Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05495

Experiment: Ra3_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.01
1,166,700	+				+1.0
1,166,700	+				+0.2
1,166,700	+				+0.1
1,166,700	+				+0.3
1,166,701	-				+0.1
1,166,701	-				+0.1
1,166,701	-				+0.3
1,166,806	+				-0.2
1,166,806	+				-0.1
1,166,806	+				+0.2
1,166,806	+				+0.4
1,166,806	+				-0.4
1,166,806	+				+0.3
1,166,806	+				-0.7
1,166,806	+				-0.1
1,166,806	+				-0.7
1,166,807	-				+0.1
1,166,807	-				+0.5
1,166,807	-				+0.2
1,166,807	-				+0.3
1,166,807	-				+0.4
1,166,807	-				-1.0
1,166,810	+				+1.0
1,166,810	+				-0.7
1,166,811	-				-0.3
1,166,811	-				+1.5
1,166,811	-				-0.3
1,166,811	-				-0.8
1,166,831	-				-0.2
1,166,831	-				-0.5
1,166,831	-				-0.8
1,166,831	-				-0.3
1,166,881	+				-0.0
1,166,882	-				+0.2
1,166,888	-				+0.1
1,166,888	-				+0.7
1,166,888	-				+0.4
1,166,888	-				+0.5
1,166,888	-				+0.2
1,166,888	-				+0.5
1,166,909	-				-1.5
1,166,936	+				-1.7
1,166,937	-				-0.5
1,166,937	-				+0.5
1,167,038	+		ABZR87_RS05490	0.14	+0.6
1,167,039	-		ABZR87_RS05490	0.15	+0.1
1,167,095	+		ABZR87_RS05490	0.25	+1.9
1,167,095	+		ABZR87_RS05490	0.25	+1.1
1,167,095	+		ABZR87_RS05490	0.25	+0.3
1,167,095	+		ABZR87_RS05490	0.25	+0.8
1,167,095	+		ABZR87_RS05490	0.25	-0.5
1,167,096	-		ABZR87_RS05490	0.25	+0.5
1,167,096	-		ABZR87_RS05490	0.25	-1.3
1,167,096	-		ABZR87_RS05490	0.25	-0.1
1,167,096	-		ABZR87_RS05490	0.25	-1.3
1,167,167	+		ABZR87_RS05490	0.38	-0.6
1,167,168	-		ABZR87_RS05490	0.38	+0.1
1,167,244	+		ABZR87_RS05490	0.52	-0.3
1,167,245	-		ABZR87_RS05490	0.52	-0.5
1,167,266	+		ABZR87_RS05490	0.56	-0.3
1,167,266	+		ABZR87_RS05490	0.56	-1.0
1,167,267	-		ABZR87_RS05490	0.57	-0.5
1,167,267	-		ABZR87_RS05490	0.57	+0.7
1,167,267	-		ABZR87_RS05490	0.57	+0.3
1,167,267	-		ABZR87_RS05490	0.57	+0.3
1,167,398	+		ABZR87_RS05490	0.81	+0.6
1,167,398	+		ABZR87_RS05490	0.81	+0.8
1,167,399	-		ABZR87_RS05490	0.81	-0.8
1,167,422	+		ABZR87_RS05490	0.85	-0.3
1,167,422	+		ABZR87_RS05490	0.85	+0.7
1,167,423	-		ABZR87_RS05490	0.85	+2.7
1,167,423	-		ABZR87_RS05490	0.85	-0.1
1,167,500	+				-0.1
1,167,500	+				-0.2
1,167,508	+				-0.2
1,167,509	-				-0.6
1,167,509	-				-0.1
1,167,522	-				+0.3
1,167,545	+				-0.2
1,167,546	-				+0.2
1,167,546	-				+0.8
1,167,559	+				-0.3
1,167,560	-				+0.7
1,167,578	-				-0.3
1,167,593	-				+0.4
1,167,593	-				-0.3
1,167,797	+		ABZR87_RS05495	0.47	+0.5
1,168,057	+				+0.0
1,168,057	+				-0.4
1,168,069	+				+0.6
1,168,070	-				-0.2
1,168,120	+				-0.4
1,168,120	+				+1.3
1,168,121	-				-1.2
1,168,121	-				-0.0
1,168,126	+				-0.3
1,168,186	-				+0.9
1,168,233	+				-0.6
1,168,233	+				-0.5
1,168,233	+				-0.4
1,168,233	+				-0.0
1,168,233	+				-0.5
1,168,234	-				-0.4
1,168,234	-				-1.8
1,168,234	-				-0.1
1,168,234	-				+2.1
1,168,299	+		ABZR87_RS05500	0.13	-1.3
1,168,300	-		ABZR87_RS05500	0.13	-0.1
1,168,337	+		ABZR87_RS05500	0.17	+0.1
1,168,337	+		ABZR87_RS05500	0.17	-0.4
1,168,338	-		ABZR87_RS05500	0.17	+0.9
1,168,338	-		ABZR87_RS05500	0.17	+0.2
1,168,338	-		ABZR87_RS05500	0.17	+0.1
1,168,341	+		ABZR87_RS05500	0.17	-0.1
1,168,342	-		ABZR87_RS05500	0.17	+0.9
1,168,342	-		ABZR87_RS05500	0.17	-1.3
1,168,342	-		ABZR87_RS05500	0.17	+1.5
1,168,377	+		ABZR87_RS05500	0.21	-1.8
1,168,377	+		ABZR87_RS05500	0.21	-0.8
1,168,378	-		ABZR87_RS05500	0.21	-1.0
1,168,427	+		ABZR87_RS05500	0.27	-1.0
1,168,427	+		ABZR87_RS05500	0.27	-0.1
1,168,656	+		ABZR87_RS05500	0.52	-0.2
1,168,656	+		ABZR87_RS05500	0.52	+0.3
1,168,656	+		ABZR87_RS05500	0.52	+0.1
1,168,830	+		ABZR87_RS05500	0.71	+1.5
1,168,830	+		ABZR87_RS05500	0.71	-1.0
1,168,830	+		ABZR87_RS05500	0.71	+0.3
1,168,830	+		ABZR87_RS05500	0.71	+0.0
1,168,831	-		ABZR87_RS05500	0.71	+0.7