Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06140

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,308,449	-				-0.9
1,308,460	+				+0.2
1,308,460	+				+0.4
1,308,604	-				-0.9
1,308,861	+		ABZR87_RS06135	0.31	+0.4
1,308,861	+		ABZR87_RS06135	0.31	-0.9
1,308,861	+		ABZR87_RS06135	0.31	-0.5
1,308,861	+		ABZR87_RS06135	0.31	+0.3
1,308,862	-		ABZR87_RS06135	0.31	-0.1
1,308,862	-		ABZR87_RS06135	0.31	-0.1
1,308,862	-		ABZR87_RS06135	0.31	+0.9
1,308,862	-		ABZR87_RS06135	0.31	+0.4
1,309,167	+		ABZR87_RS06135	0.67	-1.2
1,309,168	-		ABZR87_RS06135	0.67	-0.4
1,309,168	-		ABZR87_RS06135	0.67	-0.4
1,309,168	-		ABZR87_RS06135	0.67	+0.7
1,309,168	-		ABZR87_RS06135	0.67	-0.5
1,309,230	+		ABZR87_RS06135	0.74	+0.6
1,309,326	+		ABZR87_RS06135	0.85	+0.0
1,309,327	-		ABZR87_RS06135	0.85	-1.2
1,309,327	-		ABZR87_RS06135	0.85	-0.5
1,309,450	-				-0.7
1,309,518	+		ABZR87_RS06140	0.13	+0.9
1,309,518	+		ABZR87_RS06140	0.13	+0.5
1,309,518	+		ABZR87_RS06140	0.13	-0.5
1,309,519	-		ABZR87_RS06140	0.13	+0.7
1,309,519	-		ABZR87_RS06140	0.13	-1.6
1,309,519	-		ABZR87_RS06140	0.13	+0.7
1,309,519	-		ABZR87_RS06140	0.13	-0.6
1,309,519	-		ABZR87_RS06140	0.13	-0.3
1,309,522	+		ABZR87_RS06140	0.14	-0.1
1,309,522	+		ABZR87_RS06140	0.14	-0.7
1,309,522	+		ABZR87_RS06140	0.14	-0.5
1,309,523	-		ABZR87_RS06140	0.14	-0.8
1,310,063	+		ABZR87_RS06145	0.13	-1.4
1,310,063	+		ABZR87_RS06145	0.13	-0.2
1,310,064	-		ABZR87_RS06145	0.13	-0.7
1,310,205	-		ABZR87_RS06145	0.37	+0.1
1,310,205	-		ABZR87_RS06145	0.37	+0.3
1,310,205	-		ABZR87_RS06145	0.37	-1.0
1,310,288	+		ABZR87_RS06145	0.51	+0.6
1,310,289	-		ABZR87_RS06145	0.52	-0.5
1,310,289	-		ABZR87_RS06145	0.52	+0.7
1,310,554	-				+0.4
1,310,554	-				+0.2
1,310,554	-				-1.1
1,310,583	+				-0.5
1,310,584	-				+0.4
1,310,601	-				-0.0
1,310,601	-				+0.6
1,310,631	+				+0.3
1,310,631	+				-0.3
1,310,631	+				+1.7
1,310,632	-				-0.1
1,310,646	+				+0.3
1,310,646	+				-0.1
1,310,647	-				-0.0
1,310,688	+				-0.1
1,310,688	+				-0.4
1,310,688	+				-0.1
1,310,689	-				-0.7
1,310,689	-				+0.1
1,310,884	+		ABZR87_RS06150	0.13	-0.3
1,310,885	-		ABZR87_RS06150	0.13	-0.8
1,310,885	-		ABZR87_RS06150	0.13	-0.8
1,310,891	+		ABZR87_RS06150	0.13	+1.0
1,310,891	+		ABZR87_RS06150	0.13	-0.1
1,310,891	+		ABZR87_RS06150	0.13	-1.4
1,310,891	+		ABZR87_RS06150	0.13	+0.9
1,310,891	+		ABZR87_RS06150	0.13	+0.9
1,310,892	-		ABZR87_RS06150	0.13	-0.3
1,310,892	-		ABZR87_RS06150	0.13	-0.5
1,310,892	-		ABZR87_RS06150	0.13	+0.1
1,310,909	+		ABZR87_RS06150	0.15	+0.2
1,310,909	+		ABZR87_RS06150	0.15	+0.7
1,310,909	+		ABZR87_RS06150	0.15	+0.2
1,310,909	+		ABZR87_RS06150	0.15	+0.3
1,310,909	+		ABZR87_RS06150	0.15	-0.9
1,310,909	+		ABZR87_RS06150	0.15	-1.0
1,310,910	-		ABZR87_RS06150	0.15	+0.1
1,310,910	-		ABZR87_RS06150	0.15	-0.6
1,310,910	-		ABZR87_RS06150	0.15	-0.6
1,310,910	-		ABZR87_RS06150	0.15	+0.4
1,310,910	-		ABZR87_RS06150	0.15	+0.0
1,310,986	+		ABZR87_RS06150	0.23	+1.1
1,310,986	+		ABZR87_RS06150	0.23	+0.4