Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33230

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,481,249	-		PGA1_c33210	0.79	+0.0
3,481,270	+		PGA1_c33210	0.80	-0.1
3,481,305	+		PGA1_c33210	0.82	+0.7
3,481,386	-		PGA1_c33210	0.88	-1.1
3,481,393	-		PGA1_c33210	0.88	+0.2
3,481,404	+		PGA1_c33210	0.89	+0.4
3,481,404	+		PGA1_c33210	0.89	-2.5
3,481,412	-		PGA1_c33210	0.89	+1.1
3,481,412	-		PGA1_c33210	0.89	-1.2
3,481,420	+		PGA1_c33210	0.90	+0.5
3,481,421	+		PGA1_c33210	0.90	+0.6
3,481,428	-				+0.2
3,481,439	+				+1.7
3,481,507	+				+0.7
3,481,507	+				-1.9
3,481,575	+				+0.2
3,481,575	+				-1.2
3,481,583	-				-1.3
3,481,593	-				-1.9
3,481,631	+				-0.4
3,481,665	+				+0.7
3,481,672	+				-1.5
3,481,677	+				+0.3
3,481,689	+				+0.7
3,481,702	-				+0.8
3,481,744	-		PGA1_c33220	0.21	+1.3
3,481,749	-		PGA1_c33220	0.23	+0.1
3,481,792	-		PGA1_c33220	0.36	+0.5
3,481,799	-		PGA1_c33220	0.38	+0.7
3,481,804	+		PGA1_c33220	0.40	+1.2
3,481,888	-		PGA1_c33220	0.65	-0.4
3,481,888	-		PGA1_c33220	0.65	-0.0
3,481,897	+		PGA1_c33220	0.68	-1.7
3,481,905	-		PGA1_c33220	0.71	-0.4
3,481,965	-		PGA1_c33220	0.89	+0.1
3,482,039	+				-2.7
3,482,071	-				-0.7
3,482,083	+				+0.4
3,482,094	-				-0.3
3,482,123	+				-0.0
3,482,133	+				-0.5
3,482,133	+				-0.1
3,482,168	+				+0.3
3,482,168	+				+0.8
3,482,168	+				-0.0
3,482,168	+				-0.9
3,482,168	+				+0.1
3,482,176	-				-0.0
3,482,176	-				+0.3
3,482,176	-				-0.4
3,482,176	-				-0.2
3,482,176	-				+0.4
3,482,178	+				-0.1
3,482,186	+				+0.1
3,482,381	+		PGA1_c33230	0.14	+0.6
3,482,385	+		PGA1_c33230	0.15	+1.6
3,482,385	+		PGA1_c33230	0.15	-0.7
3,482,385	+		PGA1_c33230	0.15	-1.6
3,482,393	-		PGA1_c33230	0.16	-1.0
3,482,402	+		PGA1_c33230	0.17	-1.4
3,482,408	-		PGA1_c33230	0.17	-0.0
3,482,415	+		PGA1_c33230	0.18	+1.6
3,482,431	+		PGA1_c33230	0.20	-0.6
3,482,437	+		PGA1_c33230	0.20	-2.1
3,482,491	+		PGA1_c33230	0.26	-2.1
3,482,513	+		PGA1_c33230	0.29	+0.6
3,482,522	+		PGA1_c33230	0.29	-0.7
3,482,547	+		PGA1_c33230	0.32	-0.4
3,482,560	-		PGA1_c33230	0.34	-1.4
3,482,594	-		PGA1_c33230	0.37	-1.0
3,482,594	-		PGA1_c33230	0.37	-1.0
3,482,594	-		PGA1_c33230	0.37	-0.7
3,482,636	+		PGA1_c33230	0.42	-0.4
3,482,692	-		PGA1_c33230	0.48	-0.7
3,482,725	+		PGA1_c33230	0.51	+2.6
3,482,768	+		PGA1_c33230	0.56	-0.0
3,482,826	-		PGA1_c33230	0.62	+1.6
3,482,830	+		PGA1_c33230	0.62	+1.9
3,482,869	+		PGA1_c33230	0.67	-0.4
3,482,995	+		PGA1_c33230	0.80	-0.0
3,483,200	+				-1.3
3,483,200	-				-2.2
3,483,200	-				+1.0
3,483,203	-				+0.1
3,483,203	-				+0.3
3,483,215	-				+1.1
3,483,219	+				-0.0
3,483,227	-				-1.6
3,483,227	-				+2.6
3,483,227	-				-1.1
3,483,227	-				-1.1
3,483,247	+				+0.6
3,483,298	-		PGA1_c33240	0.14	+0.9
3,483,439	+		PGA1_c33240	0.36	-0.5
3,483,493	-		PGA1_c33240	0.44	+0.2
3,483,526	-		PGA1_c33240	0.49	-0.0
3,483,557	-		PGA1_c33240	0.54	-2.6
3,483,580	+		PGA1_c33240	0.58	-1.6
3,483,580	+		PGA1_c33240	0.58	-0.6
3,483,580	+		PGA1_c33240	0.58	+0.2
3,483,580	+		PGA1_c33240	0.58	+0.6
3,483,580	+		PGA1_c33240	0.58	-0.2
3,483,671	+		PGA1_c33240	0.72	-1.2
3,483,679	-		PGA1_c33240	0.73	-0.2
3,483,807	+				-0.3
3,483,851	+				-0.9
3,483,918	-		PGA1_c33250	0.34	+0.2
3,483,929	+		PGA1_c33250	0.40	-0.7
3,483,935	-		PGA1_c33250	0.43	+0.2
3,483,937	+		PGA1_c33250	0.43	+0.2
3,483,937	+		PGA1_c33250	0.43	-1.1
3,484,055	-				-1.4
3,484,102	-				-0.7
3,484,122	-				+0.5
3,484,161	+				-0.7