Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13110

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
2,780,846	+				+0.2
2,780,846	+				-0.1
2,780,846	+				-0.5
2,780,846	+				-0.1
2,780,846	+				-0.1
2,780,847	-				+0.7
2,780,887	+				+0.2
2,780,888	-				-0.6
2,780,888	-				-0.2
2,780,888	-				+0.5
2,780,889	+				-0.5
2,780,890	-				-0.0
2,780,890	-				-0.8
2,780,918	+				-0.1
2,780,943	+				+0.0
2,780,943	+				+0.8
2,780,944	-				+1.1
2,780,944	-				-0.5
2,780,945	-				+0.3
2,781,001	+		ABZR87_RS13105	0.22	+0.8
2,781,001	+		ABZR87_RS13105	0.22	+0.4
2,781,001	+		ABZR87_RS13105	0.22	+0.6
2,781,004	-		ABZR87_RS13105	0.23	-0.0
2,781,018	-		ABZR87_RS13105	0.27	+0.0
2,781,070	+		ABZR87_RS13105	0.42	+0.4
2,781,070	+		ABZR87_RS13105	0.42	-0.1
2,781,071	-		ABZR87_RS13105	0.43	+0.2
2,781,095	+		ABZR87_RS13105	0.50	+0.4
2,781,095	+		ABZR87_RS13105	0.50	+0.0
2,781,095	+		ABZR87_RS13105	0.50	+0.3
2,781,095	+		ABZR87_RS13105	0.50	-0.2
2,781,095	+		ABZR87_RS13105	0.50	+0.1
2,781,096	-		ABZR87_RS13105	0.50	-0.1
2,781,096	-		ABZR87_RS13105	0.50	+0.9
2,781,236	+				-0.5
2,781,237	-				-0.3
2,781,280	+				-0.4
2,781,281	-				-0.4
2,781,296	+				+0.6
2,781,296	+				+0.0
2,781,296	+				-0.2
2,781,297	-				+0.4
2,781,384	+				+0.8
2,781,384	+				+0.0
2,781,384	+				-0.7
2,781,488	-				+1.0
2,781,488	-				+0.4
2,781,515	-				+0.0
2,781,534	-				+0.3
2,781,534	-				-0.7
2,781,546	-				+0.1
2,781,546	-				+0.1
2,781,586	-				-0.4
2,781,586	-				+0.6
2,781,586	-				+1.1
2,781,597	-				-0.9
2,781,607	+				+0.1
2,781,607	+				-0.2
2,781,607	+				-0.2
2,781,607	+				-0.2
2,781,607	+				+0.4
2,781,608	-				-0.2
2,781,608	-				+0.2
2,781,608	-				-0.8
2,781,658	+				-1.5
2,781,659	-				+0.1
2,781,659	-				-0.6
2,781,696	+				+0.0
2,781,697	-				-0.2
2,781,697	-				-0.1
2,781,697	-				+0.3
2,781,697	-				-1.1
2,781,702	+				-0.0
2,781,829	+		ABZR87_RS13110	0.47	+0.6
2,781,829	+		ABZR87_RS13110	0.47	+1.8
2,781,830	-		ABZR87_RS13110	0.47	+0.8
2,781,860	+		ABZR87_RS13110	0.58	+0.0
2,781,861	-		ABZR87_RS13110	0.58	+0.1
2,781,861	-		ABZR87_RS13110	0.58	+0.3
2,781,985	+				+0.5
2,781,985	+				-0.2
2,781,985	+				+0.0
2,782,008	+				-0.5
2,782,175	+		ABZR87_RS13115	0.37	-0.1
2,782,175	+		ABZR87_RS13115	0.37	-1.0
2,782,175	+		ABZR87_RS13115	0.37	-0.0
2,782,175	+		ABZR87_RS13115	0.37	-0.0
2,782,175	+		ABZR87_RS13115	0.37	+0.4
2,782,176	-		ABZR87_RS13115	0.37	+0.8
2,782,176	-		ABZR87_RS13115	0.37	-0.1
2,782,176	-		ABZR87_RS13115	0.37	+0.1
2,782,191	+		ABZR87_RS13115	0.41	-0.2
2,782,191	+		ABZR87_RS13115	0.41	-0.2
2,782,191	+		ABZR87_RS13115	0.41	-0.0
2,782,247	+		ABZR87_RS13115	0.53	+0.9
2,782,248	-		ABZR87_RS13115	0.53	+0.2
2,782,248	-		ABZR87_RS13115	0.53	+0.7
2,782,277	-		ABZR87_RS13115	0.60	+0.2
2,782,277	-		ABZR87_RS13115	0.60	-0.8
2,782,380	+		ABZR87_RS13115	0.82	+0.4
2,782,381	-		ABZR87_RS13115	0.83	+0.1
2,782,416	+				-0.2
2,782,417	-				-0.0
2,782,417	-				+0.1
2,782,417	-				+0.3
2,782,417	-				+0.7
2,782,438	+				-0.6
2,782,438	+				-0.3
2,782,438	+				-2.0
2,782,546	+				-0.4
2,782,547	-				+0.1
2,782,547	-				-0.7
2,782,553	+				+1.8
2,782,553	+				+1.8
2,782,553	+				-2.2
2,782,553	+				+0.6
2,782,553	+				+0.4
2,782,553	+				-0.4
2,782,554	-				-1.2
2,782,554	-				-0.2
2,782,554	-				-0.9
2,782,554	-				-0.4
2,782,796	+		ABZR87_RS13120	0.57	-0.6
2,782,796	+		ABZR87_RS13120	0.57	-0.1
2,782,796	+		ABZR87_RS13120	0.57	-0.1
2,782,796	+		ABZR87_RS13120	0.57	-0.1
2,782,796	+		ABZR87_RS13120	0.57	+0.2
2,782,796	+		ABZR87_RS13120	0.57	+0.9
2,782,796	+		ABZR87_RS13120	0.57	-0.1
2,782,797	-		ABZR87_RS13120	0.57	+0.8
2,782,817	-		ABZR87_RS13120	0.62	+0.9
2,782,835	+		ABZR87_RS13120	0.66	-0.2
2,782,836	-		ABZR87_RS13120	0.66	+0.1
2,782,836	-		ABZR87_RS13120	0.66	+0.8
2,782,836	-		ABZR87_RS13120	0.66	+0.8
2,782,923	+		ABZR87_RS13120	0.86	+0.3
2,782,923	+		ABZR87_RS13120	0.86	-0.1
2,782,923	+		ABZR87_RS13120	0.86	-0.0
2,782,963	+				+0.0