Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21020

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,099,883	+				-0.0
1,100,087	-		ABZR87_RS21015	0.18	-0.3
1,100,218	+		ABZR87_RS21015	0.32	-0.4
1,100,368	+		ABZR87_RS21015	0.49	-0.2
1,100,499	-		ABZR87_RS21015	0.63	-0.6
1,100,599	+		ABZR87_RS21015	0.73	-0.3
1,100,599	+		ABZR87_RS21015	0.73	+0.4
1,100,599	+		ABZR87_RS21015	0.73	+0.3
1,100,599	+		ABZR87_RS21015	0.73	+1.1
1,100,600	-		ABZR87_RS21015	0.73	-0.5
1,100,600	-		ABZR87_RS21015	0.73	-0.3
1,100,600	-		ABZR87_RS21015	0.73	+0.2
1,100,600	-		ABZR87_RS21015	0.73	+0.2
1,100,600	-		ABZR87_RS21015	0.73	-0.3
1,100,600	-		ABZR87_RS21015	0.73	-0.1
1,100,751	+		ABZR87_RS21015	0.90	-0.4
1,100,752	-		ABZR87_RS21015	0.90	-1.6
1,100,864	+				+0.4
1,100,864	+				-1.3
1,100,865	-				+0.7
1,100,885	+				+0.2
1,100,886	-				-1.7
1,101,033	+				-0.5
1,101,033	+				-0.4
1,101,045	+		ABZR87_RS21020	0.11	-0.5
1,101,045	+		ABZR87_RS21020	0.11	-0.4
1,101,045	+		ABZR87_RS21020	0.11	-0.2
1,101,046	-		ABZR87_RS21020	0.11	-0.3
1,101,046	-		ABZR87_RS21020	0.11	+0.4
1,101,046	-		ABZR87_RS21020	0.11	+0.3
1,101,046	-		ABZR87_RS21020	0.11	+1.1
1,101,102	+		ABZR87_RS21020	0.14	-1.8
1,101,103	-		ABZR87_RS21020	0.14	+0.0
1,101,123	+		ABZR87_RS21020	0.16	+0.8
1,101,141	+		ABZR87_RS21020	0.17	+0.3
1,101,141	+		ABZR87_RS21020	0.17	+0.5
1,101,141	+		ABZR87_RS21020	0.17	-1.0
1,101,141	+		ABZR87_RS21020	0.17	-0.3
1,101,141	+		ABZR87_RS21020	0.17	-0.7
1,101,142	-		ABZR87_RS21020	0.17	+0.5
1,101,142	-		ABZR87_RS21020	0.17	-1.3
1,101,194	-		ABZR87_RS21020	0.20	-1.2
1,101,194	-		ABZR87_RS21020	0.20	+0.1
1,101,459	+		ABZR87_RS21020	0.37	+0.0
1,101,460	-		ABZR87_RS21020	0.37	-1.3
1,101,470	+		ABZR87_RS21020	0.38	-0.3
1,101,471	-		ABZR87_RS21020	0.38	+3.1
1,101,471	-		ABZR87_RS21020	0.38	-0.3
1,101,471	-		ABZR87_RS21020	0.38	-0.3
1,101,474	+		ABZR87_RS21020	0.38	-0.7
1,101,474	+		ABZR87_RS21020	0.38	-1.7
1,101,474	+		ABZR87_RS21020	0.38	+0.6
1,101,475	-		ABZR87_RS21020	0.38	-0.6
1,101,544	-		ABZR87_RS21020	0.43	-0.3
1,101,952	-		ABZR87_RS21020	0.69	-1.1
1,102,135	-		ABZR87_RS21020	0.81	+0.5
1,102,203	+		ABZR87_RS21020	0.86	+0.0
1,102,203	+		ABZR87_RS21020	0.86	+0.1
1,102,204	-		ABZR87_RS21020	0.86	-0.2
1,102,204	-		ABZR87_RS21020	0.86	-0.6
1,102,204	-		ABZR87_RS21020	0.86	-0.3
1,102,204	-		ABZR87_RS21020	0.86	-1.6
1,102,297	-				+1.5
1,102,297	-				-0.8
1,102,297	-				+0.0
1,102,297	-				+0.0
1,102,297	-				-1.6
1,102,297	-				+0.0
1,102,460	+				+0.5
1,102,460	+				+0.1
1,102,460	+				+0.3
1,102,460	+				+0.2
1,102,461	-				-0.0
1,102,461	-				+0.2
1,102,473	+				+0.5
1,102,473	+				+0.4
1,102,608	+		ABZR87_RS21025	0.22	-0.3
1,102,609	-		ABZR87_RS21025	0.22	-0.5
1,102,681	-		ABZR87_RS21025	0.34	-0.2
1,102,767	-		ABZR87_RS21025	0.48	+0.3
1,102,827	+		ABZR87_RS21025	0.58	-0.5
1,102,828	-		ABZR87_RS21025	0.58	-0.7
1,102,839	-		ABZR87_RS21025	0.60	+0.3
1,102,887	+		ABZR87_RS21025	0.68	+0.3
1,102,887	+		ABZR87_RS21025	0.68	+0.9
1,102,888	-		ABZR87_RS21025	0.68	+0.2
1,102,903	-		ABZR87_RS21025	0.70	-2.2
1,102,903	-		ABZR87_RS21025	0.70	+0.1
1,102,924	+		ABZR87_RS21025	0.74	+0.1
1,102,925	-		ABZR87_RS21025	0.74	+0.7
1,103,096	+				-0.0
1,103,096	+				-0.0
1,103,096	+				+0.6
1,103,096	+				+0.8
1,103,214	+				-0.7
1,103,215	-				+0.1
1,103,245	+				-1.0
1,103,314	-				+1.0
1,103,314	-				+0.2
1,103,365	+				-1.0
1,103,365	+				-2.5
1,103,365	+				+0.1
1,103,366	-				-0.2