Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15830

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
3,339,494	+		ABZR87_RS15820	0.79	-1.0
3,339,494	+		ABZR87_RS15820	0.79	-0.2
3,339,494	+		ABZR87_RS15820	0.79	+0.1
3,339,494	+		ABZR87_RS15820	0.79	+0.7
3,339,495	-		ABZR87_RS15820	0.79	-0.8
3,339,563	+		ABZR87_RS15820	0.89	-0.0
3,339,563	+		ABZR87_RS15820	0.89	-1.5
3,339,563	+		ABZR87_RS15820	0.89	+0.1
3,339,564	-		ABZR87_RS15820	0.89	-0.0
3,339,606	-				+0.1
3,339,661	+				+0.5
3,339,661	+				+0.1
3,339,661	+				-0.1
3,339,661	+				-1.0
3,339,662	-				-0.2
3,339,662	-				-0.4
3,339,662	-				+0.3
3,339,666	+				+0.0
3,339,667	-				-0.2
3,339,667	-				+0.5
3,339,670	+				+0.6
3,339,670	+				-0.3
3,339,670	+				+0.5
3,339,670	+				-0.3
3,339,670	+				-0.0
3,339,670	+				-0.2
3,339,670	+				-0.4
3,339,671	-				+0.5
3,339,671	-				-0.3
3,339,671	-				+0.1
3,339,671	-				-0.0
3,339,835	+		ABZR87_RS15825	0.28	+0.1
3,339,835	+		ABZR87_RS15825	0.28	-0.7
3,339,836	-		ABZR87_RS15825	0.28	-0.6
3,339,836	-		ABZR87_RS15825	0.28	+0.2
3,339,836	-		ABZR87_RS15825	0.28	-0.4
3,339,837	+		ABZR87_RS15825	0.28	-0.7
3,339,838	-		ABZR87_RS15825	0.29	-0.4
3,339,880	+		ABZR87_RS15825	0.35	+1.3
3,339,964	+		ABZR87_RS15825	0.47	-0.1
3,339,964	+		ABZR87_RS15825	0.47	-0.3
3,339,964	+		ABZR87_RS15825	0.47	-0.3
3,339,964	+		ABZR87_RS15825	0.47	-0.6
3,339,964	+		ABZR87_RS15825	0.47	+0.2
3,339,964	+		ABZR87_RS15825	0.47	-0.8
3,340,045	+		ABZR87_RS15825	0.58	+0.1
3,340,045	+		ABZR87_RS15825	0.58	+0.3
3,340,045	+		ABZR87_RS15825	0.58	+1.3
3,340,046	-		ABZR87_RS15825	0.59	-0.5
3,340,046	-		ABZR87_RS15825	0.59	-0.4
3,340,150	+		ABZR87_RS15825	0.74	-0.0
3,340,150	+		ABZR87_RS15825	0.74	-0.4
3,340,151	-		ABZR87_RS15825	0.74	+0.7
3,340,151	-		ABZR87_RS15825	0.74	+0.0
3,340,151	-		ABZR87_RS15825	0.74	+0.1
3,340,228	+		ABZR87_RS15825	0.85	-0.0
3,340,229	-		ABZR87_RS15825	0.85	-0.4
3,340,229	-		ABZR87_RS15825	0.85	-0.3
3,340,249	+		ABZR87_RS15825	0.88	+0.2
3,340,249	+		ABZR87_RS15825	0.88	+0.0
3,340,250	-		ABZR87_RS15825	0.88	-0.0
3,340,250	-		ABZR87_RS15825	0.88	+0.2
3,340,250	-		ABZR87_RS15825	0.88	-1.2
3,340,250	-		ABZR87_RS15825	0.88	+1.2
3,340,250	-		ABZR87_RS15825	0.88	-1.8
3,340,250	-		ABZR87_RS15825	0.88	+0.1
3,340,288	+				-0.5
3,340,288	+				+0.3
3,340,288	+				-1.2
3,340,289	-				-0.4
3,340,374	+				-0.8
3,340,375	-				-0.3
3,340,555	+		ABZR87_RS15830	0.30	+1.3
3,340,555	+		ABZR87_RS15830	0.30	-0.2
3,340,556	-		ABZR87_RS15830	0.30	+0.1
3,340,556	-		ABZR87_RS15830	0.30	+0.6
3,340,556	-		ABZR87_RS15830	0.30	+0.5
3,340,705	+		ABZR87_RS15830	0.50	+0.1
3,340,705	+		ABZR87_RS15830	0.50	+0.9
3,340,706	-		ABZR87_RS15830	0.50	+1.0
3,340,731	+		ABZR87_RS15830	0.54	-0.8
3,341,158	-				-0.2
3,341,187	+				+0.0
3,341,187	+				-0.5
3,341,188	-				+0.4
3,341,188	-				+0.6
3,341,188	-				+0.1
3,341,268	+		ABZR87_RS15835	0.12	-0.6
3,341,268	+		ABZR87_RS15835	0.12	-1.4
3,341,268	+		ABZR87_RS15835	0.12	-0.6
3,341,269	-		ABZR87_RS15835	0.12	-0.4
3,341,269	-		ABZR87_RS15835	0.12	-0.4
3,341,269	-		ABZR87_RS15835	0.12	-0.0
3,341,364	+		ABZR87_RS15835	0.23	-0.6
3,341,365	-		ABZR87_RS15835	0.23	-0.5
3,341,365	-		ABZR87_RS15835	0.23	+0.2
3,341,436	+		ABZR87_RS15835	0.30	-0.2
3,341,436	+		ABZR87_RS15835	0.30	-1.0
3,341,437	-		ABZR87_RS15835	0.30	+0.4
3,341,673	+		ABZR87_RS15835	0.56	+0.7
3,341,673	+		ABZR87_RS15835	0.56	+0.3
3,341,674	-		ABZR87_RS15835	0.56	-0.3
3,341,674	-		ABZR87_RS15835	0.56	-0.4
3,341,674	-		ABZR87_RS15835	0.56	+0.5
3,341,680	-		ABZR87_RS15835	0.57	-1.3
3,341,905	-		ABZR87_RS15835	0.81	+0.7