Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19400

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,017,230	-		PGA1_c19380	0.51	-0.0
2,017,230	-		PGA1_c19380	0.51	-0.0
2,017,237	+		PGA1_c19380	0.52	+0.3
2,017,237	+		PGA1_c19380	0.52	-0.6
2,017,237	+		PGA1_c19380	0.52	-0.1
2,017,237	+		PGA1_c19380	0.52	-1.9
2,017,245	-		PGA1_c19380	0.54	+0.1
2,017,245	-		PGA1_c19380	0.54	-0.1
2,017,245	-		PGA1_c19380	0.54	+0.6
2,017,245	-		PGA1_c19380	0.54	-2.5
2,017,245	-		PGA1_c19380	0.54	-0.4
2,017,245	-		PGA1_c19380	0.54	-1.0
2,017,245	-		PGA1_c19380	0.54	-1.7
2,017,247	+		PGA1_c19380	0.54	-0.7
2,017,255	-		PGA1_c19380	0.55	+0.8
2,017,256	+		PGA1_c19380	0.55	+0.8
2,017,261	+		PGA1_c19380	0.56	-0.1
2,017,261	+		PGA1_c19380	0.56	-0.0
2,017,269	-		PGA1_c19380	0.57	-0.1
2,017,269	-		PGA1_c19380	0.57	+0.8
2,017,291	+		PGA1_c19380	0.61	-0.9
2,017,293	-		PGA1_c19380	0.61	+1.1
2,017,299	-		PGA1_c19380	0.62	-0.4
2,017,312	-		PGA1_c19380	0.64	-0.3
2,017,331	+		PGA1_c19380	0.67	+0.4
2,017,341	+		PGA1_c19380	0.69	-2.3
2,017,346	+		PGA1_c19380	0.70	-1.1
2,017,346	+		PGA1_c19380	0.70	+0.2
2,017,346	+		PGA1_c19380	0.70	+1.5
2,017,346	+		PGA1_c19380	0.70	-0.2
2,017,346	+		PGA1_c19380	0.70	+1.3
2,017,346	+		PGA1_c19380	0.70	-0.2
2,017,346	+		PGA1_c19380	0.70	+0.3
2,017,349	-		PGA1_c19380	0.70	-0.2
2,017,349	-		PGA1_c19380	0.70	+0.1
2,017,349	-		PGA1_c19380	0.70	-0.7
2,017,354	-		PGA1_c19380	0.71	-0.1
2,017,354	-		PGA1_c19380	0.71	-0.5
2,017,354	-		PGA1_c19380	0.71	-1.4
2,017,354	-		PGA1_c19380	0.71	+0.3
2,017,354	-		PGA1_c19380	0.71	+0.1
2,017,354	-		PGA1_c19380	0.71	+0.7
2,017,378	+		PGA1_c19380	0.75	-0.4
2,017,378	+		PGA1_c19380	0.75	+0.3
2,017,378	+		PGA1_c19380	0.75	+0.2
2,017,378	+		PGA1_c19380	0.75	-0.3
2,017,378	+		PGA1_c19380	0.75	+1.0
2,017,378	+		PGA1_c19380	0.75	-0.0
2,017,386	-		PGA1_c19380	0.76	+0.6
2,017,386	-		PGA1_c19380	0.76	+1.5
2,017,386	-		PGA1_c19380	0.76	-0.3
2,017,386	-		PGA1_c19380	0.76	-0.5
2,017,386	-		PGA1_c19380	0.76	-0.1
2,017,388	+		PGA1_c19380	0.76	+0.2
2,017,388	+		PGA1_c19380	0.76	-0.2
2,017,388	+		PGA1_c19380	0.76	-0.1
2,017,391	-		PGA1_c19380	0.77	-0.1
2,017,393	+		PGA1_c19380	0.77	+0.4
2,017,396	-		PGA1_c19380	0.77	-1.6
2,017,396	-		PGA1_c19380	0.77	-0.7
2,017,396	-		PGA1_c19380	0.77	+0.1
2,017,435	+		PGA1_c19380	0.84	+1.3
2,017,443	-		PGA1_c19380	0.85	-0.7
2,017,488	+				+1.1
2,017,496	-				+0.5
2,017,511	-				-0.0
2,017,513	+				+0.3
2,017,513	+				+0.1
2,017,513	+				+1.4
2,017,513	+				-0.3
2,017,513	+				+0.0
2,017,513	+				-0.0
2,017,513	+				+0.6
2,017,513	+				-0.5
2,017,513	+				+0.3
2,017,513	+				-0.4
2,017,513	+				-0.2
2,017,513	+				+0.5
2,017,513	+				-0.8
2,017,513	+				+0.3
2,017,513	+				-0.4
2,017,513	+				+0.6
2,017,513	+				-0.0
2,017,513	+				-0.1
2,017,513	+				+0.3
2,017,513	+				-0.4
2,017,513	+				-1.1
2,017,513	+				+0.8
2,017,513	+				-0.5
2,017,513	+				+0.4
2,017,513	+				-0.3
2,017,513	+				-0.2
2,017,513	+				-1.1
2,017,513	+				-0.1
2,017,513	+				+0.9
2,017,513	+				-1.4
2,017,513	+				-0.2
2,017,513	+				+0.6
2,017,513	+				+0.3
2,017,513	+				+0.5
2,017,513	+				-1.6
2,017,513	+				-2.4
2,017,513	+				+0.0
2,017,513	+				-0.1
2,017,513	+				-0.9
2,017,521	+				+0.4
2,017,521	+				-2.0
2,017,521	+				-1.0
2,017,521	+				-1.3
2,017,521	+				-1.1
2,017,521	+				+0.0
2,017,521	-				-0.6
2,017,521	-				-0.0
2,017,521	-				-0.3
2,017,521	-				+0.8
2,017,521	-				+1.0
2,017,521	-				-0.9
2,017,521	-				+1.1
2,017,521	-				-0.4
2,017,521	-				-0.6
2,017,521	-				-0.1
2,017,521	-				-0.0
2,017,521	-				+0.3
2,017,521	-				+0.2
2,017,521	-				-1.6
2,017,521	-				+0.4
2,017,521	-				+0.3
2,017,521	-				-0.9
2,017,521	-				+0.9
2,017,521	-				+0.0
2,017,521	-				+0.5
2,017,521	-				-3.2
2,017,521	-				-1.1
2,017,521	-				-1.7
2,017,521	-				-0.7
2,017,521	-				+1.0
2,017,521	-				+0.7
2,017,521	-				+0.2
2,017,521	-				-1.4
2,017,521	-				+0.4
2,017,521	-				-0.4
2,017,521	-				-0.3
2,017,521	-				-0.7
2,017,521	-				+0.3
2,017,521	-				+0.4
2,017,521	-				+0.0
2,017,521	-				+0.7
2,017,521	-				-0.4
2,017,521	-				+0.7
2,017,521	-				+0.0
2,017,521	-				-0.0
2,017,529	-				+0.9
2,017,529	-				+1.3
2,017,529	-				+0.5
2,017,529	-				-0.0
2,017,529	-				+0.1
2,017,546	+				+0.8
2,017,556	+				-0.2
2,017,558	+				-0.1
2,017,558	+				-1.0
2,017,559	+				+1.0
2,017,559	+				-0.7
2,017,559	+				-0.3
2,017,559	+				-0.4
2,017,559	+				+0.4
2,017,567	-				+0.3
2,017,567	-				+1.1
2,017,572	+				+0.8
2,017,572	+				-1.0
2,017,572	+				-0.5
2,017,572	+				-1.2
2,017,572	+				-0.7
2,017,577	+				+0.3
2,017,580	-				+0.5
2,017,580	-				+0.6
2,017,580	-				+1.5
2,017,628	+				+0.6
2,017,634	-				-2.6
2,017,634	-				+0.2
2,017,676	-				-0.3
2,017,763	-				-0.7
2,017,765	-				-0.2
2,017,767	+				-0.5
2,017,800	+				-0.6
2,017,800	+				-1.1
2,017,801	+				+1.4
2,017,801	+				+0.7
2,017,801	+				-0.5
2,017,801	+				+0.2
2,017,809	-				+0.2
2,017,809	-				-0.4
2,017,809	-				+0.6
2,017,809	-				+0.1
2,017,809	-				+1.4
2,017,809	-				-0.7
2,017,809	-				-2.3
2,017,809	-				+0.4
2,017,809	-				-0.5
2,017,809	-				-0.9
2,017,809	-				+0.3
2,017,809	-				+0.3
2,017,810	+				+0.4
2,017,815	+				+0.6
2,017,823	-				-0.3
2,017,823	-				+0.9
2,017,838	-				-0.2
2,017,863	+				-1.3
2,017,877	+				-0.7
2,017,882	+				+0.5
2,017,887	+				+1.0
2,017,887	+				-1.2
2,017,895	-				-1.6
2,017,905	-				-0.0
2,017,920	+				-0.7
2,017,920	+				+0.6
2,017,928	-				-0.4
2,017,928	-				-0.7
2,017,932	+				-1.1
2,017,932	+				-0.3
2,017,932	+				-1.9
2,017,940	+				-0.5
2,017,940	-				-0.3
2,017,940	-				-0.2
2,017,951	+				+1.0
2,017,959	-				-2.0
2,017,959	-				+1.4
2,017,977	-				-0.5
2,017,980	-				-0.4
2,017,986	+				+3.0
2,017,996	+				+0.6
2,017,996	+				-1.0
2,018,004	-				+0.9
2,018,007	+				+0.4
2,018,007	+				-0.4
2,018,007	+				-1.5
2,018,007	+				+0.3
2,018,015	-				+0.6
2,018,015	-				-1.1
2,018,032	-				-1.1
2,018,038	-				-1.3
2,018,052	-				-1.2
2,018,069	-				+0.8
2,018,137	+				+0.6
2,018,137	+				-2.9
2,018,137	+				+1.6
2,018,137	+				-2.4
2,018,137	+				+0.3
2,018,137	+				-1.5
2,018,137	+				+0.2
2,018,145	-				+0.7
2,018,145	-				+0.4
2,018,145	-				+0.7
2,018,145	-				+0.1
2,018,145	-				-0.1
2,018,147	+				-0.7
2,018,147	+				+0.3
2,018,155	-				+0.1
2,018,168	-				-0.0
2,018,184	+				-1.5
2,018,186	-				-3.2
2,018,192	-				-0.7
2,018,192	-				-0.4
2,018,194	-				-0.4
2,018,194	-				-0.3
2,018,194	-				-0.7
2,018,201	+				+1.1
2,018,204	-				-1.4
2,018,209	-				+0.4
2,018,228	+				+0.6
2,018,236	-				+0.1
2,018,236	-				-0.6
2,018,271	+				+0.3
2,018,272	-				+0.6
2,018,279	-		PGA1_c19400	0.11	+0.8
2,018,279	-		PGA1_c19400	0.11	-0.5
2,018,279	-		PGA1_c19400	0.11	+0.2
2,018,321	+		PGA1_c19400	0.20	-1.2
2,018,329	-		PGA1_c19400	0.21	-0.0
2,018,346	+		PGA1_c19400	0.25	-0.2
2,018,346	+		PGA1_c19400	0.25	-0.5
2,018,354	-		PGA1_c19400	0.27	+0.8
2,018,354	-		PGA1_c19400	0.27	-0.9
2,018,354	-		PGA1_c19400	0.27	-1.0
2,018,364	+		PGA1_c19400	0.29	+0.5
2,018,364	+		PGA1_c19400	0.29	-1.6
2,018,364	+		PGA1_c19400	0.29	+1.3
2,018,364	+		PGA1_c19400	0.29	-0.4
2,018,372	-		PGA1_c19400	0.31	-2.2
2,018,372	-		PGA1_c19400	0.31	-0.5
2,018,372	-		PGA1_c19400	0.31	+0.0
2,018,372	-		PGA1_c19400	0.31	-0.7
2,018,372	-		PGA1_c19400	0.31	-0.4
2,018,381	-		PGA1_c19400	0.32	+1.3
2,018,381	-		PGA1_c19400	0.32	-2.1
2,018,474	-		PGA1_c19400	0.52	-1.5
2,018,496	+		PGA1_c19400	0.57	-1.8
2,018,504	-		PGA1_c19400	0.59	+0.8
2,018,540	+		PGA1_c19400	0.67	-0.7
2,018,541	+		PGA1_c19400	0.67	-0.1
2,018,555	+		PGA1_c19400	0.70	-0.2
2,018,563	-		PGA1_c19400	0.72	+0.1
2,018,573	-		PGA1_c19400	0.74	-1.0
2,018,584	+		PGA1_c19400	0.76	-0.5
2,018,590	+		PGA1_c19400	0.77	-0.2
2,018,592	-		PGA1_c19400	0.78	-0.6
2,018,592	-		PGA1_c19400	0.78	-0.5
2,018,592	-		PGA1_c19400	0.78	+1.0
2,018,592	-		PGA1_c19400	0.78	-1.3
2,018,596	-		PGA1_c19400	0.79	-1.8
2,018,596	-		PGA1_c19400	0.79	-1.1
2,018,604	+		PGA1_c19400	0.80	-0.5
2,018,612	-		PGA1_c19400	0.82	-0.9
2,018,612	-		PGA1_c19400	0.82	-1.4
2,018,617	+		PGA1_c19400	0.83	+1.6
2,018,617	+		PGA1_c19400	0.83	-0.3
2,018,619	-		PGA1_c19400	0.84	-0.6
2,018,625	-		PGA1_c19400	0.85	-0.3
2,018,625	-		PGA1_c19400	0.85	-0.1
2,018,754	+				+0.4
2,018,780	+				-1.6
2,018,793	+				+1.1
2,018,798	+				+0.2
2,018,798	+				-0.0
2,018,798	+				+0.7
2,018,801	-				-0.3
2,018,853	+				-0.3
2,018,853	+				+1.4
2,018,853	-				+0.1
2,018,861	-				+0.2
2,018,869	+				+0.5
2,018,877	-				-0.0
2,018,911	-				-1.1
2,018,928	+				+0.2
2,018,928	+				-2.2
2,018,928	+				-0.4
2,018,928	+				-0.1
2,018,936	-				-1.1
2,018,936	-				+1.2
2,018,936	-				+1.7
2,018,936	-				-0.1
2,018,945	+				+0.8
2,018,953	-				+0.2
2,018,953	-				-1.3
2,018,963	-				+2.0
2,019,032	+				+0.3
2,019,092	-		PGA1_c19410	0.11	+0.5
2,019,103	-		PGA1_c19410	0.12	-1.0
2,019,103	-		PGA1_c19410	0.12	+0.9
2,019,103	-		PGA1_c19410	0.12	+0.2
2,019,122	+		PGA1_c19410	0.13	+1.9
2,019,130	-		PGA1_c19410	0.13	-0.7
2,019,135	-		PGA1_c19410	0.13	-0.9
2,019,184	-		PGA1_c19410	0.15	-1.0
2,019,226	+		PGA1_c19410	0.17	-0.2
2,019,252	-		PGA1_c19410	0.18	-0.7
2,019,252	-		PGA1_c19410	0.18	+0.4
2,019,252	-		PGA1_c19410	0.18	-1.3
2,019,264	-		PGA1_c19410	0.19	-0.1
2,019,268	-		PGA1_c19410	0.19	-0.0
2,019,292	-		PGA1_c19410	0.20	+0.9
2,019,292	-		PGA1_c19410	0.20	+0.7
2,019,297	-		PGA1_c19410	0.20	+0.4
2,019,307	-		PGA1_c19410	0.20	+0.3
2,019,308	-		PGA1_c19410	0.20	+0.7
2,019,355	+		PGA1_c19410	0.22	-1.5
2,019,355	+		PGA1_c19410	0.22	+0.8
2,019,397	+		PGA1_c19410	0.24	+0.5
2,019,399	+		PGA1_c19410	0.24	-2.2
2,019,416	+		PGA1_c19410	0.25	+0.3
2,019,421	+		PGA1_c19410	0.25	+0.4
2,019,424	-		PGA1_c19410	0.25	+0.7
2,019,424	-		PGA1_c19410	0.25	+0.1
2,019,429	-		PGA1_c19410	0.26	-0.6
2,019,475	+		PGA1_c19410	0.27	-1.0
2,019,527	-		PGA1_c19410	0.30	-0.9
2,019,569	+		PGA1_c19410	0.31	+0.7
2,019,569	+		PGA1_c19410	0.31	-2.0
2,019,576	+		PGA1_c19410	0.32	-1.9
2,019,577	-		PGA1_c19410	0.32	-1.2
2,019,577	-		PGA1_c19410	0.32	-0.1
2,019,577	-		PGA1_c19410	0.32	+0.6
2,019,596	-		PGA1_c19410	0.33	+0.5
2,019,631	+		PGA1_c19410	0.34	+0.6
2,019,639	+		PGA1_c19410	0.34	+0.1
2,019,657	-		PGA1_c19410	0.35	-1.6
2,019,666	+		PGA1_c19410	0.36	+0.6