Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10315

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
2,184,511	-				+0.6
2,184,511	-				-0.4
2,184,511	-				-0.6
2,184,592	+				+0.5
2,184,633	+				+0.1
2,184,994	+		ABZR87_RS10310	0.48	+0.8
2,184,994	+		ABZR87_RS10310	0.48	+0.0
2,184,995	-		ABZR87_RS10310	0.49	+0.4
2,185,192	+		ABZR87_RS10310	0.75	-0.6
2,185,192	+		ABZR87_RS10310	0.75	-1.4
2,185,214	-		ABZR87_RS10310	0.78	+0.7
2,185,214	-		ABZR87_RS10310	0.78	+1.6
2,185,438	+				-2.7
2,185,439	-				+0.0
2,185,440	+				-0.0
2,185,617	+		ABZR87_RS10315	0.11	-1.8
2,185,618	-		ABZR87_RS10315	0.11	+0.3
2,185,618	-		ABZR87_RS10315	0.11	-1.4
2,185,647	+		ABZR87_RS10315	0.13	-0.7
2,185,738	+		ABZR87_RS10315	0.20	-1.3
2,185,738	+		ABZR87_RS10315	0.20	+0.0
2,185,739	-		ABZR87_RS10315	0.20	+2.2
2,185,739	-		ABZR87_RS10315	0.20	+0.0
2,185,739	-		ABZR87_RS10315	0.20	-0.6
2,185,985	+		ABZR87_RS10315	0.38	-0.2
2,185,986	-		ABZR87_RS10315	0.38	-0.0
2,185,990	+		ABZR87_RS10315	0.38	-0.5
2,185,990	+		ABZR87_RS10315	0.38	-0.3
2,186,095	+		ABZR87_RS10315	0.46	-0.4
2,186,096	-		ABZR87_RS10315	0.46	-0.3
2,186,096	-		ABZR87_RS10315	0.46	-1.2
2,186,599	-		ABZR87_RS10315	0.82	+0.6
2,186,737	+				+0.9
2,186,901	+				+0.0
2,186,902	-				-0.8
2,186,902	-				+0.6
2,187,006	+				-1.6
2,187,006	+				+0.6
2,187,006	+				+0.6
2,187,006	+				-0.7
2,187,017	+				-0.9
2,187,079	-		ABZR87_RS10320	0.11	+0.6
2,187,079	-		ABZR87_RS10320	0.11	+0.5
2,187,084	+		ABZR87_RS10320	0.11	+2.6
2,187,085	-		ABZR87_RS10320	0.11	-0.4
2,187,111	+		ABZR87_RS10320	0.13	-0.1
2,187,112	-		ABZR87_RS10320	0.13	+0.1
2,187,421	-		ABZR87_RS10320	0.37	+0.1
2,187,421	-		ABZR87_RS10320	0.37	-0.3
2,187,492	+		ABZR87_RS10320	0.43	+0.3
2,187,493	-		ABZR87_RS10320	0.43	-0.1
2,187,493	-		ABZR87_RS10320	0.43	-0.0
2,187,493	-		ABZR87_RS10320	0.43	-0.5
2,187,693	+		ABZR87_RS10320	0.58	-1.5
2,187,694	-		ABZR87_RS10320	0.58	+0.2
2,187,694	-		ABZR87_RS10320	0.58	+0.6
2,187,789	+		ABZR87_RS10320	0.66	-1.0