Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32190

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,374,879	+		PGA1_c32180	0.10	+0.2
3,374,995	-		PGA1_c32180	0.22	+0.0
3,375,033	-		PGA1_c32180	0.26	-2.2
3,375,039	-		PGA1_c32180	0.27	+1.0
3,375,079	+		PGA1_c32180	0.31	-0.1
3,375,087	-		PGA1_c32180	0.31	-0.4
3,375,087	-		PGA1_c32180	0.31	+0.7
3,375,087	-		PGA1_c32180	0.31	+0.9
3,375,096	+		PGA1_c32180	0.32	-0.4
3,375,096	+		PGA1_c32180	0.32	+0.2
3,375,153	+		PGA1_c32180	0.38	+1.6
3,375,182	-		PGA1_c32180	0.41	-1.3
3,375,235	-		PGA1_c32180	0.46	-1.2
3,375,277	-		PGA1_c32180	0.51	+1.5
3,375,287	+		PGA1_c32180	0.52	+0.7
3,375,378	+		PGA1_c32180	0.61	+0.6
3,375,487	-		PGA1_c32180	0.72	+0.3
3,375,551	-		PGA1_c32180	0.78	+0.5
3,375,567	-		PGA1_c32180	0.80	+3.2
3,375,586	+		PGA1_c32180	0.82	-0.4
3,375,619	-		PGA1_c32180	0.85	-0.4
3,375,684	-				+1.4
3,375,791	+				+0.9
3,375,820	+				-0.4
3,375,824	-				-1.2
3,375,870	-				+1.6
3,375,877	+				+1.0
3,375,885	-				-2.2
3,375,934	-				-0.4
3,376,024	-		PGA1_c32190	0.20	-0.4
3,376,072	-		PGA1_c32190	0.26	+0.3
3,376,101	+		PGA1_c32190	0.30	+0.2
3,376,101	+		PGA1_c32190	0.30	-1.5
3,376,101	+		PGA1_c32190	0.30	+0.8
3,376,104	-		PGA1_c32190	0.30	+1.3
3,376,109	-		PGA1_c32190	0.31	-1.2
3,376,109	-		PGA1_c32190	0.31	-0.2
3,376,109	-		PGA1_c32190	0.31	-1.0
3,376,111	+		PGA1_c32190	0.31	-0.8
3,376,111	+		PGA1_c32190	0.31	+0.4
3,376,125	-		PGA1_c32190	0.33	-0.7
3,376,184	+		PGA1_c32190	0.40	+2.9
3,376,200	-		PGA1_c32190	0.42	-1.0
3,376,217	+		PGA1_c32190	0.45	-0.4
3,376,224	+		PGA1_c32190	0.45	+1.2
3,376,225	-		PGA1_c32190	0.46	+0.1
3,376,228	+		PGA1_c32190	0.46	-0.1
3,376,233	-		PGA1_c32190	0.47	-0.2
3,376,294	+		PGA1_c32190	0.54	+0.3
3,376,303	-		PGA1_c32190	0.55	-0.1
3,376,400	+		PGA1_c32190	0.67	+0.5
3,376,427	+		PGA1_c32190	0.71	+1.6
3,376,470	-		PGA1_c32190	0.76	-0.2
3,376,470	-		PGA1_c32190	0.76	-0.0
3,376,470	-		PGA1_c32190	0.76	+0.5
3,376,512	+		PGA1_c32190	0.81	-0.9
3,376,512	+		PGA1_c32190	0.81	-0.2
3,376,520	-		PGA1_c32190	0.82	+0.7
3,376,520	-		PGA1_c32190	0.82	-0.3
3,376,520	-		PGA1_c32190	0.82	+0.2
3,376,533	+		PGA1_c32190	0.84	-0.2
3,376,538	-		PGA1_c32190	0.85	-0.0
3,376,541	-		PGA1_c32190	0.85	-0.1
3,376,541	-		PGA1_c32190	0.85	+1.7
3,376,554	+		PGA1_c32190	0.87	-0.6
3,376,562	-		PGA1_c32190	0.88	+0.0
3,376,610	+				-0.6
3,376,646	+				+0.2
3,376,646	+				+0.7
3,376,646	+				+0.8
3,376,647	-				+0.6
3,376,647	-				-0.6
3,376,647	-				-0.7
3,376,654	-				-0.9
3,376,654	-				-0.0
3,376,654	-				-0.8
3,376,720	-				+1.2
3,376,730	+				+0.5
3,376,758	-		PGA1_c32200	0.12	-0.4
3,376,768	+		PGA1_c32200	0.13	-0.1
3,376,803	+		PGA1_c32200	0.17	-0.8
3,376,803	+		PGA1_c32200	0.17	+0.2
3,376,803	+		PGA1_c32200	0.17	+0.2
3,376,803	+		PGA1_c32200	0.17	-0.6
3,376,803	+		PGA1_c32200	0.17	-0.4
3,376,803	+		PGA1_c32200	0.17	+0.6
3,376,811	-		PGA1_c32200	0.18	+0.5
3,376,819	+		PGA1_c32200	0.19	+1.2
3,376,907	-		PGA1_c32200	0.29	+0.9
3,376,912	-		PGA1_c32200	0.30	+1.8
3,377,034	-		PGA1_c32200	0.44	+0.2
3,377,053	+		PGA1_c32200	0.46	-0.5
3,377,070	+		PGA1_c32200	0.48	-0.9
3,377,078	-		PGA1_c32200	0.49	+0.4
3,377,098	+		PGA1_c32200	0.52	-1.2
3,377,160	-		PGA1_c32200	0.59	+0.2
3,377,258	+		PGA1_c32200	0.70	+1.2
3,377,311	-		PGA1_c32200	0.76	+0.7
3,377,334	-		PGA1_c32200	0.79	-2.2
3,377,334	-		PGA1_c32200	0.79	-0.6
3,377,334	-		PGA1_c32200	0.79	+0.2
3,377,361	-		PGA1_c32200	0.82	-0.9
3,377,361	-		PGA1_c32200	0.82	-0.8
3,377,380	-		PGA1_c32200	0.85	-0.9
3,377,384	-		PGA1_c32200	0.85	-1.3
3,377,400	+		PGA1_c32200	0.87	+1.3
3,377,466	-				+0.3
3,377,538	-				+0.7
3,377,589	+				+2.0
3,377,617	+		PGA1_c32210	0.11	+0.7
3,377,621	+		PGA1_c32210	0.11	+0.0
3,377,654	+		PGA1_c32210	0.15	+0.6
3,377,654	+		PGA1_c32210	0.15	+0.2
3,377,654	+		PGA1_c32210	0.15	+2.1