Experiment: MoYLS4 with Ammonium Persulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1703 and DVU1704 are separated by 178 nucleotides DVU1704 and DVU1705 are separated by 26 nucleotides
DVU1703: DVU1703 - type I restriction-modification enzyme, R subunit (TIGR), at 1,777,728 to 1,781,027
DVU1703
DVU1704: DVU1704 - conserved hypothetical protein (TIGR), at 1,781,206 to 1,781,433
DVU1704
DVU1705: DVU1705 - type I restriction-modification enzyme, S subunit (TIGR), at 1,781,460 to 1,782,710
DVU1705
Position (kb)
1781
1782 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1780.251 kb on - strand, within DVU1703 at 1780.251 kb on - strand, within DVU1703 at 1780.251 kb on - strand, within DVU1703 at 1780.251 kb on - strand, within DVU1703 at 1780.251 kb on - strand, within DVU1703 at 1780.251 kb on - strand, within DVU1703 at 1780.306 kb on + strand, within DVU1703 at 1780.348 kb on + strand, within DVU1703 at 1780.348 kb on + strand, within DVU1703 at 1780.356 kb on - strand, within DVU1703 at 1780.358 kb on + strand, within DVU1703 at 1780.405 kb on + strand, within DVU1703 at 1780.405 kb on + strand, within DVU1703 at 1780.528 kb on + strand, within DVU1703 at 1780.660 kb on - strand, within DVU1703 at 1780.758 kb on + strand at 1780.758 kb on + strand at 1780.766 kb on - strand at 1780.766 kb on - strand at 1780.770 kb on + strand at 1780.842 kb on - strand at 1780.868 kb on - strand at 1780.887 kb on - strand at 1780.915 kb on + strand at 1780.962 kb on + strand at 1781.003 kb on - strand at 1781.058 kb on - strand at 1781.139 kb on - strand at 1781.166 kb on - strand at 1781.168 kb on + strand at 1781.298 kb on - strand, within DVU1704 at 1781.428 kb on + strand at 1781.443 kb on - strand at 1781.461 kb on + strand at 1781.496 kb on - strand at 1781.528 kb on - strand at 1781.528 kb on - strand at 1781.607 kb on - strand, within DVU1705 at 1782.188 kb on - strand, within DVU1705
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ammonium Persulfate 1mM remove 1,780,251 - DVU1703 0.76 -0.6 1,780,251 - DVU1703 0.76 -1.0 1,780,251 - DVU1703 0.76 -0.3 1,780,251 - DVU1703 0.76 -1.3 1,780,251 - DVU1703 0.76 -0.3 1,780,251 - DVU1703 0.76 -0.3 1,780,306 + DVU1703 0.78 +0.1 1,780,348 + DVU1703 0.79 +0.3 1,780,348 + DVU1703 0.79 +2.7 1,780,356 - DVU1703 0.80 -0.4 1,780,358 + DVU1703 0.80 -0.5 1,780,405 + DVU1703 0.81 +0.1 1,780,405 + DVU1703 0.81 -0.6 1,780,528 + DVU1703 0.85 -2.4 1,780,660 - DVU1703 0.89 -1.0 1,780,758 + -2.0 1,780,758 + -0.0 1,780,766 - -0.3 1,780,766 - +0.2 1,780,770 + -0.0 1,780,842 - -0.4 1,780,868 - -0.2 1,780,887 - -0.7 1,780,915 + -0.0 1,780,962 + -0.6 1,781,003 - -0.7 1,781,058 - -0.0 1,781,139 - -0.0 1,781,166 - -0.3 1,781,168 + -0.9 1,781,298 - DVU1704 0.40 -1.3 1,781,428 + +0.4 1,781,443 - +0.3 1,781,461 + -0.7 1,781,496 - -0.1 1,781,528 - -0.6 1,781,528 - -1.5 1,781,607 - DVU1705 0.12 -0.4 1,782,188 - DVU1705 0.58 +0.3
Or see this region's nucleotide sequence