Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22135

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,331,989	-		ABZR87_RS22125	0.89	-0.4
1,331,989	-		ABZR87_RS22125	0.89	+0.8
1,331,989	-		ABZR87_RS22125	0.89	-0.5
1,331,989	-		ABZR87_RS22125	0.89	-0.0
1,332,128	+		ABZR87_RS22130	0.12	+2.2
1,332,128	+		ABZR87_RS22130	0.12	-0.8
1,332,129	-		ABZR87_RS22130	0.12	-0.6
1,332,312	-		ABZR87_RS22130	0.38	-1.2
1,332,362	+		ABZR87_RS22130	0.45	-1.0
1,332,362	+		ABZR87_RS22130	0.45	+0.8
1,332,362	+		ABZR87_RS22130	0.45	+0.1
1,332,374	+		ABZR87_RS22130	0.46	-0.5
1,332,426	-		ABZR87_RS22130	0.54	-1.0
1,332,536	+		ABZR87_RS22130	0.69	+1.6
1,332,536	+		ABZR87_RS22130	0.69	+1.0
1,332,536	+		ABZR87_RS22130	0.69	-0.2
1,332,536	+		ABZR87_RS22130	0.69	-0.9
1,332,536	+		ABZR87_RS22130	0.69	-0.1
1,332,537	-		ABZR87_RS22130	0.69	-0.4
1,332,537	-		ABZR87_RS22130	0.69	+1.1
1,332,537	-		ABZR87_RS22130	0.69	+1.6
1,332,537	-		ABZR87_RS22130	0.69	-0.6
1,332,537	-		ABZR87_RS22130	0.69	-0.8
1,332,537	-		ABZR87_RS22130	0.69	-0.4
1,332,563	+		ABZR87_RS22130	0.73	+0.6
1,332,608	+		ABZR87_RS22130	0.79	-0.3
1,332,608	+		ABZR87_RS22130	0.79	-0.4
1,332,609	-		ABZR87_RS22130	0.79	-1.9
1,332,617	+		ABZR87_RS22130	0.80	-0.4
1,332,617	+		ABZR87_RS22130	0.80	-0.8
1,332,617	+		ABZR87_RS22130	0.80	-0.8
1,332,713	+				-0.9
1,332,713	+				-0.5
1,332,713	+				-2.5
1,332,713	+				+0.2
1,332,713	+				+0.5
1,332,713	+				-2.0
1,332,714	-				-1.6
1,332,714	-				-0.4
1,332,714	-				-0.3
1,332,714	-				-1.0
1,332,714	-				+0.3
1,332,859	+				-0.8
1,332,860	-				+0.4
1,332,860	-				-0.7
1,332,874	+				+0.1
1,332,931	+		ABZR87_RS22135	0.14	-0.2
1,333,066	+		ABZR87_RS22135	0.24	-0.5
1,333,067	-		ABZR87_RS22135	0.25	+1.2
1,333,087	+		ABZR87_RS22135	0.26	+0.3
1,333,087	+		ABZR87_RS22135	0.26	-0.3
1,333,087	+		ABZR87_RS22135	0.26	-2.2
1,333,088	-		ABZR87_RS22135	0.26	+0.3
1,333,088	-		ABZR87_RS22135	0.26	+0.2
1,333,088	-		ABZR87_RS22135	0.26	-0.0
1,333,088	-		ABZR87_RS22135	0.26	-1.6
1,333,088	-		ABZR87_RS22135	0.26	-0.7
1,333,088	-		ABZR87_RS22135	0.26	+0.0
1,333,096	+		ABZR87_RS22135	0.27	-0.5
1,333,097	-		ABZR87_RS22135	0.27	-0.4
1,333,178	+		ABZR87_RS22135	0.33	-1.0
1,333,237	+		ABZR87_RS22135	0.38	-0.9
1,333,255	+		ABZR87_RS22135	0.39	-0.4
1,333,255	+		ABZR87_RS22135	0.39	-0.5
1,333,255	+		ABZR87_RS22135	0.39	+0.1
1,333,255	+		ABZR87_RS22135	0.39	+0.6
1,333,256	-		ABZR87_RS22135	0.39	+0.2
1,333,256	-		ABZR87_RS22135	0.39	-0.1
1,333,256	-		ABZR87_RS22135	0.39	-0.2
1,333,256	-		ABZR87_RS22135	0.39	+0.2
1,333,256	-		ABZR87_RS22135	0.39	-0.1
1,333,327	+		ABZR87_RS22135	0.45	+0.3
1,333,327	+		ABZR87_RS22135	0.45	+0.2
1,333,327	+		ABZR87_RS22135	0.45	+0.7
1,333,327	+		ABZR87_RS22135	0.45	-0.9
1,333,327	+		ABZR87_RS22135	0.45	-0.4
1,333,360	+		ABZR87_RS22135	0.48	-1.0
1,333,360	+		ABZR87_RS22135	0.48	+0.2
1,333,360	+		ABZR87_RS22135	0.48	+0.1
1,333,361	-		ABZR87_RS22135	0.48	-0.5
1,333,361	-		ABZR87_RS22135	0.48	-0.6
1,333,361	-		ABZR87_RS22135	0.48	-0.9
1,333,387	+		ABZR87_RS22135	0.50	+0.1
1,333,387	+		ABZR87_RS22135	0.50	-0.7
1,333,432	+		ABZR87_RS22135	0.53	-0.4
1,333,433	-		ABZR87_RS22135	0.53	-0.3
1,333,433	-		ABZR87_RS22135	0.53	-1.4
1,333,433	-		ABZR87_RS22135	0.53	+1.0
1,333,433	-		ABZR87_RS22135	0.53	+0.0
1,333,453	+		ABZR87_RS22135	0.55	-0.7
1,333,454	-		ABZR87_RS22135	0.55	-0.4
1,333,471	+		ABZR87_RS22135	0.56	-0.6
1,333,472	-		ABZR87_RS22135	0.56	+0.9
1,333,553	-		ABZR87_RS22135	0.63	-0.7
1,333,553	-		ABZR87_RS22135	0.63	+0.4
1,333,693	+		ABZR87_RS22135	0.74	+0.3
1,333,693	+		ABZR87_RS22135	0.74	-0.6
1,333,693	+		ABZR87_RS22135	0.74	+0.2
1,333,694	-		ABZR87_RS22135	0.74	-0.5
1,333,694	-		ABZR87_RS22135	0.74	-0.2
1,333,694	-		ABZR87_RS22135	0.74	-2.4
1,333,694	-		ABZR87_RS22135	0.74	-0.5
1,333,694	-		ABZR87_RS22135	0.74	+0.1
1,333,694	-		ABZR87_RS22135	0.74	+0.2
1,333,696	+		ABZR87_RS22135	0.74	-0.9
1,333,697	-		ABZR87_RS22135	0.74	-0.1
1,333,697	-		ABZR87_RS22135	0.74	-0.8
1,333,697	-		ABZR87_RS22135	0.74	+0.1
1,333,750	+		ABZR87_RS22135	0.78	-0.6
1,333,751	-		ABZR87_RS22135	0.78	-0.5
1,333,751	-		ABZR87_RS22135	0.78	-1.1
1,333,783	+		ABZR87_RS22135	0.81	+1.0
1,333,783	+		ABZR87_RS22135	0.81	-0.4
1,333,784	-		ABZR87_RS22135	0.81	-0.0
1,333,825	+		ABZR87_RS22135	0.84	-0.4
1,333,825	+		ABZR87_RS22135	0.84	-0.6
1,333,826	-		ABZR87_RS22135	0.84	-0.3
1,333,826	-		ABZR87_RS22135	0.84	+0.9
1,333,826	-		ABZR87_RS22135	0.84	-0.5
1,333,830	+		ABZR87_RS22135	0.84	+0.1
1,334,345	-				-0.5
1,334,514	+				-1.5
1,334,514	+				-0.9
1,334,542	-				-0.0
1,334,887	+		ABZR87_RS22145	0.85	-0.6
1,334,887	+		ABZR87_RS22145	0.85	+0.6
1,334,887	+		ABZR87_RS22145	0.85	+0.0
1,334,887	+		ABZR87_RS22145	0.85	-0.3
1,334,888	-		ABZR87_RS22145	0.85	+0.2
1,334,888	-		ABZR87_RS22145	0.85	+0.0
1,334,888	-		ABZR87_RS22145	0.85	+0.0
1,334,888	-		ABZR87_RS22145	0.85	+0.0
1,334,888	-		ABZR87_RS22145	0.85	-0.8
1,334,918	+				+0.5
1,334,919	-				-0.6
1,334,919	-				+1.0
1,334,919	-				+0.1
1,334,919	-				-1.0