Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10565

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
2,233,430	+		ABZR87_RS10555	0.59	+2.6
2,233,431	-		ABZR87_RS10555	0.59	+0.2
2,233,431	-		ABZR87_RS10555	0.59	+1.3
2,233,511	+		ABZR87_RS10555	0.69	+0.4
2,233,511	+		ABZR87_RS10555	0.69	+0.2
2,233,612	+		ABZR87_RS10555	0.82	+0.6
2,233,612	+		ABZR87_RS10555	0.82	+1.0
2,233,612	+		ABZR87_RS10555	0.82	+0.0
2,233,612	+		ABZR87_RS10555	0.82	+0.1
2,233,612	+		ABZR87_RS10555	0.82	-0.3
2,233,613	-		ABZR87_RS10555	0.82	+0.1
2,233,613	-		ABZR87_RS10555	0.82	+0.7
2,233,613	-		ABZR87_RS10555	0.82	-1.4
2,233,613	-		ABZR87_RS10555	0.82	-0.5
2,233,613	-		ABZR87_RS10555	0.82	+0.5
2,233,783	-				+0.3
2,233,783	-				+0.2
2,233,844	+				+0.5
2,233,907	+				+1.0
2,233,908	-				+1.6
2,233,914	+				-1.0
2,233,915	-				+1.2
2,234,161	+				+2.1
2,234,202	+				+1.2
2,234,206	+				+0.2
2,234,216	+				+1.1
2,234,217	-				+0.0
2,234,227	+				+2.5
2,234,228	-				+1.0
2,234,230	+				+2.0
2,234,230	+				+2.1
2,234,231	-				+1.6
2,234,242	+				+2.1
2,234,242	+				+1.1
2,234,242	+				+2.5
2,234,242	+				+1.4
2,234,242	+				+2.2
2,234,243	-				+0.5
2,234,243	-				+0.9
2,234,286	+				+0.8
2,234,286	+				+1.3
2,234,287	-				-0.4
2,234,287	-				+1.2
2,234,287	-				+0.7
2,234,298	-				+3.0
2,234,299	+				+1.0
2,234,299	+				+1.0
2,234,299	+				+1.7
2,234,300	-				+0.2
2,234,300	-				+1.1
2,234,300	-				+0.7
2,234,309	+				+1.4
2,234,309	+				+0.5
2,234,313	+				+2.2
2,234,313	+				+1.3
2,234,314	-				+0.8
2,234,322	+				+1.2
2,234,322	+				+1.4
2,234,322	+				+1.1
2,234,322	+				+1.1
2,234,322	+				+0.9
2,234,347	-				-0.4
2,234,347	-				+1.0
2,234,366	-				+0.2
2,234,366	-				+0.2
2,234,590	+		ABZR87_RS10565	0.16	-1.0
2,234,590	+		ABZR87_RS10565	0.16	-1.1
2,234,591	-		ABZR87_RS10565	0.17	-0.6
2,234,591	-		ABZR87_RS10565	0.17	-0.7
2,234,591	-		ABZR87_RS10565	0.17	-0.7
2,234,710	+		ABZR87_RS10565	0.26	+1.0
2,234,941	+		ABZR87_RS10565	0.45	-2.7
2,234,941	+		ABZR87_RS10565	0.45	-1.6
2,234,941	+		ABZR87_RS10565	0.45	+0.6
2,234,941	+		ABZR87_RS10565	0.45	-1.3
2,234,942	-		ABZR87_RS10565	0.45	+0.0
2,234,980	+		ABZR87_RS10565	0.48	+0.0
2,234,995	+		ABZR87_RS10565	0.49	-0.6
2,234,995	+		ABZR87_RS10565	0.49	-0.6
2,235,145	+		ABZR87_RS10565	0.62	-1.6
2,235,145	+		ABZR87_RS10565	0.62	-1.2
2,235,145	+		ABZR87_RS10565	0.62	-0.7
2,235,418	-		ABZR87_RS10565	0.84	-0.3
2,235,601	-				-0.4
2,235,646	+				+0.8
2,235,647	-				-0.1
2,235,665	+				-0.2
2,235,665	+				+0.2
2,235,666	-				-1.9
2,235,722	+		ABZR87_RS10570	0.18	-0.3
2,235,722	+		ABZR87_RS10570	0.18	+0.1
2,235,722	+		ABZR87_RS10570	0.18	-1.1
2,235,723	-		ABZR87_RS10570	0.18	+0.4
2,235,723	-		ABZR87_RS10570	0.18	-0.6
2,235,723	-		ABZR87_RS10570	0.18	+0.7
2,235,723	-		ABZR87_RS10570	0.18	+1.2
2,235,723	-		ABZR87_RS10570	0.18	+0.1
2,235,723	-		ABZR87_RS10570	0.18	+0.2
2,235,723	-		ABZR87_RS10570	0.18	-0.3
2,235,723	-		ABZR87_RS10570	0.18	-0.1
2,235,737	+		ABZR87_RS10570	0.20	+0.1
2,235,738	-		ABZR87_RS10570	0.21	+0.4
2,235,792	-		ABZR87_RS10570	0.31	+0.7
2,235,837	-		ABZR87_RS10570	0.39	+1.1
2,235,837	-		ABZR87_RS10570	0.39	+0.4
2,235,951	-		ABZR87_RS10570	0.61	+0.1
2,236,167	-				+0.1
2,236,340	+		ABZR87_RS10575	0.13	+0.1
2,236,340	+		ABZR87_RS10575	0.13	+0.4
2,236,340	+		ABZR87_RS10575	0.13	+0.7
2,236,341	-		ABZR87_RS10575	0.13	-1.1
2,236,341	-		ABZR87_RS10575	0.13	+0.2
2,236,341	-		ABZR87_RS10575	0.13	+0.5
2,236,341	-		ABZR87_RS10575	0.13	+0.1
2,236,452	-		ABZR87_RS10575	0.23	-0.2
2,236,493	+		ABZR87_RS10575	0.27	-0.1
2,236,494	-		ABZR87_RS10575	0.27	-0.6
2,236,494	-		ABZR87_RS10575	0.27	+0.2
2,236,519	+		ABZR87_RS10575	0.29	-0.4