Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS04980

Experiment: Ra3_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_0.1
1,044,408	-				-0.2
1,044,410	+				+2.1
1,044,410	+				-1.3
1,044,410	+				+1.5
1,044,410	+				+0.8
1,044,410	+				-0.1
1,044,410	+				+0.3
1,044,411	-				-0.4
1,044,411	-				-0.6
1,044,461	+				+0.4
1,044,461	+				-0.4
1,044,461	+				+0.3
1,044,462	-				-0.1
1,044,462	-				-1.7
1,044,532	+				-0.9
1,044,532	+				-0.2
1,044,532	+				-0.0
1,044,533	-				+0.1
1,044,533	-				-1.7
1,044,533	-				-0.1
1,044,533	-				+0.2
1,044,533	-				-0.2
1,044,533	-				-0.4
1,044,696	+		ABZR87_RS04975	0.15	+0.2
1,044,696	+		ABZR87_RS04975	0.15	+0.5
1,044,696	+		ABZR87_RS04975	0.15	-0.2
1,044,697	-		ABZR87_RS04975	0.15	+0.0
1,044,697	-		ABZR87_RS04975	0.15	+0.4
1,044,697	-		ABZR87_RS04975	0.15	-0.4
1,044,697	-		ABZR87_RS04975	0.15	+0.6
1,045,245	-				+1.6
1,045,245	-				-0.1
1,045,275	+				-1.4
1,045,304	+				-0.7
1,045,304	+				-1.5
1,045,304	+				-0.4
1,045,304	+				+0.4
1,045,304	+				-0.4
1,045,305	-				+0.1
1,045,305	-				+0.9
1,045,360	+				+0.6
1,045,360	+				-0.5
1,045,360	+				-1.2
1,045,361	-				-0.3
1,045,361	-				+0.3
1,045,361	-				+0.4
1,045,365	+				-1.2
1,045,365	+				-0.5
1,045,365	+				-0.3
1,045,365	+				-1.2
1,045,365	+				-0.8
1,045,365	+				-0.8
1,045,366	-				+0.9
1,045,366	-				+0.9
1,045,366	-				+0.8
1,045,366	-				+0.2
1,045,366	-				+1.1
1,045,378	+				-0.2
1,045,379	-				+3.4
1,045,379	-				+1.4
1,045,436	+				-0.3
1,045,437	-				+2.2
1,045,598	+		ABZR87_RS04980	0.18	+2.3
1,045,598	+		ABZR87_RS04980	0.18	+1.3
1,045,598	+		ABZR87_RS04980	0.18	+2.4
1,045,598	+		ABZR87_RS04980	0.18	+2.4
1,045,598	+		ABZR87_RS04980	0.18	+2.4
1,045,598	+		ABZR87_RS04980	0.18	+2.5
1,045,598	+		ABZR87_RS04980	0.18	+2.5
1,045,598	+		ABZR87_RS04980	0.18	+0.9
1,045,643	+		ABZR87_RS04980	0.21	+2.3
1,045,643	+		ABZR87_RS04980	0.21	+1.9
1,045,643	+		ABZR87_RS04980	0.21	+2.1
1,045,643	+		ABZR87_RS04980	0.21	+2.4
1,045,643	+		ABZR87_RS04980	0.21	+2.8
1,045,643	+		ABZR87_RS04980	0.21	+2.2
1,045,644	-		ABZR87_RS04980	0.22	+2.8
1,045,644	-		ABZR87_RS04980	0.22	+2.2
1,045,644	-		ABZR87_RS04980	0.22	+2.9
1,045,658	+		ABZR87_RS04980	0.23	+2.1
1,045,718	+		ABZR87_RS04980	0.28	+2.5
1,045,718	+		ABZR87_RS04980	0.28	+2.2
1,045,718	+		ABZR87_RS04980	0.28	+2.4
1,045,718	+		ABZR87_RS04980	0.28	+1.9
1,045,719	-		ABZR87_RS04980	0.28	+2.7
1,045,721	-		ABZR87_RS04980	0.28	+2.2
1,045,736	+		ABZR87_RS04980	0.29	+2.7
1,045,736	+		ABZR87_RS04980	0.29	+2.6
1,045,737	-		ABZR87_RS04980	0.29	+3.6
1,045,820	-		ABZR87_RS04980	0.36	+2.7
1,045,965	-		ABZR87_RS04980	0.49	+2.1
1,045,965	-		ABZR87_RS04980	0.49	+2.7
1,045,965	-		ABZR87_RS04980	0.49	+2.3
1,045,988	+		ABZR87_RS04980	0.51	+2.4
1,045,988	+		ABZR87_RS04980	0.51	+2.3
1,046,045	+		ABZR87_RS04980	0.55	+2.1
1,046,046	-		ABZR87_RS04980	0.55	+2.0
1,046,046	-		ABZR87_RS04980	0.55	+2.5
1,046,243	+		ABZR87_RS04980	0.72	+2.4
1,046,244	-		ABZR87_RS04980	0.72	+3.1
1,046,245	+		ABZR87_RS04980	0.72	+2.1
1,046,245	+		ABZR87_RS04980	0.72	+2.4
1,046,245	+		ABZR87_RS04980	0.72	+1.5
1,046,245	+		ABZR87_RS04980	0.72	+1.9
1,046,246	-		ABZR87_RS04980	0.72	+2.6
1,046,498	+				+2.0
1,046,498	+				+2.2
1,046,498	+				+2.5
1,046,499	-				+2.9
1,046,499	-				+1.7
1,046,499	-				+2.3
1,046,499	-				+3.0
1,046,499	-				+2.0
1,046,578	+				+0.6
1,046,578	+				-0.0
1,046,578	+				+0.6
1,046,578	+				+0.5
1,046,578	+				+0.6
1,046,578	+				-1.4
1,046,578	+				-0.8
1,046,578	+				-0.2
1,046,578	+				-0.1
1,046,579	-				-0.2
1,046,579	-				+0.4
1,046,579	-				+0.2
1,046,786	+		ABZR87_RS04985	0.15	-0.2
1,046,787	+		ABZR87_RS04985	0.15	+0.1
1,046,787	+		ABZR87_RS04985	0.15	-0.3
1,046,787	+		ABZR87_RS04985	0.15	-0.1
1,046,788	-		ABZR87_RS04985	0.16	-0.1
1,046,979	+		ABZR87_RS04985	0.31	+0.9
1,046,979	+		ABZR87_RS04985	0.31	-0.1
1,046,979	+		ABZR87_RS04985	0.31	-0.0
1,046,979	+		ABZR87_RS04985	0.31	-0.9
1,046,980	-		ABZR87_RS04985	0.31	+0.3
1,046,980	-		ABZR87_RS04985	0.31	-0.9
1,046,980	-		ABZR87_RS04985	0.31	+0.1
1,046,980	-		ABZR87_RS04985	0.31	+0.4
1,046,980	-		ABZR87_RS04985	0.31	-0.5
1,046,980	-		ABZR87_RS04985	0.31	+0.8
1,046,980	-		ABZR87_RS04985	0.31	+0.8
1,047,190	+		ABZR87_RS04985	0.49	-0.2
1,047,190	+		ABZR87_RS04985	0.49	+0.9
1,047,190	+		ABZR87_RS04985	0.49	-0.7
1,047,190	+		ABZR87_RS04985	0.49	-0.4
1,047,190	+		ABZR87_RS04985	0.49	+0.0
1,047,190	+		ABZR87_RS04985	0.49	-0.7
1,047,190	+		ABZR87_RS04985	0.49	+0.1
1,047,190	+		ABZR87_RS04985	0.49	-0.1
1,047,190	+		ABZR87_RS04985	0.49	+0.0
1,047,191	-		ABZR87_RS04985	0.49	+0.3
1,047,191	-		ABZR87_RS04985	0.49	+0.1
1,047,191	-		ABZR87_RS04985	0.49	-0.7
1,047,191	-		ABZR87_RS04985	0.49	+0.3
1,047,191	-		ABZR87_RS04985	0.49	+1.2
1,047,191	-		ABZR87_RS04985	0.49	-0.6
1,047,191	-		ABZR87_RS04985	0.49	-0.4
1,047,194	+		ABZR87_RS04985	0.49	+0.8
1,047,194	+		ABZR87_RS04985	0.49	-0.3
1,047,194	+		ABZR87_RS04985	0.49	+0.1
1,047,207	-		ABZR87_RS04985	0.50	-0.4
1,047,276	+		ABZR87_RS04985	0.56	+0.4