Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05970

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
1,275,492	+		ABZR87_RS05960	0.86	+1.1
1,275,492	+		ABZR87_RS05960	0.86	-0.7
1,275,549	-		ABZR87_RS05960	0.89	+0.5
1,275,549	-		ABZR87_RS05960	0.89	-0.1
1,275,711	+				-0.3
1,275,711	+				-0.8
1,275,711	+				+0.1
1,275,712	-				-0.1
1,275,915	+		ABZR87_RS05965	0.28	+1.7
1,276,096	+		ABZR87_RS05965	0.66	+0.0
1,276,097	-		ABZR87_RS05965	0.66	+1.1
1,276,097	-		ABZR87_RS05965	0.66	-0.3
1,276,378	+				-1.4
1,276,378	+				+0.7
1,276,378	+				-1.3
1,276,379	-				-0.0
1,276,379	-				+0.4
1,276,379	-				-0.9
1,276,379	-				-0.8
1,276,450	+				+0.3
1,276,450	+				-1.3
1,276,450	+				+0.7
1,276,450	+				+0.1
1,276,451	-				-0.3
1,276,457	+				-0.1
1,276,457	+				+0.1
1,276,457	+				-0.3
1,276,458	-				+0.3
1,276,458	-				-0.1
1,276,528	+		ABZR87_RS05970	0.15	-0.2
1,276,529	-		ABZR87_RS05970	0.15	-0.1
1,276,598	+		ABZR87_RS05970	0.30	-0.1
1,276,598	+		ABZR87_RS05970	0.30	+0.4
1,276,598	+		ABZR87_RS05970	0.30	+0.4
1,276,599	-		ABZR87_RS05970	0.30	-1.1
1,276,692	+		ABZR87_RS05970	0.50	+1.7
1,276,693	-		ABZR87_RS05970	0.50	-0.8
1,276,893	+				+0.2
1,276,894	-				-0.1
1,276,894	-				+0.3
1,276,896	+				-0.0
1,276,896	+				+0.2
1,276,912	-				-0.4
1,276,923	+				-0.2
1,276,923	+				+0.3
1,276,924	-				-0.2
1,276,924	-				-0.8
1,276,924	-				+0.3
1,276,924	-				-0.3
1,276,924	-				+1.0
1,276,924	-				+0.3
1,277,001	+				-0.1
1,277,001	+				-1.1
1,277,001	+				+1.7
1,277,001	+				-0.9
1,277,002	-				-0.1
1,277,002	-				-0.9
1,277,176	+				+0.4
1,277,176	+				+0.4
1,277,177	-				+0.7
1,277,177	-				+0.3
1,277,293	+		ABZR87_RS05980	0.14	-0.1
1,277,294	-		ABZR87_RS05980	0.14	-0.2
1,277,417	+		ABZR87_RS05980	0.49	-0.5
1,277,523	+		ABZR87_RS05980	0.79	-0.7
1,277,524	-		ABZR87_RS05980	0.79	+0.3
1,277,524	-		ABZR87_RS05980	0.79	+0.3
1,277,524	-		ABZR87_RS05980	0.79	+0.1
1,277,533	+		ABZR87_RS05980	0.82	+0.8
1,277,533	+		ABZR87_RS05980	0.82	+0.9
1,277,533	+		ABZR87_RS05980	0.82	+0.1
1,277,533	+		ABZR87_RS05980	0.82	+0.2
1,277,617	-				-0.7
1,277,634	+				-0.1
1,277,634	+				-0.2
1,277,684	+				-0.8
1,277,685	-				+0.4
1,277,706	-				+0.8
1,277,706	-				-0.3
1,277,706	-				+0.1
1,277,706	-				-0.0
1,277,925	-		ABZR87_RS05985	0.17	+0.3