Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08660

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,839,524	+				-1.4
1,839,524	+				+0.4
1,839,532	+				-0.3
1,839,532	+				-0.5
1,839,533	-				-0.4
1,839,596	+				-1.8
1,839,596	+				+0.9
1,839,597	-				+1.6
1,839,597	-				+0.1
1,839,597	-				+3.2
1,839,612	-				+0.1
1,839,651	-				+1.6
1,839,702	+		ABZR87_RS08655	0.12	+0.6
1,839,702	+		ABZR87_RS08655	0.12	+0.1
1,839,703	-		ABZR87_RS08655	0.12	+1.6
1,839,703	-		ABZR87_RS08655	0.12	+1.6
1,839,703	-		ABZR87_RS08655	0.12	+0.1
1,839,703	-		ABZR87_RS08655	0.12	+0.3
1,839,703	-		ABZR87_RS08655	0.12	+2.2
1,839,703	-		ABZR87_RS08655	0.12	+2.2
1,839,703	-		ABZR87_RS08655	0.12	-0.7
1,839,706	-		ABZR87_RS08655	0.12	+1.6
1,839,736	+		ABZR87_RS08655	0.16	+1.6
1,839,743	+		ABZR87_RS08655	0.17	+0.1
1,839,744	-		ABZR87_RS08655	0.17	+0.8
1,839,759	-		ABZR87_RS08655	0.19	-0.5
1,839,771	-		ABZR87_RS08655	0.20	-0.9
1,839,816	-		ABZR87_RS08655	0.25	+1.1
1,839,828	+		ABZR87_RS08655	0.26	+3.6
1,839,829	-		ABZR87_RS08655	0.27	+3.0
1,839,829	-		ABZR87_RS08655	0.27	+2.1
1,839,829	-		ABZR87_RS08655	0.27	+0.8
1,839,872	+		ABZR87_RS08655	0.32	+0.9
1,839,926	+		ABZR87_RS08655	0.38	-1.8
1,840,002	+		ABZR87_RS08655	0.46	-0.7
1,840,002	+		ABZR87_RS08655	0.46	+0.6
1,840,068	-		ABZR87_RS08655	0.54	-0.9
1,840,068	-		ABZR87_RS08655	0.54	-0.4
1,840,120	-		ABZR87_RS08655	0.60	-0.9
1,840,380	-		ABZR87_RS08655	0.90	+1.6
1,840,382	+				+0.6
1,840,431	+				-0.9
1,840,504	+				-0.6
1,840,505	-				-0.9
1,840,505	-				-0.8
1,840,561	-		ABZR87_RS08660	0.16	-1.2
1,840,581	-		ABZR87_RS08660	0.20	-0.7
1,840,600	+		ABZR87_RS08660	0.23	+1.1
1,840,622	+		ABZR87_RS08660	0.27	-1.2
1,840,623	-		ABZR87_RS08660	0.27	-2.5
1,840,720	+		ABZR87_RS08660	0.45	-0.2
1,840,721	-		ABZR87_RS08660	0.45	-2.1
1,840,721	-		ABZR87_RS08660	0.45	-3.6
1,840,725	-		ABZR87_RS08660	0.46	-1.4
1,840,725	-		ABZR87_RS08660	0.46	-0.7
1,840,725	-		ABZR87_RS08660	0.46	+0.5
1,840,725	-		ABZR87_RS08660	0.46	-2.4
1,840,777	+		ABZR87_RS08660	0.55	+0.6
1,840,840	+		ABZR87_RS08660	0.67	-0.2
1,840,841	-		ABZR87_RS08660	0.67	-0.4
1,840,841	-		ABZR87_RS08660	0.67	-1.9
1,840,864	-		ABZR87_RS08660	0.71	+0.8
1,840,878	+		ABZR87_RS08660	0.74	-0.7
1,840,879	-		ABZR87_RS08660	0.74	-1.6
1,840,879	-		ABZR87_RS08660	0.74	-2.8
1,840,880	-		ABZR87_RS08660	0.74	-0.6
1,840,881	+		ABZR87_RS08660	0.74	+0.3
1,840,881	+		ABZR87_RS08660	0.74	+1.6
1,840,881	+		ABZR87_RS08660	0.74	+0.1
1,840,881	+		ABZR87_RS08660	0.74	+0.2
1,840,881	+		ABZR87_RS08660	0.74	-1.1
1,840,882	-		ABZR87_RS08660	0.74	-0.9
1,840,882	-		ABZR87_RS08660	0.74	-0.9
1,840,904	+		ABZR87_RS08660	0.79	-1.9
1,840,996	+				-0.5
1,840,997	-				-1.5
1,841,019	+				+0.8
1,841,019	+				-0.7
1,841,020	-				+1.6
1,841,044	+				+0.4
1,841,065	-				+1.6
1,841,065	-				+0.1
1,841,068	+				+2.4
1,841,168	+		ABZR87_RS08665	0.15	+1.6
1,841,168	+		ABZR87_RS08665	0.15	+1.6
1,841,169	-		ABZR87_RS08665	0.15	+2.6
1,841,234	+		ABZR87_RS08665	0.24	+1.2
1,841,234	+		ABZR87_RS08665	0.24	+3.0
1,841,235	-		ABZR87_RS08665	0.24	+1.6
1,841,235	-		ABZR87_RS08665	0.24	+2.9
1,841,255	+		ABZR87_RS08665	0.27	+0.6
1,841,255	+		ABZR87_RS08665	0.27	+2.6
1,841,256	-		ABZR87_RS08665	0.27	+1.6
1,841,256	-		ABZR87_RS08665	0.27	+0.8
1,841,256	-		ABZR87_RS08665	0.27	+0.1
1,841,256	-		ABZR87_RS08665	0.27	+2.0
1,841,265	+		ABZR87_RS08665	0.28	+2.3
1,841,265	+		ABZR87_RS08665	0.28	+3.0
1,841,266	-		ABZR87_RS08665	0.29	+2.6
1,841,266	-		ABZR87_RS08665	0.29	+1.2
1,841,266	-		ABZR87_RS08665	0.29	+2.1
1,841,266	-		ABZR87_RS08665	0.29	+2.6
1,841,266	-		ABZR87_RS08665	0.29	+2.1
1,841,266	-		ABZR87_RS08665	0.29	+2.2
1,841,285	-		ABZR87_RS08665	0.31	+2.1
1,841,285	-		ABZR87_RS08665	0.31	+2.1
1,841,285	-		ABZR87_RS08665	0.31	+2.0
1,841,285	-		ABZR87_RS08665	0.31	+1.6
1,841,292	+		ABZR87_RS08665	0.32	+0.7
1,841,389	-		ABZR87_RS08665	0.45	+2.7
1,841,445	+		ABZR87_RS08665	0.53	+2.6
1,841,446	-		ABZR87_RS08665	0.53	+1.9
1,841,617	-		ABZR87_RS08665	0.76	+3.1
1,841,660	+		ABZR87_RS08665	0.82	+3.6
1,841,693	+		ABZR87_RS08665	0.86	+3.2
1,841,705	-		ABZR87_RS08665	0.88	+3.0
1,841,705	-		ABZR87_RS08665	0.88	+3.2
1,841,755	-				+1.9
1,841,793	+				+1.7
1,841,793	+				+0.1
1,841,793	+				+1.6
1,841,793	+				+2.6
1,841,824	+				+2.5
1,841,825	-				+1.2
1,841,855	+				+0.9
1,841,856	-				+1.8
1,841,919	+		ABZR87_RS08670	0.12	+1.6
1,841,981	+		ABZR87_RS08670	0.18	+1.1
1,842,001	-		ABZR87_RS08670	0.20	+1.6