Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15835

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
3,340,228	+		ABZR87_RS15825	0.85	-0.0
3,340,229	-		ABZR87_RS15825	0.85	-0.4
3,340,229	-		ABZR87_RS15825	0.85	-0.3
3,340,249	+		ABZR87_RS15825	0.88	+0.2
3,340,249	+		ABZR87_RS15825	0.88	+0.0
3,340,250	-		ABZR87_RS15825	0.88	-0.0
3,340,250	-		ABZR87_RS15825	0.88	+0.2
3,340,250	-		ABZR87_RS15825	0.88	-1.2
3,340,250	-		ABZR87_RS15825	0.88	+1.2
3,340,250	-		ABZR87_RS15825	0.88	-1.8
3,340,250	-		ABZR87_RS15825	0.88	+0.1
3,340,288	+				-0.5
3,340,288	+				+0.3
3,340,288	+				-1.2
3,340,289	-				-0.4
3,340,374	+				-0.8
3,340,375	-				-0.3
3,340,555	+		ABZR87_RS15830	0.30	+1.3
3,340,555	+		ABZR87_RS15830	0.30	-0.2
3,340,556	-		ABZR87_RS15830	0.30	+0.1
3,340,556	-		ABZR87_RS15830	0.30	+0.6
3,340,556	-		ABZR87_RS15830	0.30	+0.5
3,340,705	+		ABZR87_RS15830	0.50	+0.1
3,340,705	+		ABZR87_RS15830	0.50	+0.9
3,340,706	-		ABZR87_RS15830	0.50	+1.0
3,340,731	+		ABZR87_RS15830	0.54	-0.8
3,341,158	-				-0.2
3,341,187	+				+0.0
3,341,187	+				-0.5
3,341,188	-				+0.4
3,341,188	-				+0.6
3,341,188	-				+0.1
3,341,268	+		ABZR87_RS15835	0.12	-0.6
3,341,268	+		ABZR87_RS15835	0.12	-1.4
3,341,268	+		ABZR87_RS15835	0.12	-0.6
3,341,269	-		ABZR87_RS15835	0.12	-0.4
3,341,269	-		ABZR87_RS15835	0.12	-0.4
3,341,269	-		ABZR87_RS15835	0.12	-0.0
3,341,364	+		ABZR87_RS15835	0.23	-0.6
3,341,365	-		ABZR87_RS15835	0.23	-0.5
3,341,365	-		ABZR87_RS15835	0.23	+0.2
3,341,436	+		ABZR87_RS15835	0.30	-0.2
3,341,436	+		ABZR87_RS15835	0.30	-1.0
3,341,437	-		ABZR87_RS15835	0.30	+0.4
3,341,673	+		ABZR87_RS15835	0.56	+0.7
3,341,673	+		ABZR87_RS15835	0.56	+0.3
3,341,674	-		ABZR87_RS15835	0.56	-0.3
3,341,674	-		ABZR87_RS15835	0.56	-0.4
3,341,674	-		ABZR87_RS15835	0.56	+0.5
3,341,680	-		ABZR87_RS15835	0.57	-1.3
3,341,905	-		ABZR87_RS15835	0.81	+0.7
3,342,091	+				+0.9
3,342,092	-				+0.3
3,342,092	-				-0.4
3,342,092	-				-0.2
3,342,113	+				-0.8
3,342,113	+				+0.4
3,342,114	-				-0.6
3,342,123	-				+0.1
3,342,195	+				-0.4
3,342,196	-				-0.6
3,342,226	+				-0.8
3,342,472	+		ABZR87_RS15840	0.21	+0.5
3,342,473	-		ABZR87_RS15840	0.21	-1.1
3,342,473	-		ABZR87_RS15840	0.21	+1.3
3,342,565	+		ABZR87_RS15840	0.28	+0.2
3,342,566	-		ABZR87_RS15840	0.28	+0.4
3,342,643	+		ABZR87_RS15840	0.34	+1.1
3,342,809	+		ABZR87_RS15840	0.47	+0.0
3,342,904	+		ABZR87_RS15840	0.55	-1.3
3,342,904	+		ABZR87_RS15840	0.55	-1.2
3,342,904	+		ABZR87_RS15840	0.55	-0.8
3,342,905	-		ABZR87_RS15840	0.55	-0.4
3,342,905	-		ABZR87_RS15840	0.55	+0.6
3,342,905	-		ABZR87_RS15840	0.55	-0.3
3,342,905	-		ABZR87_RS15840	0.55	+0.1
3,343,056	+		ABZR87_RS15840	0.67	-1.2
3,343,056	+		ABZR87_RS15840	0.67	+0.1
3,343,056	+		ABZR87_RS15840	0.67	-2.0
3,343,056	+		ABZR87_RS15840	0.67	+0.5
3,343,056	+		ABZR87_RS15840	0.67	-0.3