Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22305

Experiment: Ra3_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_1
1,362,062	+		ABZR87_RS22295	0.58	-3.7
1,362,062	+		ABZR87_RS22295	0.58	-0.8
1,362,062	+		ABZR87_RS22295	0.58	-3.7
1,362,062	+		ABZR87_RS22295	0.58	-0.6
1,362,062	+		ABZR87_RS22295	0.58	-3.3
1,362,062	+		ABZR87_RS22295	0.58	-2.9
1,362,062	+		ABZR87_RS22295	0.58	-2.3
1,362,062	+		ABZR87_RS22295	0.58	-1.3
1,362,062	+		ABZR87_RS22295	0.58	-3.6
1,362,062	+		ABZR87_RS22295	0.58	-0.8
1,362,062	+		ABZR87_RS22295	0.58	-3.9
1,362,063	-		ABZR87_RS22295	0.58	-2.9
1,362,063	-		ABZR87_RS22295	0.58	-0.2
1,362,063	-		ABZR87_RS22295	0.58	-1.4
1,362,063	-		ABZR87_RS22295	0.58	+0.9
1,362,063	-		ABZR87_RS22295	0.58	-1.4
1,362,063	-		ABZR87_RS22295	0.58	-1.7
1,362,063	-		ABZR87_RS22295	0.58	-1.8
1,362,063	-		ABZR87_RS22295	0.58	-1.2
1,362,063	-		ABZR87_RS22295	0.58	-2.9
1,362,063	-		ABZR87_RS22295	0.58	-2.5
1,362,065	+		ABZR87_RS22295	0.58	-2.5
1,362,065	+		ABZR87_RS22295	0.58	-1.7
1,362,065	+		ABZR87_RS22295	0.58	-1.8
1,362,065	+		ABZR87_RS22295	0.58	-1.6
1,362,065	+		ABZR87_RS22295	0.58	-0.2
1,362,065	+		ABZR87_RS22295	0.58	-1.3
1,362,065	+		ABZR87_RS22295	0.58	+1.4
1,362,065	+		ABZR87_RS22295	0.58	-1.6
1,362,065	+		ABZR87_RS22295	0.58	-1.2
1,362,066	-		ABZR87_RS22295	0.58	-1.0
1,362,066	-		ABZR87_RS22295	0.58	+0.2
1,362,066	-		ABZR87_RS22295	0.58	-2.0
1,362,066	-		ABZR87_RS22295	0.58	-2.7
1,362,066	-		ABZR87_RS22295	0.58	-2.9
1,362,066	-		ABZR87_RS22295	0.58	-2.9
1,362,066	-		ABZR87_RS22295	0.58	-2.0
1,362,066	-		ABZR87_RS22295	0.58	-2.7
1,362,066	-		ABZR87_RS22295	0.58	-2.4
1,362,066	-		ABZR87_RS22295	0.58	-2.0
1,362,066	-		ABZR87_RS22295	0.58	-0.3
1,362,066	-		ABZR87_RS22295	0.58	-0.0
1,362,066	-		ABZR87_RS22295	0.58	-1.7
1,362,107	-		ABZR87_RS22295	0.63	-1.1
1,362,192	+		ABZR87_RS22295	0.72	-4.5
1,362,192	+		ABZR87_RS22295	0.72	-1.0
1,362,192	+		ABZR87_RS22295	0.72	-2.9
1,362,193	-		ABZR87_RS22295	0.73	-3.8
1,362,193	-		ABZR87_RS22295	0.73	-2.0
1,362,193	-		ABZR87_RS22295	0.73	-1.4
1,362,193	-		ABZR87_RS22295	0.73	-2.3
1,362,193	-		ABZR87_RS22295	0.73	-1.5
1,362,432	-				+1.0
1,362,432	-				+1.5
1,362,432	-				+1.0
1,362,464	+				+1.6
1,362,464	+				-0.6
1,362,483	+				-0.6
1,362,484	-				+0.3
1,362,484	-				-0.2
1,362,484	-				-1.3
1,362,493	+				+1.4
1,362,527	+				-2.7
1,362,527	+				+0.4
1,362,527	+				-1.2
1,362,527	+				+1.4
1,362,527	+				+0.9
1,362,527	+				+0.5
1,362,528	-				-0.8
1,362,528	-				-3.6
1,362,528	-				-0.8
1,362,528	-				-2.9
1,362,570	+				-3.8
1,362,570	+				-1.3
1,362,570	+				+0.5
1,362,570	+				-3.2
1,362,571	-				-0.5
1,362,571	-				-1.5
1,362,571	-				-3.1
1,362,571	-				+0.8
1,362,571	-				-1.4
1,362,582	+				-1.8
1,362,582	+				-2.2
1,362,583	-				-2.2
1,362,583	-				-2.9
1,362,583	-				-2.3
1,362,583	-				-0.8
1,362,583	-				-3.5
1,362,654	+		ABZR87_RS22300	0.31	-1.9
1,362,905	-				+0.0
1,362,905	-				-2.3
1,362,996	+				-1.0
1,362,996	+				+0.7
1,362,996	+				+0.8
1,362,996	+				+0.6
1,362,996	+				+0.4
1,362,996	+				-0.2
1,362,996	+				+0.6
1,362,996	+				-1.0
1,362,996	+				+0.4
1,362,996	+				-0.9
1,362,997	-				-0.4
1,362,997	-				-1.0
1,362,997	-				-0.2
1,363,235	+		ABZR87_RS22305	0.50	-1.2
1,363,235	+		ABZR87_RS22305	0.50	-2.0
1,363,235	+		ABZR87_RS22305	0.50	+1.4
1,363,235	+		ABZR87_RS22305	0.50	-1.8
1,363,235	+		ABZR87_RS22305	0.50	-0.7
1,363,236	-		ABZR87_RS22305	0.50	-0.6
1,363,236	-		ABZR87_RS22305	0.50	-2.7
1,363,236	-		ABZR87_RS22305	0.50	-1.5
1,363,236	-		ABZR87_RS22305	0.50	-0.3
1,363,236	-		ABZR87_RS22305	0.50	-2.7
1,363,407	-		ABZR87_RS22305	0.87	-2.0
1,363,407	-		ABZR87_RS22305	0.87	-0.8
1,363,463	+				-0.2
1,363,463	+				-1.1
1,363,463	+				-0.2
1,363,463	+				-2.6
1,363,463	+				-0.7
1,363,463	+				+0.6
1,363,464	-				+2.7
1,363,464	-				+0.2
1,363,464	-				+0.8
1,363,464	-				+0.5
1,363,464	-				-0.0
1,363,506	-				-0.8
1,363,506	-				+0.5
1,363,536	+				+0.8
1,363,536	+				-2.9
1,363,537	-				+0.4
1,363,537	-				+0.8
1,363,559	+				-2.2
1,363,559	+				-1.8
1,363,559	+				-0.2
1,363,559	+				-0.7
1,363,559	+				-0.1
1,363,559	+				-0.8
1,363,559	+				-1.1
1,363,559	+				-0.9
1,363,559	+				-0.4
1,363,559	+				+0.8
1,363,559	+				-0.2
1,363,559	+				-0.1
1,363,559	+				-0.4
1,363,560	-				+0.6
1,363,560	-				-0.2
1,363,560	-				+0.0
1,363,560	-				-0.9
1,363,560	-				+0.4
1,363,560	-				+0.2
1,363,560	-				-0.1
1,363,560	-				+0.3
1,363,560	-				+0.3
1,363,560	-				-1.2
1,363,560	-				-0.2
1,363,560	-				+0.7
1,363,560	-				+0.5
1,363,563	+				-0.1
1,363,563	+				-0.4
1,363,563	+				-1.6
1,363,563	+				-1.6
1,363,563	+				-2.2
1,363,563	+				+1.5
1,363,563	+				-2.2
1,363,563	+				-0.2
1,363,564	-				+0.5
1,363,564	-				+0.5
1,363,564	-				+0.1
1,363,564	-				+0.0
1,363,564	-				-0.6
1,363,564	-				+1.7
1,363,564	-				-0.2
1,363,564	-				-0.0
1,363,564	-				-0.2
1,363,564	-				+0.0
1,363,564	-				-0.9
1,363,564	-				+0.1
1,363,564	-				+1.1
1,363,564	-				-0.1
1,363,564	-				+0.9
1,363,566	-				+1.5
1,363,648	+				-1.2
1,363,648	+				-2.5
1,363,648	+				-0.1
1,363,648	+				+2.1
1,363,648	+				-1.2
1,363,648	+				+0.0
1,363,649	-				-0.7
1,363,649	-				-0.2
1,363,670	+				-0.9
1,363,671	-				+0.0
1,363,671	-				-0.2
1,363,671	-				+0.2
1,363,671	-				-0.9
1,363,692	+				-1.4
1,363,692	+				+0.8
1,363,692	+				-1.7
1,363,692	+				-0.0
1,363,692	+				-0.6
1,363,692	+				+0.4
1,363,693	-				+0.6
1,363,693	-				-0.4
1,363,693	-				+1.1
1,363,693	-				-0.7
1,363,759	+				+0.3
1,363,759	+				+1.1
1,363,759	+				-0.2
1,363,760	-				+0.8
1,363,760	-				+1.5
1,363,760	-				-0.1
1,363,790	+				-0.5
1,363,790	+				+0.3
1,363,790	+				-2.6
1,363,790	+				+0.3
1,363,790	+				-0.0
1,363,790	+				+0.4
1,363,790	+				-0.3
1,363,790	+				+0.0
1,363,791	-				+1.0
1,363,791	-				+1.0
1,363,791	-				+0.9
1,363,791	-				-1.1
1,363,791	-				-0.6
1,363,791	-				-0.4
1,363,791	-				+1.2
1,363,791	-				+0.0
1,363,793	-				-0.5
1,363,793	-				+1.0
1,363,860	+				+0.7
1,363,860	+				-1.7
1,363,860	+				-0.8
1,363,860	+				-0.3
1,363,861	-				-0.1
1,363,861	-				+0.3
1,363,861	-				+0.4
1,363,904	+				+0.5
1,363,936	+				-0.2
1,363,936	+				+0.0
1,363,936	+				-0.5
1,363,936	+				+0.8
1,363,937	-				+1.1
1,363,937	-				+0.0
1,363,937	-				-0.3
1,363,937	-				+2.6
1,364,224	-		ABZR87_RS22310	0.42	+0.2
1,364,224	-		ABZR87_RS22310	0.42	+0.3
1,364,239	-		ABZR87_RS22310	0.44	+0.9
1,364,292	+		ABZR87_RS22310	0.51	+0.0
1,364,292	+		ABZR87_RS22310	0.51	-0.5
1,364,292	+		ABZR87_RS22310	0.51	+0.7
1,364,292	+		ABZR87_RS22310	0.51	+0.8
1,364,292	+		ABZR87_RS22310	0.51	+0.1
1,364,293	-		ABZR87_RS22310	0.51	-1.0
1,364,293	-		ABZR87_RS22310	0.51	-0.5
1,364,293	-		ABZR87_RS22310	0.51	+0.0
1,364,360	+		ABZR87_RS22310	0.60	+2.2
1,364,361	-		ABZR87_RS22310	0.61	-0.9
1,364,400	+		ABZR87_RS22310	0.66	-0.0
1,364,400	+		ABZR87_RS22310	0.66	+0.7
1,364,400	+		ABZR87_RS22310	0.66	-0.2
1,364,400	+		ABZR87_RS22310	0.66	-0.8
1,364,401	-		ABZR87_RS22310	0.66	-0.6
1,364,401	-		ABZR87_RS22310	0.66	+1.3
1,364,401	-		ABZR87_RS22310	0.66	-0.3
1,364,401	-		ABZR87_RS22310	0.66	-0.2