Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11960

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
2,538,056	-		ABZR87_RS11950	0.49	+0.2
2,538,241	+				+0.4
2,538,242	-				-0.2
2,538,242	-				-0.1
2,538,242	-				-0.0
2,538,248	+				-0.2
2,538,249	-				-0.2
2,538,254	+				-0.5
2,538,321	+		ABZR87_RS11955	0.13	+0.7
2,538,321	+		ABZR87_RS11955	0.13	+0.8
2,538,322	-		ABZR87_RS11955	0.13	+0.4
2,538,322	-		ABZR87_RS11955	0.13	+0.5
2,538,322	-		ABZR87_RS11955	0.13	-0.4
2,538,322	-		ABZR87_RS11955	0.13	-0.8
2,538,323	+		ABZR87_RS11955	0.13	+0.3
2,538,323	+		ABZR87_RS11955	0.13	+0.5
2,538,323	+		ABZR87_RS11955	0.13	+0.1
2,538,323	+		ABZR87_RS11955	0.13	-0.1
2,538,324	-		ABZR87_RS11955	0.13	-0.1
2,538,324	-		ABZR87_RS11955	0.13	+0.1
2,538,356	+		ABZR87_RS11955	0.19	+1.4
2,538,356	+		ABZR87_RS11955	0.19	+1.0
2,538,357	-		ABZR87_RS11955	0.19	+0.1
2,538,377	+		ABZR87_RS11955	0.23	+0.4
2,538,378	-		ABZR87_RS11955	0.23	+0.3
2,538,378	-		ABZR87_RS11955	0.23	+0.3
2,538,487	+		ABZR87_RS11955	0.43	+0.8
2,538,487	+		ABZR87_RS11955	0.43	+0.0
2,538,488	-		ABZR87_RS11955	0.44	-0.1
2,538,488	-		ABZR87_RS11955	0.44	+0.3
2,538,599	+		ABZR87_RS11955	0.64	-0.7
2,538,599	+		ABZR87_RS11955	0.64	+0.1
2,538,599	+		ABZR87_RS11955	0.64	+0.3
2,538,600	-		ABZR87_RS11955	0.64	-1.0
2,538,677	+		ABZR87_RS11955	0.79	-0.2
2,538,678	-		ABZR87_RS11955	0.79	+0.2
2,538,678	-		ABZR87_RS11955	0.79	-0.7
2,538,678	-		ABZR87_RS11955	0.79	+0.3
2,538,678	-		ABZR87_RS11955	0.79	+0.5
2,538,894	-				-2.2
2,538,948	+				+0.6
2,538,948	+				+0.5
2,539,050	+		ABZR87_RS11960	0.11	+0.8
2,539,051	-		ABZR87_RS11960	0.11	-0.1
2,539,051	-		ABZR87_RS11960	0.11	+1.4
2,539,062	+		ABZR87_RS11960	0.12	+0.8
2,539,062	+		ABZR87_RS11960	0.12	-0.1
2,539,062	+		ABZR87_RS11960	0.12	+0.5
2,539,062	+		ABZR87_RS11960	0.12	-0.8
2,539,062	+		ABZR87_RS11960	0.12	-0.0
2,539,062	+		ABZR87_RS11960	0.12	-0.1
2,539,062	+		ABZR87_RS11960	0.12	+0.3
2,539,063	-		ABZR87_RS11960	0.12	+0.2
2,539,063	-		ABZR87_RS11960	0.12	-0.3
2,539,300	-		ABZR87_RS11960	0.37	+0.7
2,539,300	-		ABZR87_RS11960	0.37	-0.9
2,539,300	-		ABZR87_RS11960	0.37	-0.3
2,539,300	-		ABZR87_RS11960	0.37	-0.4
2,539,300	-		ABZR87_RS11960	0.37	+0.9
2,539,301	+		ABZR87_RS11960	0.37	+0.3
2,539,301	+		ABZR87_RS11960	0.37	-0.3
2,539,301	+		ABZR87_RS11960	0.37	-0.1
2,539,301	+		ABZR87_RS11960	0.37	-0.2
2,539,301	+		ABZR87_RS11960	0.37	+0.1
2,539,302	-		ABZR87_RS11960	0.38	-0.7
2,539,302	-		ABZR87_RS11960	0.38	-0.5
2,539,302	-		ABZR87_RS11960	0.38	-0.9
2,539,302	-		ABZR87_RS11960	0.38	+1.5
2,539,302	-		ABZR87_RS11960	0.38	+0.2
2,539,302	-		ABZR87_RS11960	0.38	-1.6
2,539,314	+		ABZR87_RS11960	0.39	-0.1
2,539,369	-		ABZR87_RS11960	0.45	-0.2
2,539,369	-		ABZR87_RS11960	0.45	-0.0
2,539,369	-		ABZR87_RS11960	0.45	-0.2
2,539,649	+		ABZR87_RS11960	0.74	-0.1
2,539,649	+		ABZR87_RS11960	0.74	-0.5
2,539,649	+		ABZR87_RS11960	0.74	-0.1
2,539,649	+		ABZR87_RS11960	0.74	-0.3
2,539,653	+		ABZR87_RS11960	0.75	-0.4
2,539,653	+		ABZR87_RS11960	0.75	+2.3
2,539,653	+		ABZR87_RS11960	0.75	+0.6
2,539,653	+		ABZR87_RS11960	0.75	-1.0
2,539,653	+		ABZR87_RS11960	0.75	-1.5
2,539,654	-		ABZR87_RS11960	0.75	+0.8
2,539,654	-		ABZR87_RS11960	0.75	-0.1
2,539,654	-		ABZR87_RS11960	0.75	-0.2
2,539,654	-		ABZR87_RS11960	0.75	+0.0
2,539,654	-		ABZR87_RS11960	0.75	-0.3
2,539,654	-		ABZR87_RS11960	0.75	-0.6
2,539,654	-		ABZR87_RS11960	0.75	-0.1
2,539,654	-		ABZR87_RS11960	0.75	-0.7
2,539,654	-		ABZR87_RS11960	0.75	-0.3
2,539,654	-		ABZR87_RS11960	0.75	-0.7
2,539,656	+		ABZR87_RS11960	0.75	-0.2
2,539,656	+		ABZR87_RS11960	0.75	-0.2
2,539,656	+		ABZR87_RS11960	0.75	+0.7
2,539,657	-		ABZR87_RS11960	0.75	+0.2
2,539,657	-		ABZR87_RS11960	0.75	+0.2
2,539,657	-		ABZR87_RS11960	0.75	+0.5
2,539,657	-		ABZR87_RS11960	0.75	-0.3
2,539,712	+		ABZR87_RS11960	0.81	-1.4
2,539,713	-		ABZR87_RS11960	0.81	-1.1
2,539,713	-		ABZR87_RS11960	0.81	-0.4
2,539,771	-		ABZR87_RS11960	0.87	+1.0
2,539,780	-		ABZR87_RS11960	0.88	-0.8
2,539,877	+				-0.0
2,539,878	-				+0.5
2,539,878	-				-0.1
2,539,878	-				-1.5
2,539,878	-				+1.8
2,539,878	-				-0.0
2,539,878	-				-0.3
2,539,878	-				+0.7
2,539,977	+				+0.1
2,539,978	-				-0.3
2,539,990	+				+1.8