Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22270

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,356,371	+		ABZR87_RS22260	0.87	-3.2
1,356,414	-				-0.7
1,356,414	-				-2.1
1,356,414	-				-1.4
1,356,458	+				-0.1
1,356,459	-				-1.5
1,356,459	-				-2.1
1,356,499	+				-0.9
1,356,499	+				-2.3
1,356,499	+				-1.6
1,356,500	-				-0.1
1,356,500	-				+0.0
1,356,500	-				-0.1
1,356,563	-				-1.0
1,356,628	+		ABZR87_RS22265	0.17	-2.8
1,356,628	+		ABZR87_RS22265	0.17	-3.9
1,356,628	+		ABZR87_RS22265	0.17	-2.7
1,356,628	+		ABZR87_RS22265	0.17	-1.7
1,356,629	-		ABZR87_RS22265	0.17	-3.3
1,356,940	+		ABZR87_RS22265	0.56	-2.7
1,356,941	-		ABZR87_RS22265	0.57	-3.3
1,356,941	-		ABZR87_RS22265	0.57	-2.6
1,357,144	+		ABZR87_RS22265	0.83	-1.6
1,357,145	-		ABZR87_RS22265	0.83	-0.7
1,357,371	+				-1.1
1,357,372	-				-0.9
1,357,632	+		ABZR87_RS22270	0.42	+0.7
1,357,633	-		ABZR87_RS22270	0.42	-0.2
1,357,763	+		ABZR87_RS22270	0.60	-1.1
1,357,763	+		ABZR87_RS22270	0.60	-1.6
1,357,763	+		ABZR87_RS22270	0.60	-0.9
1,357,763	+		ABZR87_RS22270	0.60	-0.5
1,357,764	-		ABZR87_RS22270	0.60	-1.1
1,357,764	-		ABZR87_RS22270	0.60	-1.4
1,357,764	-		ABZR87_RS22270	0.60	-1.4
1,357,764	-		ABZR87_RS22270	0.60	-2.2
1,357,764	-		ABZR87_RS22270	0.60	-1.1
1,357,764	-		ABZR87_RS22270	0.60	-2.5
1,357,764	-		ABZR87_RS22270	0.60	-2.5
1,357,892	+		ABZR87_RS22270	0.77	-1.1
1,357,892	+		ABZR87_RS22270	0.77	-0.6
1,357,892	+		ABZR87_RS22270	0.77	-0.3
1,357,892	+		ABZR87_RS22270	0.77	-1.7
1,357,893	-		ABZR87_RS22270	0.78	-0.6
1,357,893	-		ABZR87_RS22270	0.78	-2.3
1,357,893	-		ABZR87_RS22270	0.78	-3.0
1,357,932	+		ABZR87_RS22270	0.83	-0.3
1,358,024	-				-0.5
1,358,042	+				-0.0
1,358,042	+				-1.6
1,358,042	+				-1.0
1,358,043	-				-0.6
1,358,043	-				-1.5
1,358,043	-				-1.1
1,358,105	+				-1.4
1,358,105	+				-0.4
1,358,105	+				-0.9
1,358,106	-				-1.7
1,358,106	-				-1.0
1,358,106	-				+2.7
1,358,106	-				-0.3
1,358,168	+				-1.0
1,358,274	+		ABZR87_RS22275	0.14	-0.4
1,358,438	+		ABZR87_RS22275	0.28	-1.7
1,358,463	-		ABZR87_RS22275	0.30	-1.3
1,358,511	-		ABZR87_RS22275	0.34	-2.3
1,358,666	+		ABZR87_RS22275	0.46	-1.5
1,358,666	+		ABZR87_RS22275	0.46	-0.6
1,358,667	-		ABZR87_RS22275	0.47	-0.6
1,358,667	-		ABZR87_RS22275	0.47	-1.2
1,358,667	-		ABZR87_RS22275	0.47	-1.4
1,358,667	-		ABZR87_RS22275	0.47	-1.5
1,358,667	-		ABZR87_RS22275	0.47	-2.1
1,358,667	-		ABZR87_RS22275	0.47	+0.3
1,358,667	-		ABZR87_RS22275	0.47	-1.2
1,358,667	-		ABZR87_RS22275	0.47	-1.1
1,358,696	+		ABZR87_RS22275	0.49	-2.3
1,358,696	+		ABZR87_RS22275	0.49	-1.6
1,358,697	-		ABZR87_RS22275	0.49	-1.6
1,358,697	-		ABZR87_RS22275	0.49	-0.7
1,358,697	-		ABZR87_RS22275	0.49	-1.5
1,358,697	-		ABZR87_RS22275	0.49	-1.1
1,358,699	+		ABZR87_RS22275	0.49	-0.4
1,358,699	+		ABZR87_RS22275	0.49	-0.4
1,358,700	-		ABZR87_RS22275	0.49	-1.2
1,358,700	-		ABZR87_RS22275	0.49	-1.5
1,358,735	+		ABZR87_RS22275	0.52	-0.3
1,358,735	+		ABZR87_RS22275	0.52	-2.5
1,358,735	+		ABZR87_RS22275	0.52	-1.6
1,358,735	+		ABZR87_RS22275	0.52	-0.5
1,358,735	+		ABZR87_RS22275	0.52	-2.4
1,358,736	-		ABZR87_RS22275	0.52	+0.7
1,358,736	-		ABZR87_RS22275	0.52	-1.7
1,358,736	-		ABZR87_RS22275	0.52	-1.5
1,358,736	-		ABZR87_RS22275	0.52	-1.1
1,358,736	-		ABZR87_RS22275	0.52	-0.6
1,358,736	-		ABZR87_RS22275	0.52	-0.5
1,358,736	-		ABZR87_RS22275	0.52	+0.2
1,358,736	-		ABZR87_RS22275	0.52	-1.1
1,359,000	+		ABZR87_RS22275	0.74	+0.6
1,359,008	+		ABZR87_RS22275	0.75	+1.0
1,359,008	+		ABZR87_RS22275	0.75	-1.9
1,359,008	+		ABZR87_RS22275	0.75	-2.6
1,359,008	+		ABZR87_RS22275	0.75	-2.7
1,359,009	-		ABZR87_RS22275	0.75	-1.4
1,359,009	-		ABZR87_RS22275	0.75	-0.9
1,359,044	+		ABZR87_RS22275	0.78	-2.3
1,359,044	+		ABZR87_RS22275	0.78	-3.0
1,359,044	+		ABZR87_RS22275	0.78	-2.5