Experiment: MoYLS4 with Ammonium Persulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2191 and DVU2192 overlap by 8 nucleotides DVU2192 and DVU2193 are separated by 26 nucleotides DVU2193 and DVU2194 are separated by 46 nucleotides DVU2194 and DVU2195 overlap by 8 nucleotides DVU2195 and DVU2196 are separated by 49 nucleotides DVU2196 and DVU2197 are separated by 0 nucleotides
DVU2191: DVU2191 - hypothetical protein (TIGR), at 2,290,097 to 2,290,453
DVU2191
DVU2192: DVU2192 - hypothetical protein (TIGR), at 2,290,446 to 2,290,601
DVU2192
DVU2193: DVU2193 - hypothetical protein (TIGR), at 2,290,628 to 2,291,182
DVU2193
DVU2194: DVU2194 - hypothetical protein (TIGR), at 2,291,229 to 2,291,918
DVU2194
DVU2195: DVU2195 - hypothetical protein (TIGR), at 2,291,911 to 2,292,168
DVU2195
DVU2196: DVU2196 - hypothetical protein (TIGR), at 2,292,218 to 2,292,763
DVU2196
DVU2197: DVU2197 - site-specific recombinase, phage integrase family (TIGR), at 2,292,764 to 2,293,693
DVU2197
Position (kb)
2291
2292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2290.276 kb on - strand, within DVU2191 at 2290.282 kb on - strand, within DVU2191 at 2290.282 kb on - strand, within DVU2191 at 2290.437 kb on + strand at 2290.511 kb on + strand, within DVU2192 at 2290.513 kb on + strand, within DVU2192 at 2290.519 kb on + strand, within DVU2192 at 2290.527 kb on - strand, within DVU2192 at 2290.596 kb on + strand at 2290.618 kb on - strand at 2290.643 kb on + strand at 2290.666 kb on - strand at 2290.688 kb on + strand, within DVU2193 at 2290.688 kb on + strand, within DVU2193 at 2290.688 kb on + strand, within DVU2193 at 2290.688 kb on + strand, within DVU2193 at 2290.720 kb on + strand, within DVU2193 at 2290.729 kb on - strand, within DVU2193 at 2290.733 kb on + strand, within DVU2193 at 2290.733 kb on + strand, within DVU2193 at 2290.741 kb on - strand, within DVU2193 at 2290.741 kb on - strand, within DVU2193 at 2290.779 kb on + strand, within DVU2193 at 2290.784 kb on + strand, within DVU2193 at 2290.787 kb on - strand, within DVU2193 at 2290.811 kb on + strand, within DVU2193 at 2290.832 kb on - strand, within DVU2193 at 2290.832 kb on - strand, within DVU2193 at 2290.843 kb on + strand, within DVU2193 at 2290.843 kb on + strand, within DVU2193 at 2290.843 kb on + strand, within DVU2193 at 2290.962 kb on - strand, within DVU2193 at 2290.994 kb on + strand, within DVU2193 at 2291.081 kb on + strand, within DVU2193 at 2291.267 kb on + strand at 2291.311 kb on - strand, within DVU2194 at 2291.321 kb on - strand, within DVU2194 at 2291.328 kb on - strand, within DVU2194 at 2291.338 kb on - strand, within DVU2194 at 2291.342 kb on + strand, within DVU2194 at 2291.342 kb on + strand, within DVU2194 at 2291.403 kb on - strand, within DVU2194 at 2291.475 kb on + strand, within DVU2194 at 2291.539 kb on - strand, within DVU2194 at 2291.754 kb on + strand, within DVU2194 at 2291.764 kb on - strand, within DVU2194 at 2291.809 kb on + strand, within DVU2194 at 2291.824 kb on + strand, within DVU2194 at 2291.958 kb on + strand, within DVU2195 at 2291.970 kb on + strand, within DVU2195 at 2291.987 kb on - strand, within DVU2195 at 2292.004 kb on + strand, within DVU2195 at 2292.012 kb on - strand, within DVU2195 at 2292.031 kb on - strand, within DVU2195 at 2292.049 kb on + strand, within DVU2195 at 2292.049 kb on + strand, within DVU2195 at 2292.049 kb on + strand, within DVU2195 at 2292.049 kb on + strand, within DVU2195 at 2292.050 kb on - strand, within DVU2195 at 2292.057 kb on - strand, within DVU2195 at 2292.057 kb on - strand, within DVU2195 at 2292.057 kb on - strand, within DVU2195 at 2292.057 kb on - strand, within DVU2195 at 2292.057 kb on - strand, within DVU2195 at 2292.081 kb on + strand, within DVU2195 at 2292.096 kb on - strand, within DVU2195 at 2292.128 kb on - strand, within DVU2195 at 2292.234 kb on + strand at 2292.317 kb on + strand, within DVU2196 at 2292.317 kb on + strand, within DVU2196 at 2292.362 kb on - strand, within DVU2196 at 2292.371 kb on + strand, within DVU2196 at 2292.387 kb on + strand, within DVU2196 at 2292.413 kb on + strand, within DVU2196 at 2292.418 kb on + strand, within DVU2196 at 2292.419 kb on + strand, within DVU2196 at 2292.502 kb on + strand, within DVU2196 at 2292.587 kb on - strand, within DVU2196 at 2292.642 kb on - strand, within DVU2196 at 2292.699 kb on - strand, within DVU2196 at 2292.699 kb on - strand, within DVU2196 at 2292.708 kb on - strand, within DVU2196 at 2292.724 kb on + strand at 2292.724 kb on + strand at 2292.792 kb on + strand at 2292.870 kb on + strand, within DVU2197 at 2292.870 kb on + strand, within DVU2197
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ammonium Persulfate 1mM remove 2,290,276 - DVU2191 0.50 +0.8 2,290,282 - DVU2191 0.52 -1.1 2,290,282 - DVU2191 0.52 +0.2 2,290,437 + -0.1 2,290,511 + DVU2192 0.42 -0.1 2,290,513 + DVU2192 0.43 -0.5 2,290,519 + DVU2192 0.47 +0.3 2,290,527 - DVU2192 0.52 +0.4 2,290,596 + -0.3 2,290,618 - -0.4 2,290,643 + +0.7 2,290,666 - -0.0 2,290,688 + DVU2193 0.11 -0.0 2,290,688 + DVU2193 0.11 +0.7 2,290,688 + DVU2193 0.11 +0.1 2,290,688 + DVU2193 0.11 +0.1 2,290,720 + DVU2193 0.17 -0.1 2,290,729 - DVU2193 0.18 +0.0 2,290,733 + DVU2193 0.19 -0.5 2,290,733 + DVU2193 0.19 -1.0 2,290,741 - DVU2193 0.20 -0.4 2,290,741 - DVU2193 0.20 +0.2 2,290,779 + DVU2193 0.27 +0.3 2,290,784 + DVU2193 0.28 -1.8 2,290,787 - DVU2193 0.29 -1.8 2,290,811 + DVU2193 0.33 +1.2 2,290,832 - DVU2193 0.37 -0.1 2,290,832 - DVU2193 0.37 +0.0 2,290,843 + DVU2193 0.39 +0.3 2,290,843 + DVU2193 0.39 -1.9 2,290,843 + DVU2193 0.39 -0.3 2,290,962 - DVU2193 0.60 +0.0 2,290,994 + DVU2193 0.66 -0.4 2,291,081 + DVU2193 0.82 +0.1 2,291,267 + -0.0 2,291,311 - DVU2194 0.12 -0.8 2,291,321 - DVU2194 0.13 -0.2 2,291,328 - DVU2194 0.14 +1.7 2,291,338 - DVU2194 0.16 -1.1 2,291,342 + DVU2194 0.16 -0.6 2,291,342 + DVU2194 0.16 -0.5 2,291,403 - DVU2194 0.25 -0.1 2,291,475 + DVU2194 0.36 -0.3 2,291,539 - DVU2194 0.45 -0.2 2,291,754 + DVU2194 0.76 -0.2 2,291,764 - DVU2194 0.78 -0.7 2,291,809 + DVU2194 0.84 -0.6 2,291,824 + DVU2194 0.86 +1.2 2,291,958 + DVU2195 0.18 +0.1 2,291,970 + DVU2195 0.23 +1.6 2,291,987 - DVU2195 0.29 -0.4 2,292,004 + DVU2195 0.36 +0.5 2,292,012 - DVU2195 0.39 -0.1 2,292,031 - DVU2195 0.47 +2.2 2,292,049 + DVU2195 0.53 +0.5 2,292,049 + DVU2195 0.53 +1.2 2,292,049 + DVU2195 0.53 -0.2 2,292,049 + DVU2195 0.53 +0.5 2,292,050 - DVU2195 0.54 -0.2 2,292,057 - DVU2195 0.57 -0.6 2,292,057 - DVU2195 0.57 -0.5 2,292,057 - DVU2195 0.57 -0.0 2,292,057 - DVU2195 0.57 -0.1 2,292,057 - DVU2195 0.57 -1.4 2,292,081 + DVU2195 0.66 -0.5 2,292,096 - DVU2195 0.72 -2.2 2,292,128 - DVU2195 0.84 -0.1 2,292,234 + -2.5 2,292,317 + DVU2196 0.18 -0.3 2,292,317 + DVU2196 0.18 -0.6 2,292,362 - DVU2196 0.26 +0.1 2,292,371 + DVU2196 0.28 +0.0 2,292,387 + DVU2196 0.31 -0.3 2,292,413 + DVU2196 0.36 +1.7 2,292,418 + DVU2196 0.37 -0.0 2,292,419 + DVU2196 0.37 +0.0 2,292,502 + DVU2196 0.52 +2.2 2,292,587 - DVU2196 0.68 -0.1 2,292,642 - DVU2196 0.78 -0.3 2,292,699 - DVU2196 0.88 +1.2 2,292,699 - DVU2196 0.88 -0.4 2,292,708 - DVU2196 0.90 +0.2 2,292,724 + -2.0 2,292,724 + -0.1 2,292,792 + +0.0 2,292,870 + DVU2197 0.11 +0.5 2,292,870 + DVU2197 0.11 -0.3
Or see this region's nucleotide sequence