Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14965

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
3,156,384	-				-0.6
3,156,413	+				-1.7
3,156,413	+				-1.5
3,156,414	-				+0.6
3,156,466	-				-0.5
3,156,569	+				-0.5
3,156,569	+				-0.4
3,156,569	+				-0.2
3,156,570	-				+0.2
3,156,584	+				-0.7
3,156,614	-				+0.3
3,156,664	+				+1.0
3,156,664	+				-0.6
3,156,665	-				-0.6
3,156,665	-				+0.1
3,156,778	+				+0.3
3,156,778	+				+0.4
3,156,778	+				+0.4
3,156,779	-				+0.6
3,156,779	-				+0.5
3,156,779	-				+0.1
3,156,814	-				+0.6
3,156,917	+		ABZR87_RS14960	0.24	-1.1
3,156,917	+		ABZR87_RS14960	0.24	+0.4
3,156,917	+		ABZR87_RS14960	0.24	-0.1
3,156,918	-		ABZR87_RS14960	0.25	+0.8
3,157,275	+		ABZR87_RS14960	0.87	-0.1
3,157,276	-		ABZR87_RS14960	0.88	+0.2
3,157,352	+				-0.9
3,157,353	-				-0.4
3,157,353	-				+1.6
3,157,354	+				+1.2
3,157,654	+		ABZR87_RS14965	0.71	-1.3
3,157,654	+		ABZR87_RS14965	0.71	+0.0
3,157,654	+		ABZR87_RS14965	0.71	-0.2
3,157,654	+		ABZR87_RS14965	0.71	+0.6
3,157,654	+		ABZR87_RS14965	0.71	-1.2
3,157,654	+		ABZR87_RS14965	0.71	-0.8
3,157,655	-		ABZR87_RS14965	0.71	+0.6
3,157,655	-		ABZR87_RS14965	0.71	-0.2
3,157,655	-		ABZR87_RS14965	0.71	-0.1
3,157,655	-		ABZR87_RS14965	0.71	-0.6
3,157,762	+				+1.7
3,157,763	-				+0.1
3,157,942	+		ABZR87_RS14970	0.17	-0.1
3,157,942	+		ABZR87_RS14970	0.17	-0.6
3,157,942	+		ABZR87_RS14970	0.17	-0.1
3,158,142	+		ABZR87_RS14970	0.41	-0.2
3,158,142	+		ABZR87_RS14970	0.41	-0.4
3,158,286	+		ABZR87_RS14970	0.58	-1.0
3,158,286	+		ABZR87_RS14970	0.58	+1.0
3,158,287	-		ABZR87_RS14970	0.58	-1.4
3,158,426	+		ABZR87_RS14970	0.75	-0.4
3,158,426	+		ABZR87_RS14970	0.75	-0.2
3,158,661	-				-0.6