Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS20760

Experiment: Ra3_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_1
1,042,890	+		ABZR87_RS20750	0.34	-2.4
1,042,890	+		ABZR87_RS20750	0.34	+0.1
1,042,891	-		ABZR87_RS20750	0.34	-0.2
1,042,891	-		ABZR87_RS20750	0.34	-0.6
1,042,891	-		ABZR87_RS20750	0.34	-1.1
1,042,911	+		ABZR87_RS20750	0.40	+1.0
1,042,911	+		ABZR87_RS20750	0.40	+0.5
1,042,911	+		ABZR87_RS20750	0.40	-1.3
1,042,912	-		ABZR87_RS20750	0.40	-0.8
1,042,912	-		ABZR87_RS20750	0.40	-1.6
1,042,912	-		ABZR87_RS20750	0.40	+0.2
1,042,929	+		ABZR87_RS20750	0.45	-1.5
1,042,930	-		ABZR87_RS20750	0.45	-1.1
1,042,953	+		ABZR87_RS20750	0.52	+0.0
1,042,954	-		ABZR87_RS20750	0.53	-0.6
1,042,956	+		ABZR87_RS20750	0.53	-1.5
1,042,956	+		ABZR87_RS20750	0.53	-0.4
1,042,956	+		ABZR87_RS20750	0.53	+0.7
1,042,956	+		ABZR87_RS20750	0.53	+1.1
1,042,957	-		ABZR87_RS20750	0.53	-1.6
1,042,957	-		ABZR87_RS20750	0.53	-0.6
1,042,971	+		ABZR87_RS20750	0.58	+0.5
1,042,972	-		ABZR87_RS20750	0.58	+0.3
1,043,007	+		ABZR87_RS20750	0.68	+0.7
1,043,008	-		ABZR87_RS20750	0.68	+2.3
1,043,010	+		ABZR87_RS20750	0.69	-0.0
1,043,011	-		ABZR87_RS20750	0.69	-1.2
1,043,011	-		ABZR87_RS20750	0.69	-1.0
1,043,161	+				-0.1
1,043,161	+				-2.0
1,043,162	-				+2.9
1,043,239	+		ABZR87_RS20755	0.14	+0.3
1,043,239	+		ABZR87_RS20755	0.14	-0.8
1,043,239	+		ABZR87_RS20755	0.14	-0.3
1,043,240	-		ABZR87_RS20755	0.14	-0.4
1,043,240	-		ABZR87_RS20755	0.14	-2.1
1,043,240	-		ABZR87_RS20755	0.14	-0.4
1,043,240	-		ABZR87_RS20755	0.14	+0.4
1,043,240	-		ABZR87_RS20755	0.14	-0.1
1,043,245	+		ABZR87_RS20755	0.15	-0.3
1,043,500	+		ABZR87_RS20755	0.49	-0.1
1,043,500	+		ABZR87_RS20755	0.49	+0.5
1,043,500	+		ABZR87_RS20755	0.49	+0.8
1,043,500	+		ABZR87_RS20755	0.49	-0.0
1,043,501	-		ABZR87_RS20755	0.49	-0.0
1,043,501	-		ABZR87_RS20755	0.49	-0.1
1,043,501	-		ABZR87_RS20755	0.49	-1.5
1,043,525	-		ABZR87_RS20755	0.53	+0.9
1,043,546	+		ABZR87_RS20755	0.56	-1.2
1,043,680	+		ABZR87_RS20755	0.74	-0.0
1,043,680	+		ABZR87_RS20755	0.74	+0.6
1,043,680	+		ABZR87_RS20755	0.74	+0.2
1,043,680	+		ABZR87_RS20755	0.74	-0.7
1,043,680	+		ABZR87_RS20755	0.74	-0.3
1,043,681	-		ABZR87_RS20755	0.74	+1.3
1,043,796	+		ABZR87_RS20755	0.89	+1.3
1,043,796	+		ABZR87_RS20755	0.89	+0.1
1,043,796	+		ABZR87_RS20755	0.89	-0.5
1,043,797	-		ABZR87_RS20755	0.89	-0.0
1,043,888	+				-0.4
1,043,889	+				-0.3
1,043,889	+				+0.4
1,043,890	-				-0.5
1,043,907	+				-0.7
1,043,908	-				-0.6
1,044,068	-				+0.0
1,044,099	+		ABZR87_RS20760	0.12	+0.7
1,044,213	+		ABZR87_RS20760	0.18	+0.3
1,044,213	+		ABZR87_RS20760	0.18	+0.0
1,044,213	+		ABZR87_RS20760	0.18	-1.0
1,044,213	+		ABZR87_RS20760	0.18	+0.1
1,044,213	+		ABZR87_RS20760	0.18	+1.1
1,044,214	-		ABZR87_RS20760	0.18	+0.2
1,044,214	-		ABZR87_RS20760	0.18	-0.1
1,044,214	-		ABZR87_RS20760	0.18	-0.4
1,044,472	-		ABZR87_RS20760	0.32	+0.2
1,044,472	-		ABZR87_RS20760	0.32	+1.6
1,044,769	-		ABZR87_RS20760	0.48	+1.2
1,044,942	+		ABZR87_RS20760	0.58	-0.7
1,044,942	+		ABZR87_RS20760	0.58	-0.3
1,044,942	+		ABZR87_RS20760	0.58	-0.4
1,044,942	+		ABZR87_RS20760	0.58	+0.6
1,044,943	-		ABZR87_RS20760	0.58	+0.1
1,044,943	-		ABZR87_RS20760	0.58	+0.2
1,044,943	-		ABZR87_RS20760	0.58	-0.2
1,044,943	-		ABZR87_RS20760	0.58	+0.0
1,044,954	+		ABZR87_RS20760	0.58	+1.1
1,044,954	+		ABZR87_RS20760	0.58	-0.2
1,044,955	-		ABZR87_RS20760	0.58	+0.4
1,044,955	-		ABZR87_RS20760	0.58	+0.5
1,045,003	-		ABZR87_RS20760	0.61	-0.1
1,045,194	+		ABZR87_RS20760	0.71	-0.1
1,045,194	+		ABZR87_RS20760	0.71	+1.0
1,045,194	+		ABZR87_RS20760	0.71	-0.6
1,045,195	-		ABZR87_RS20760	0.72	+0.3
1,045,195	-		ABZR87_RS20760	0.72	+0.0
1,045,195	-		ABZR87_RS20760	0.72	+0.3
1,045,195	-		ABZR87_RS20760	0.72	+1.4
1,045,225	+		ABZR87_RS20760	0.73	-0.9
1,045,225	+		ABZR87_RS20760	0.73	+0.9
1,045,266	+		ABZR87_RS20760	0.75	-0.1
1,045,267	-		ABZR87_RS20760	0.75	+0.0
1,045,381	-		ABZR87_RS20760	0.82	+0.5
1,045,440	+		ABZR87_RS20760	0.85	-0.6
1,045,441	-		ABZR87_RS20760	0.85	-0.6
1,045,455	+		ABZR87_RS20760	0.86	+0.7
1,045,455	+		ABZR87_RS20760	0.86	-0.6
1,045,467	+		ABZR87_RS20760	0.86	+0.1
1,045,467	+		ABZR87_RS20760	0.86	-0.4
1,045,467	+		ABZR87_RS20760	0.86	-0.4
1,045,467	+		ABZR87_RS20760	0.86	+0.1
1,045,467	+		ABZR87_RS20760	0.86	+0.2
1,045,468	-		ABZR87_RS20760	0.86	-1.2
1,045,555	+				-0.5
1,045,557	+				-0.3
1,045,557	+				+0.6
1,045,557	+				-0.3
1,045,558	-				+0.6
1,045,558	-				-1.5
1,045,559	-				+0.6
1,045,569	+				-0.9
1,045,570	-				-0.8
1,045,720	+				-0.5
1,045,720	+				-0.8
1,045,720	+				-0.1
1,045,721	-				-0.6
1,045,721	-				+2.3
1,045,721	-				-1.6
1,045,828	+		ABZR87_RS20765	0.10	+0.8
1,045,828	+		ABZR87_RS20765	0.10	+0.0
1,045,829	-		ABZR87_RS20765	0.10	-0.1
1,045,829	-		ABZR87_RS20765	0.10	-0.6
1,045,829	-		ABZR87_RS20765	0.10	-0.9
1,045,829	-		ABZR87_RS20765	0.10	-2.4
1,045,946	-		ABZR87_RS20765	0.22	-1.4
1,045,946	-		ABZR87_RS20765	0.22	+1.1
1,046,113	+		ABZR87_RS20765	0.37	-0.4
1,046,113	+		ABZR87_RS20765	0.37	-0.2
1,046,113	+		ABZR87_RS20765	0.37	-0.5
1,046,114	-		ABZR87_RS20765	0.38	+0.7
1,046,119	+		ABZR87_RS20765	0.38	-0.9
1,046,119	+		ABZR87_RS20765	0.38	+0.2
1,046,119	+		ABZR87_RS20765	0.38	+0.3
1,046,120	-		ABZR87_RS20765	0.38	+0.1
1,046,120	-		ABZR87_RS20765	0.38	+1.6
1,046,120	-		ABZR87_RS20765	0.38	-0.5
1,046,120	-		ABZR87_RS20765	0.38	+0.1
1,046,120	-		ABZR87_RS20765	0.38	+0.1
1,046,120	-		ABZR87_RS20765	0.38	-0.2
1,046,332	+		ABZR87_RS20765	0.58	+0.4
1,046,332	+		ABZR87_RS20765	0.58	-1.9
1,046,332	+		ABZR87_RS20765	0.58	-1.1
1,046,333	-		ABZR87_RS20765	0.58	-1.0
1,046,344	+		ABZR87_RS20765	0.59	-0.5
1,046,345	-		ABZR87_RS20765	0.59	-1.0
1,046,345	-		ABZR87_RS20765	0.59	-0.3
1,046,440	+		ABZR87_RS20765	0.68	-0.2
1,046,441	-		ABZR87_RS20765	0.69	-0.4
1,046,441	-		ABZR87_RS20765	0.69	+0.1
1,046,441	-		ABZR87_RS20765	0.69	+0.6
1,046,464	+		ABZR87_RS20765	0.71	-1.3
1,046,464	+		ABZR87_RS20765	0.71	-0.2
1,046,465	-		ABZR87_RS20765	0.71	+0.0
1,046,465	-		ABZR87_RS20765	0.71	-0.4
1,046,465	-		ABZR87_RS20765	0.71	+0.2
1,046,465	-		ABZR87_RS20765	0.71	+0.5
1,046,476	+		ABZR87_RS20765	0.72	-0.9
1,046,476	+		ABZR87_RS20765	0.72	+0.2
1,046,476	+		ABZR87_RS20765	0.72	+0.7
1,046,476	+		ABZR87_RS20765	0.72	+1.0
1,046,476	+		ABZR87_RS20765	0.72	+0.5
1,046,477	-		ABZR87_RS20765	0.72	-0.6
1,046,477	-		ABZR87_RS20765	0.72	-0.0
1,046,477	-		ABZR87_RS20765	0.72	+0.5
1,046,477	-		ABZR87_RS20765	0.72	+0.7
1,046,477	-		ABZR87_RS20765	0.72	-0.8
1,046,477	-		ABZR87_RS20765	0.72	+0.7
1,046,477	-		ABZR87_RS20765	0.72	-1.5
1,046,713	+				-0.5