Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08645

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
1,836,668	+		ABZR87_RS08640	0.14	+0.6
1,836,669	-		ABZR87_RS08640	0.14	-0.2
1,836,746	+		ABZR87_RS08640	0.23	-0.8
1,836,747	-		ABZR87_RS08640	0.24	-2.0
1,836,999	+		ABZR87_RS08640	0.53	-0.6
1,836,999	+		ABZR87_RS08640	0.53	+1.3
1,836,999	+		ABZR87_RS08640	0.53	-0.1
1,837,000	-		ABZR87_RS08640	0.53	+0.9
1,837,000	-		ABZR87_RS08640	0.53	-0.1
1,837,000	-		ABZR87_RS08640	0.53	-1.2
1,837,000	-		ABZR87_RS08640	0.53	+0.1
1,837,176	+		ABZR87_RS08640	0.74	+0.5
1,837,248	+		ABZR87_RS08640	0.82	-1.0
1,837,398	+				+0.1
1,837,398	+				-0.3
1,837,398	+				+1.5
1,837,398	+				-0.3
1,837,398	+				+0.4
1,837,399	-				-1.0
1,837,399	-				-0.7
1,837,399	-				-0.1
1,837,399	-				-1.6
1,837,400	+				-0.4
1,837,400	+				+0.8
1,837,400	+				-1.1
1,837,400	+				+1.4
1,837,400	+				-0.3
1,837,400	+				+0.2
1,837,401	-				-0.1
1,837,401	-				+0.6
1,837,401	-				-1.0
1,837,401	-				-0.5
1,837,401	-				-0.8
1,837,401	-				-0.1
1,837,438	+				-0.3
1,837,438	+				+1.1
1,837,438	+				+0.8
1,837,438	+				+0.0
1,837,439	-				+1.6
1,837,439	-				-0.2
1,837,439	-				+0.6
1,837,439	-				-1.6
1,837,492	+				+0.9
1,837,492	+				+0.5
1,837,492	+				+0.9
1,837,492	+				+0.6
1,837,492	+				-0.8
1,837,492	+				+0.9
1,837,492	+				-0.7
1,837,493	-				-0.0
1,837,493	-				-0.2
1,837,493	-				-0.4
1,837,493	-				+1.6
1,837,507	+				+1.0
1,837,507	+				+0.6
1,837,508	-				-0.6
1,837,508	-				-0.7
1,837,508	-				-0.6
1,837,512	+				-0.5
1,837,512	+				-0.1
1,837,512	+				-0.4
1,837,512	+				-1.2
1,837,512	+				-0.0
1,837,512	+				+0.3
1,837,512	+				+0.5
1,837,512	+				-0.0
1,837,513	-				+1.1
1,837,513	-				-1.1
1,837,513	-				-1.3
1,837,513	-				-0.4
1,837,513	-				-0.5
1,837,513	-				-0.4
1,837,523	+				-0.2
1,837,533	+				+0.0
1,837,533	+				-1.8
1,837,533	+				+1.4
1,837,534	-				-1.8
1,837,537	-				-0.1
1,837,537	-				+0.7
1,837,607	+				+0.5
1,837,607	+				+0.4
1,837,607	+				-0.8
1,838,143	+		ABZR87_RS08645	0.50	-0.7
1,838,666	+				+0.9
1,838,666	+				+0.3
1,838,666	+				-0.9
1,838,666	+				+0.0
1,838,666	+				-1.4
1,838,666	+				-0.5
1,838,666	+				-0.9
1,838,666	+				+0.4
1,838,667	-				+0.6
1,838,667	-				-1.5
1,838,667	-				+0.7
1,838,667	-				-0.6
1,838,673	+				-1.0
1,838,673	+				+0.6
1,838,673	+				-0.3
1,838,673	+				+1.0
1,838,673	+				+0.9
1,838,674	-				+0.0
1,838,674	-				+0.0
1,838,675	+				+0.1
1,838,675	+				+1.8
1,838,675	+				+0.0
1,838,675	+				-0.7
1,838,783	+		ABZR87_RS08650	0.13	+0.4
1,838,783	+		ABZR87_RS08650	0.13	+0.1
1,838,783	+		ABZR87_RS08650	0.13	-1.0
1,838,868	+		ABZR87_RS08650	0.22	-1.7
1,838,868	+		ABZR87_RS08650	0.22	-0.4
1,838,869	-		ABZR87_RS08650	0.22	+2.2
1,838,869	-		ABZR87_RS08650	0.22	+0.0
1,838,982	+		ABZR87_RS08650	0.34	+0.4
1,838,982	+		ABZR87_RS08650	0.34	-0.4
1,838,994	+		ABZR87_RS08650	0.36	-0.9
1,838,994	+		ABZR87_RS08650	0.36	-0.3
1,838,994	+		ABZR87_RS08650	0.36	-0.8
1,838,994	+		ABZR87_RS08650	0.36	-0.3
1,838,994	+		ABZR87_RS08650	0.36	-1.5
1,838,994	+		ABZR87_RS08650	0.36	+1.6
1,838,994	+		ABZR87_RS08650	0.36	+0.9
1,838,994	+		ABZR87_RS08650	0.36	+0.2
1,838,995	-		ABZR87_RS08650	0.36	+0.0
1,838,995	-		ABZR87_RS08650	0.36	+0.6
1,839,011	+		ABZR87_RS08650	0.37	-0.2
1,839,025	-		ABZR87_RS08650	0.39	-2.5
1,839,025	-		ABZR87_RS08650	0.39	-0.4
1,839,060	+		ABZR87_RS08650	0.43	-0.4
1,839,060	+		ABZR87_RS08650	0.43	-0.2
1,839,060	+		ABZR87_RS08650	0.43	-0.9
1,839,061	-		ABZR87_RS08650	0.43	+2.6
1,839,068	+		ABZR87_RS08650	0.44	-1.0
1,839,068	+		ABZR87_RS08650	0.44	+2.3
1,839,069	-		ABZR87_RS08650	0.44	+1.6
1,839,092	+		ABZR87_RS08650	0.46	+1.2
1,839,092	+		ABZR87_RS08650	0.46	-0.6
1,839,092	+		ABZR87_RS08650	0.46	-1.2
1,839,121	+		ABZR87_RS08650	0.49	+0.3
1,839,121	+		ABZR87_RS08650	0.49	-1.2
1,839,122	-		ABZR87_RS08650	0.50	-0.4
1,839,128	+		ABZR87_RS08650	0.50	-0.5
1,839,225	+		ABZR87_RS08650	0.61	-0.8
1,839,225	+		ABZR87_RS08650	0.61	-1.4
1,839,225	+		ABZR87_RS08650	0.61	-0.4
1,839,225	+		ABZR87_RS08650	0.61	-1.0
1,839,327	+		ABZR87_RS08650	0.72	-0.3
1,839,327	+		ABZR87_RS08650	0.72	-1.2
1,839,327	+		ABZR87_RS08650	0.72	-0.7
1,839,327	+		ABZR87_RS08650	0.72	-0.1
1,839,366	+		ABZR87_RS08650	0.76	-1.0
1,839,366	+		ABZR87_RS08650	0.76	-1.4
1,839,366	+		ABZR87_RS08650	0.76	-0.6
1,839,366	+		ABZR87_RS08650	0.76	-1.1
1,839,366	+		ABZR87_RS08650	0.76	-0.6
1,839,367	-		ABZR87_RS08650	0.76	-2.5
1,839,367	-		ABZR87_RS08650	0.76	+2.6
1,839,367	-		ABZR87_RS08650	0.76	+0.3
1,839,367	-		ABZR87_RS08650	0.76	-2.1
1,839,367	-		ABZR87_RS08650	0.76	+2.6
1,839,367	-		ABZR87_RS08650	0.76	+1.6
1,839,367	-		ABZR87_RS08650	0.76	-1.5
1,839,367	-		ABZR87_RS08650	0.76	-1.2
1,839,367	-		ABZR87_RS08650	0.76	+0.8
1,839,425	+		ABZR87_RS08650	0.83	+0.8
1,839,430	-		ABZR87_RS08650	0.83	-0.2
1,839,524	+				-0.0
1,839,524	+				-0.8
1,839,532	+				-0.1
1,839,532	+				-0.6
1,839,533	-				+0.6
1,839,596	+				-1.8
1,839,596	+				-0.7
1,839,597	-				+0.6
1,839,597	-				+0.0
1,839,597	-				+3.2
1,839,612	-				+0.0
1,839,651	-				+1.0