Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10030

Experiment: Ra3_0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS10025 and ABZR87_RS10030 are separated by 24 nucleotidesABZR87_RS10030 and ABZR87_RS10035 are separated by 25 nucleotides ABZR87_RS10025: ABZR87_RS10025 - lysine--tRNA ligase, at 2,128,260 to 2,129,804 _RS10025 ABZR87_RS10030: ABZR87_RS10030 - SDR family oxidoreductase, at 2,129,829 to 2,130,569 _RS10030 ABZR87_RS10035: ABZR87_RS10035 - peptide chain release factor 2, at 2,130,595 to 2,131,699 _RS10035 Position (kb) 2129 2130 2131Strain fitness (log2 ratio) -1 0 1at 2129.888 kb on - strandat 2130.107 kb on - strand, within ABZR87_RS10030at 2130.107 kb on - strand, within ABZR87_RS10030

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Per-strain Table

Position Strand Gene LocusTag Fraction Ra3_0.1
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2,129,888 - -0.4
2,130,107 - ABZR87_RS10030 0.38 +0.2
2,130,107 - ABZR87_RS10030 0.38 +0.4

Or see this region's nucleotide sequence