Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06175

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
1,315,436	+		ABZR87_RS06170	0.19	-0.6
1,315,437	-		ABZR87_RS06170	0.19	+0.0
1,315,437	-		ABZR87_RS06170	0.19	-2.3
1,315,464	+		ABZR87_RS06170	0.22	+0.0
1,315,465	-		ABZR87_RS06170	0.22	+0.3
1,315,494	+		ABZR87_RS06170	0.25	-0.0
1,315,539	+		ABZR87_RS06170	0.30	-0.5
1,315,539	+		ABZR87_RS06170	0.30	-0.3
1,315,539	+		ABZR87_RS06170	0.30	-2.7
1,315,540	-		ABZR87_RS06170	0.30	+0.3
1,315,540	-		ABZR87_RS06170	0.30	-0.9
1,315,716	+		ABZR87_RS06170	0.49	-0.2
1,315,717	-		ABZR87_RS06170	0.49	+0.1
1,315,717	-		ABZR87_RS06170	0.49	-0.3
1,315,750	-		ABZR87_RS06170	0.53	+0.8
1,315,821	+		ABZR87_RS06170	0.61	-0.2
1,315,890	+		ABZR87_RS06170	0.68	-0.4
1,315,891	-		ABZR87_RS06170	0.68	+1.0
1,315,941	+		ABZR87_RS06170	0.73	-0.8
1,315,941	+		ABZR87_RS06170	0.73	-0.4
1,315,941	+		ABZR87_RS06170	0.73	+1.0
1,316,127	+				-0.3
1,316,127	+				-0.2
1,316,127	+				+0.1
1,316,128	-				-0.1
1,316,128	-				+1.8
1,316,128	-				+0.7
1,316,128	-				-0.0
1,316,128	-				-0.2
1,316,128	-				+1.7
1,316,175	+				+0.5
1,316,176	-				-0.4
1,316,207	+				-1.1
1,316,207	+				+0.6
1,316,240	+				-0.2
1,316,240	+				-0.3
1,316,240	+				+0.3
1,316,240	+				+0.4
1,316,240	+				+0.2
1,316,240	+				-1.7
1,316,241	-				+1.2
1,316,432	+		ABZR87_RS06175	0.33	-0.6
1,316,510	+		ABZR87_RS06175	0.44	-0.2
1,316,511	-		ABZR87_RS06175	0.45	-1.7
1,316,511	-		ABZR87_RS06175	0.45	+0.3
1,316,631	-		ABZR87_RS06175	0.62	-0.4
1,316,631	-		ABZR87_RS06175	0.62	-0.2
1,316,688	+		ABZR87_RS06175	0.70	-0.7
1,316,688	+		ABZR87_RS06175	0.70	+0.2
1,316,688	+		ABZR87_RS06175	0.70	+0.7
1,316,688	+		ABZR87_RS06175	0.70	-1.1
1,316,689	-		ABZR87_RS06175	0.71	-0.3
1,316,689	-		ABZR87_RS06175	0.71	-0.6
1,317,103	+		ABZR87_RS06180	0.29	-1.0
1,317,103	+		ABZR87_RS06180	0.29	-0.3
1,317,103	+		ABZR87_RS06180	0.29	-0.3
1,317,103	+		ABZR87_RS06180	0.29	+0.3
1,317,104	-		ABZR87_RS06180	0.29	-0.7
1,317,104	-		ABZR87_RS06180	0.29	+1.1
1,317,104	-		ABZR87_RS06180	0.29	+0.3
1,317,104	-		ABZR87_RS06180	0.29	-0.1
1,317,104	-		ABZR87_RS06180	0.29	-0.2
1,317,154	+		ABZR87_RS06180	0.36	-0.8
1,317,155	-		ABZR87_RS06180	0.36	-0.4
1,317,274	+		ABZR87_RS06180	0.51	-0.1
1,317,275	-		ABZR87_RS06180	0.51	-0.1
1,317,275	-		ABZR87_RS06180	0.51	+0.7
1,317,275	-		ABZR87_RS06180	0.51	-0.4
1,317,275	-		ABZR87_RS06180	0.51	+0.4
1,317,275	-		ABZR87_RS06180	0.51	+0.2
1,317,275	-		ABZR87_RS06180	0.51	-2.0
1,317,280	+		ABZR87_RS06180	0.52	-0.7
1,317,280	+		ABZR87_RS06180	0.52	+0.5
1,317,280	+		ABZR87_RS06180	0.52	+0.2
1,317,281	-		ABZR87_RS06180	0.52	-0.6
1,317,281	-		ABZR87_RS06180	0.52	-2.7
1,317,281	-		ABZR87_RS06180	0.52	+0.5
1,317,281	-		ABZR87_RS06180	0.52	+0.6
1,317,281	-		ABZR87_RS06180	0.52	+0.2
1,317,319	+		ABZR87_RS06180	0.57	-1.4
1,317,320	-		ABZR87_RS06180	0.57	+0.3
1,317,370	+		ABZR87_RS06180	0.64	+0.4
1,317,371	-		ABZR87_RS06180	0.64	-0.5
1,317,371	-		ABZR87_RS06180	0.64	+0.5
1,317,371	-		ABZR87_RS06180	0.64	+0.6
1,317,371	-		ABZR87_RS06180	0.64	+0.3
1,317,655	-				+0.1
1,317,705	+				+0.2
1,317,705	+				+0.3
1,317,705	+				-0.2
1,317,706	-				+0.8
1,317,706	-				+0.1
1,317,717	+				-0.2
1,317,717	+				-0.3
1,317,717	+				-0.7
1,317,717	+				+1.1
1,317,717	+				-0.4
1,317,717	+				-0.5
1,317,717	+				+0.8
1,317,718	-				+0.2
1,317,718	-				+1.2
1,317,732	+				+0.1
1,317,732	+				-1.0
1,317,732	+				+0.5
1,317,732	+				-0.0
1,317,733	-				-0.1
1,317,733	-				-0.2
1,317,733	-				-0.1
1,317,733	-				+0.8
1,317,819	+				-0.3
1,317,876	+				-0.5
1,317,876	+				+1.7
1,317,876	+				+0.4
1,317,876	+				-0.3
1,317,876	+				-0.7
1,317,877	-				+0.4
1,317,877	-				+1.4
1,317,877	-				+0.0
1,317,877	-				+0.3
1,317,877	-				+0.7
1,317,879	+		ABZR87_RS06185	0.10	+0.5
1,317,880	-		ABZR87_RS06185	0.10	-0.6