Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13475

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
2,855,412	-				+0.7
2,855,528	+				+1.6
2,855,591	+				-0.7
2,855,591	+				-1.6
2,855,592	-				+0.2
2,855,631	+				+0.6
2,855,632	-				-0.7
2,855,906	+				-0.2
2,855,906	+				+0.4
2,855,907	-				+0.6
2,855,907	-				-0.9
2,856,065	+		ABZR87_RS13475	0.16	-1.4
2,856,066	-		ABZR87_RS13475	0.16	+0.0
2,856,365	+		ABZR87_RS13475	0.28	-1.6
2,856,365	+		ABZR87_RS13475	0.28	-0.4
2,856,365	+		ABZR87_RS13475	0.28	-0.2
2,856,365	+		ABZR87_RS13475	0.28	-0.1
2,856,365	+		ABZR87_RS13475	0.28	-0.8
2,856,366	-		ABZR87_RS13475	0.28	+0.6
2,856,366	-		ABZR87_RS13475	0.28	-1.1
2,856,366	-		ABZR87_RS13475	0.28	-0.4
2,856,500	+		ABZR87_RS13475	0.33	-0.6
2,856,501	-		ABZR87_RS13475	0.33	-1.2
2,856,770	+		ABZR87_RS13475	0.44	-0.4
2,856,770	+		ABZR87_RS13475	0.44	-1.2
2,856,770	+		ABZR87_RS13475	0.44	-0.4
2,856,770	+		ABZR87_RS13475	0.44	+0.6
2,856,771	-		ABZR87_RS13475	0.44	+0.6
2,856,771	-		ABZR87_RS13475	0.44	-1.6
2,856,771	-		ABZR87_RS13475	0.44	-1.9
2,856,771	-		ABZR87_RS13475	0.44	-0.1
2,856,975	-		ABZR87_RS13475	0.52	+0.6
2,856,975	-		ABZR87_RS13475	0.52	-1.0
2,856,975	-		ABZR87_RS13475	0.52	+0.6
2,857,009	+		ABZR87_RS13475	0.53	-1.6
2,857,010	-		ABZR87_RS13475	0.53	+2.0
2,857,010	-		ABZR87_RS13475	0.53	+0.0
2,857,170	-		ABZR87_RS13475	0.59	-1.2
2,857,277	+		ABZR87_RS13475	0.64	-2.7
2,857,335	-		ABZR87_RS13475	0.66	-0.7
2,857,376	+		ABZR87_RS13475	0.68	-1.0
2,857,568	+		ABZR87_RS13475	0.75	-1.1
2,857,568	+		ABZR87_RS13475	0.75	-0.4
2,857,568	+		ABZR87_RS13475	0.75	-0.7
2,857,569	-		ABZR87_RS13475	0.75	-1.1
2,857,569	-		ABZR87_RS13475	0.75	+1.6
2,857,569	-		ABZR87_RS13475	0.75	-1.4
2,857,569	-		ABZR87_RS13475	0.75	-0.6
2,857,835	+		ABZR87_RS13475	0.86	-0.7
2,857,835	+		ABZR87_RS13475	0.86	-1.4
2,857,836	-		ABZR87_RS13475	0.86	+0.0
2,857,836	-		ABZR87_RS13475	0.86	+0.0
2,857,836	-		ABZR87_RS13475	0.86	-1.2
2,857,849	-		ABZR87_RS13475	0.86	-1.5
2,858,053	+				-1.3
2,858,086	+				+0.6
2,858,086	+				-1.0
2,858,087	-				-0.4
2,858,087	-				-0.4
2,858,103	+				-2.4
2,858,103	+				-0.9
2,858,103	+				-0.4
2,858,104	-				-2.7
2,858,104	-				+0.6
2,858,104	-				-0.2
2,858,104	-				-0.7
2,858,104	-				-1.0
2,858,104	-				-1.6
2,858,104	-				-1.2
2,858,104	-				-1.7
2,858,159	-				-0.4
2,858,193	-				-1.9
2,858,204	-				-0.4
2,858,210	+				-0.9
2,858,210	+				+0.6
2,858,210	+				-0.8
2,858,210	+				+0.4
2,858,210	+				-0.3
2,858,210	+				-0.1
2,858,211	-				-1.6
2,858,211	-				-0.4
2,858,217	+				-0.4
2,858,217	+				-0.7
2,858,218	-				+1.6
2,858,218	-				-1.2
2,858,343	+		ABZR87_RS13480	0.17	+0.6
2,858,928	+				-0.4
2,858,928	+				+0.1
2,858,929	-				-0.6
2,858,929	-				+0.1
2,858,929	-				-0.2
2,858,930	+				+0.3