Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31590

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,298,990	+		PGA1_c31580	0.60	+0.6
3,299,067	+		PGA1_c31580	0.72	-0.8
3,299,072	+		PGA1_c31580	0.73	+0.1
3,299,096	+		PGA1_c31580	0.76	-0.1
3,299,099	+		PGA1_c31580	0.77	+0.6
3,299,104	-		PGA1_c31580	0.78	-0.3
3,299,180	+		PGA1_c31580	0.89	+0.8
3,299,190	+				-1.0
3,299,190	+				+0.5
3,299,190	+				+0.9
3,299,198	-				-1.2
3,299,198	-				+1.0
3,299,198	-				+0.3
3,299,256	-				-0.8
3,299,256	-				+0.3
3,299,258	+				+1.0
3,299,313	-				-2.1
3,299,337	+				-1.2
3,299,340	-				-0.2
3,299,345	-				-1.0
3,299,345	-				+0.2
3,299,356	+				-0.4
3,299,366	-				-0.9
3,299,418	-				+0.5
3,299,425	+				+0.4
3,299,430	+				+0.2
3,299,430	+				+1.3
3,299,430	+				+0.0
3,299,438	-				-1.5
3,299,438	-				+0.8
3,299,440	-				-0.9
3,299,449	+				+0.9
3,299,449	+				-0.9
3,299,453	-				+1.0
3,299,462	-				+0.2
3,299,469	+				-0.2
3,299,469	+				+0.8
3,299,469	+				-0.3
3,299,469	+				+1.0
3,299,469	+				-0.8
3,299,469	+				-0.3
3,299,474	+				-1.1
3,299,474	+				+1.0
3,299,477	-				-0.1
3,299,477	-				-1.3
3,299,477	-				+0.7
3,299,477	-				-0.4
3,299,482	-				+0.7
3,299,493	+				-0.2
3,299,561	-				+1.3
3,299,581	+				-0.6
3,299,581	+				-0.4
3,299,589	-				-0.0
3,299,603	+				+0.5
3,299,611	-				-1.3
3,299,613	+				-1.8
3,299,616	-				+2.3
3,299,659	+				-0.7
3,299,661	+				-0.4
3,299,661	+				-0.1
3,299,669	-				-0.4
3,299,669	-				-0.5
3,299,669	-				+1.5
3,299,687	+				-1.5
3,299,694	+				-0.2
3,299,702	+		PGA1_c31590	0.10	-0.9
3,299,702	+		PGA1_c31590	0.10	-1.2
3,299,705	-		PGA1_c31590	0.10	-0.3
3,299,710	-		PGA1_c31590	0.11	-0.8
3,299,712	+		PGA1_c31590	0.11	-2.3
3,299,729	+		PGA1_c31590	0.13	+1.2
3,299,775	-		PGA1_c31590	0.18	-0.2
3,299,802	+		PGA1_c31590	0.21	+1.1
3,299,802	+		PGA1_c31590	0.21	-0.7
3,299,802	+		PGA1_c31590	0.21	+1.1
3,299,802	+		PGA1_c31590	0.21	-0.9
3,299,802	+		PGA1_c31590	0.21	+1.0
3,299,802	+		PGA1_c31590	0.21	-0.9
3,299,802	+		PGA1_c31590	0.21	-0.4
3,299,802	+		PGA1_c31590	0.21	-0.7
3,299,810	+		PGA1_c31590	0.22	-0.5
3,299,810	-		PGA1_c31590	0.22	-0.5
3,299,810	-		PGA1_c31590	0.22	-0.0
3,299,810	-		PGA1_c31590	0.22	-0.7
3,299,810	-		PGA1_c31590	0.22	+0.9
3,299,810	-		PGA1_c31590	0.22	+1.1
3,299,810	-		PGA1_c31590	0.22	-0.2
3,299,839	+		PGA1_c31590	0.25	+0.2
3,299,842	-		PGA1_c31590	0.25	-1.1
3,299,860	+		PGA1_c31590	0.27	-1.5
3,299,860	+		PGA1_c31590	0.27	-1.9
3,299,860	+		PGA1_c31590	0.27	-1.6
3,299,868	-		PGA1_c31590	0.28	+0.1
3,299,878	-		PGA1_c31590	0.29	-0.1
3,299,887	+		PGA1_c31590	0.30	-0.3
3,299,966	-		PGA1_c31590	0.38	-0.6
3,299,978	+		PGA1_c31590	0.39	+0.6
3,300,002	-		PGA1_c31590	0.42	+0.9
3,300,027	+		PGA1_c31590	0.45	-0.6
3,300,035	-		PGA1_c31590	0.45	-0.9
3,300,079	-		PGA1_c31590	0.50	-0.7
3,300,092	+		PGA1_c31590	0.52	-0.1
3,300,095	-		PGA1_c31590	0.52	-0.4
3,300,121	-		PGA1_c31590	0.55	-1.0
3,300,136	+		PGA1_c31590	0.56	-0.9
3,300,136	+		PGA1_c31590	0.56	-1.6
3,300,136	+		PGA1_c31590	0.56	+0.1
3,300,136	+		PGA1_c31590	0.56	+0.9
3,300,136	+		PGA1_c31590	0.56	-0.1
3,300,136	+		PGA1_c31590	0.56	-2.1
3,300,144	-		PGA1_c31590	0.57	+0.1
3,300,144	-		PGA1_c31590	0.57	-0.2
3,300,144	-		PGA1_c31590	0.57	+1.3
3,300,146	+		PGA1_c31590	0.57	+0.2
3,300,146	+		PGA1_c31590	0.57	+0.4
3,300,146	+		PGA1_c31590	0.57	-1.4
3,300,146	-		PGA1_c31590	0.57	+0.3
3,300,151	+		PGA1_c31590	0.58	-0.3
3,300,151	+		PGA1_c31590	0.58	+0.8
3,300,151	+		PGA1_c31590	0.58	-1.6
3,300,151	+		PGA1_c31590	0.58	-0.0
3,300,154	-		PGA1_c31590	0.58	+1.0
3,300,154	-		PGA1_c31590	0.58	-0.0
3,300,154	-		PGA1_c31590	0.58	-1.3
3,300,154	-		PGA1_c31590	0.58	-0.1
3,300,159	-		PGA1_c31590	0.59	-0.8
3,300,159	-		PGA1_c31590	0.59	-2.0
3,300,209	+		PGA1_c31590	0.64	-0.7
3,300,432	+		PGA1_c31590	0.88	-0.5
3,300,435	-		PGA1_c31590	0.88	-0.6
3,300,440	-		PGA1_c31590	0.89	-0.3
3,300,450	+		PGA1_c31590	0.90	-0.7
3,300,472	-				-0.3
3,300,477	-				-0.5
3,300,479	+				-0.1
3,300,487	-				+1.7
3,300,487	-				+0.5
3,300,488	+				+0.1
3,300,541	+				-1.6
3,300,549	-				-1.6
3,300,549	-				-1.6
3,300,549	-				+0.1
3,300,549	-				+0.2
3,300,549	-				+0.3
3,300,581	+				-0.2
3,300,584	+				-0.6
3,300,589	-				+1.1
3,300,606	+				-0.4
3,300,608	+				+1.0
3,300,667	-				+0.6
3,300,668	+				-0.5
3,300,678	+				-1.8
3,300,732	-				-1.9
3,300,750	+				+1.2
3,300,758	-				+0.4
3,300,809	+		PGA1_c31600	0.10	-0.2
3,300,817	-		PGA1_c31600	0.11	-0.0
3,300,817	-		PGA1_c31600	0.11	-2.1
3,300,845	+		PGA1_c31600	0.15	-1.4
3,300,848	+		PGA1_c31600	0.15	+1.8
3,300,903	+		PGA1_c31600	0.21	+0.2
3,300,916	+		PGA1_c31600	0.23	-1.4
3,300,916	+		PGA1_c31600	0.23	-1.0
3,300,939	+		PGA1_c31600	0.26	-0.0
3,301,019	-		PGA1_c31600	0.35	+0.2
3,301,047	+		PGA1_c31600	0.39	-0.3
3,301,058	-		PGA1_c31600	0.40	+1.8
3,301,177	-		PGA1_c31600	0.54	+0.6
3,301,219	+		PGA1_c31600	0.59	+0.3
3,301,245	+		PGA1_c31600	0.62	-0.9
3,301,327	+		PGA1_c31600	0.72	-1.0
3,301,358	+		PGA1_c31600	0.76	-0.2
3,301,382	+		PGA1_c31600	0.79	-0.0
3,301,430	-		PGA1_c31600	0.85	+1.4
3,301,430	-		PGA1_c31600	0.85	-2.3
3,301,436	-		PGA1_c31600	0.85	-0.0
3,301,470	+		PGA1_c31600	0.89	+0.1
3,301,470	+		PGA1_c31600	0.89	-0.2
3,301,475	+				-1.9
3,301,498	+				+1.1
3,301,508	+				+0.2
3,301,537	+				+0.7