Experiment: Ra3_0.01
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14305 and ABZR87_RS14310 overlap by 4 nucleotides ABZR87_RS14310 and ABZR87_RS14315 are separated by 73 nucleotides
ABZR87_RS14305: ABZR87_RS14305 - acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein, at 3,020,475 to 3,022,355
_RS14305
ABZR87_RS14310: ABZR87_RS14310 - peroxidase-related enzyme, at 3,022,352 to 3,022,942
_RS14310
ABZR87_RS14315: ABZR87_RS14315 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 3,023,016 to 3,025,313
_RS14315
Position (kb)
3022
3023 Strain fitness (log2 ratio)
-2
-1
0
1 at 3021.563 kb on - strand, within ABZR87_RS14305 at 3021.563 kb on - strand, within ABZR87_RS14305 at 3021.563 kb on - strand, within ABZR87_RS14305 at 3021.628 kb on - strand, within ABZR87_RS14305 at 3021.927 kb on + strand, within ABZR87_RS14305 at 3021.928 kb on - strand, within ABZR87_RS14305 at 3021.993 kb on + strand, within ABZR87_RS14305 at 3022.035 kb on + strand, within ABZR87_RS14305 at 3022.036 kb on - strand, within ABZR87_RS14305 at 3022.036 kb on - strand, within ABZR87_RS14305 at 3022.055 kb on + strand, within ABZR87_RS14305 at 3022.496 kb on + strand, within ABZR87_RS14310 at 3022.497 kb on - strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.565 kb on + strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.566 kb on - strand, within ABZR87_RS14310 at 3022.797 kb on + strand, within ABZR87_RS14310 at 3022.863 kb on + strand, within ABZR87_RS14310 at 3022.863 kb on + strand, within ABZR87_RS14310 at 3023.129 kb on + strand at 3023.611 kb on + strand, within ABZR87_RS14315 at 3023.612 kb on - strand, within ABZR87_RS14315 at 3023.726 kb on - strand, within ABZR87_RS14315 at 3023.869 kb on + strand, within ABZR87_RS14315 at 3023.870 kb on - strand, within ABZR87_RS14315 at 3023.870 kb on - strand, within ABZR87_RS14315
Per-strain Table
Position Strand Gene LocusTag Fraction Ra3_0.01 remove 3,021,563 - ABZR87_RS14305 0.58 -0.1 3,021,563 - ABZR87_RS14305 0.58 +0.0 3,021,563 - ABZR87_RS14305 0.58 -0.0 3,021,628 - ABZR87_RS14305 0.61 +0.2 3,021,927 + ABZR87_RS14305 0.77 +0.7 3,021,928 - ABZR87_RS14305 0.77 +0.2 3,021,993 + ABZR87_RS14305 0.81 -0.3 3,022,035 + ABZR87_RS14305 0.83 -0.0 3,022,036 - ABZR87_RS14305 0.83 +0.1 3,022,036 - ABZR87_RS14305 0.83 -0.3 3,022,055 + ABZR87_RS14305 0.84 +0.1 3,022,496 + ABZR87_RS14310 0.24 +0.5 3,022,497 - ABZR87_RS14310 0.25 +0.9 3,022,565 + ABZR87_RS14310 0.36 +0.5 3,022,565 + ABZR87_RS14310 0.36 -0.6 3,022,565 + ABZR87_RS14310 0.36 -0.3 3,022,565 + ABZR87_RS14310 0.36 -0.6 3,022,566 - ABZR87_RS14310 0.36 -0.8 3,022,566 - ABZR87_RS14310 0.36 +0.4 3,022,566 - ABZR87_RS14310 0.36 +0.4 3,022,797 + ABZR87_RS14310 0.75 +0.3 3,022,863 + ABZR87_RS14310 0.86 -0.5 3,022,863 + ABZR87_RS14310 0.86 -2.3 3,023,129 + +0.2 3,023,611 + ABZR87_RS14315 0.26 +0.5 3,023,612 - ABZR87_RS14315 0.26 -0.5 3,023,726 - ABZR87_RS14315 0.31 -0.1 3,023,869 + ABZR87_RS14315 0.37 +0.2 3,023,870 - ABZR87_RS14315 0.37 -0.7 3,023,870 - ABZR87_RS14315 0.37 +0.2
Or see this region's nucleotide sequence