
3,164,014	+				+1.6
3,164,014	+				+0.3
3,164,015	-				-0.2
3,164,187	+		ABZR87_RS15005	0.38	-0.8
3,164,188	-		ABZR87_RS15005	0.38	-0.1
3,164,188	-		ABZR87_RS15005	0.38	-0.9
3,164,293	+		ABZR87_RS15005	0.56	-1.8
3,164,293	+		ABZR87_RS15005	0.56	+0.6
3,164,293	+		ABZR87_RS15005	0.56	-0.3
3,164,294	-		ABZR87_RS15005	0.57	-0.1
3,164,294	-		ABZR87_RS15005	0.57	-0.6
3,164,377	+		ABZR87_RS15005	0.71	-0.0
3,164,377	+		ABZR87_RS15005	0.71	-0.1
3,164,545	+				-0.7
3,164,546	-				+0.9
3,164,688	+		ABZR87_RS15010	0.22	-0.0
3,164,689	-		ABZR87_RS15010	0.22	+0.7
3,164,729	+		ABZR87_RS15010	0.29	-0.1
3,165,155	-				+0.3
3,165,155	-				+0.7
3,165,164	+				+0.3
3,165,165	-				+1.6
3,165,189	+				+0.7
3,165,190	-				-1.2
3,165,340	+		ABZR87_RS15015	0.38	-0.7
3,165,505	-		ABZR87_RS15015	0.78	-0.1
3,165,505	-		ABZR87_RS15015	0.78	-0.8
3,165,505	-		ABZR87_RS15015	0.78	+0.4