Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_65p00440
Experiment: Carbon source L-Ornithine 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source L-Ornithine 5 mM |
---|---|---|---|---|---|
remove | |||||
58,550 | + | PGA1_65p00430 | 0.24 | -0.5 | |
58,565 | - | PGA1_65p00430 | 0.26 | +1.1 | |
58,633 | + | -2.1 | |||
58,633 | + | PGA1_65p00430 | 0.32 | -1.1 | |
58,633 | + | PGA1_65p00430 | 0.32 | -0.8 | |
58,641 | - | PGA1_65p00430 | 0.33 | +0.1 | |
58,646 | - | PGA1_65p00430 | 0.33 | +0.9 | |
58,648 | - | PGA1_65p00430 | 0.34 | +0.1 | |
58,651 | + | PGA1_65p00430 | 0.34 | +0.7 | |
58,736 | + | PGA1_65p00430 | 0.42 | +0.1 | |
58,820 | - | PGA1_65p00430 | 0.50 | -0.7 | |
58,931 | + | PGA1_65p00430 | 0.61 | -2.2 | |
58,939 | - | PGA1_65p00430 | 0.61 | -1.0 | |
59,115 | + | PGA1_65p00430 | 0.78 | -0.0 | |
59,316 | + | -0.2 | |||
59,393 | - | -0.0 | |||
59,459 | + | -1.0 | |||
60,201 | + | PGA1_65p00440 | 0.70 | +1.2 | |
60,503 | - | -1.9 | |||
60,524 | - | +0.3 | |||
60,524 | - | -0.4 | |||
60,529 | - | +0.4 | |||
60,531 | + | +0.2 | |||
60,764 | - | +0.8 | |||
60,798 | + | +0.9 | |||
60,828 | + | -1.2 | |||
60,886 | + | -0.3 | |||
60,894 | - | -0.2 | |||
61,149 | + | PGA1_65p00450 | 0.26 | -2.0 | |
61,149 | + | PGA1_65p00450 | 0.26 | -0.5 | |
61,207 | + | PGA1_65p00450 | 0.30 | +0.1 |
Or see this region's nucleotide sequence