Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05435

Experiment: Ra3_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_1
1,155,568	+				+0.5
1,155,568	+				-0.4
1,155,568	+				-0.4
1,155,568	+				+1.1
1,155,568	+				-0.5
1,155,568	+				-0.1
1,155,568	+				+0.3
1,155,569	-				-0.2
1,155,569	-				-0.5
1,155,569	-				+0.3
1,155,569	-				+0.2
1,155,569	-				-1.2
1,155,569	-				-0.5
1,155,569	-				+0.0
1,155,572	+				-0.2
1,155,572	+				+0.1
1,155,572	+				+0.0
1,155,572	+				+0.2
1,155,573	-				-0.6
1,155,573	-				-0.0
1,155,573	-				-0.4
1,155,688	+				+1.4
1,155,689	-				+0.7
1,155,689	-				-0.4
1,155,689	-				+0.7
1,155,689	-				-0.4
1,155,689	-				-0.2
1,155,750	+				+0.3
1,155,750	+				-0.6
1,155,750	+				+0.5
1,155,750	+				+0.0
1,155,750	+				+0.1
1,155,750	+				-0.6
1,155,750	+				+1.0
1,155,751	-				-0.1
1,155,751	-				-0.4
1,155,751	-				+0.7
1,155,842	+				+0.1
1,155,842	+				+0.8
1,155,843	-				+0.1
1,155,843	-				-0.7
1,155,843	-				+0.4
1,155,843	-				+0.1
1,155,861	-				+0.4
1,155,876	+		ABZR87_RS05430	0.10	-0.7
1,155,877	-		ABZR87_RS05430	0.11	-0.3
1,155,877	-		ABZR87_RS05430	0.11	+0.7
1,155,944	+		ABZR87_RS05430	0.33	-0.1
1,155,944	+		ABZR87_RS05430	0.33	+0.4
1,155,944	+		ABZR87_RS05430	0.33	-0.6
1,155,944	+		ABZR87_RS05430	0.33	+0.4
1,155,944	+		ABZR87_RS05430	0.33	+0.8
1,155,945	-		ABZR87_RS05430	0.34	+0.2
1,155,997	+		ABZR87_RS05430	0.51	+0.8
1,156,112	+				-1.3
1,156,112	+				-0.0
1,156,120	+				+1.8
1,156,120	+				-0.2
1,156,120	+				-0.8
1,156,120	+				+0.2
1,156,120	+				-0.3
1,156,120	+				-0.1
1,156,120	+				+0.3
1,156,120	+				-0.8
1,156,120	+				+0.9
1,156,120	+				+0.9
1,156,121	-				-1.1
1,156,121	-				-0.4
1,156,121	-				+0.4
1,156,121	-				+1.3
1,156,121	-				-0.6
1,156,121	-				-0.0
1,156,160	+				-0.1
1,156,160	+				-0.8
1,156,160	+				-0.3
1,156,229	+				+0.0
1,156,229	+				+0.3
1,156,230	-				+0.1
1,156,233	+				+0.3
1,156,233	+				+0.8
1,156,234	-				+0.6
1,156,234	-				+0.1
1,156,258	+				+0.2
1,156,258	+				-0.8
1,156,258	+				+1.4
1,156,258	+				+0.5
1,156,259	-				+0.1
1,156,259	-				+0.0
1,156,259	-				+0.4
1,156,259	-				+0.1
1,156,259	-				+0.2
1,156,259	-				-0.5
1,156,294	+				+0.2
1,156,294	+				+0.2
1,156,294	+				+0.2
1,156,298	+				+0.0
1,156,298	+				+1.2
1,156,298	+				+0.1
1,156,298	+				-0.6
1,156,298	+				+0.0
1,156,298	+				+0.4
1,156,298	+				-0.2
1,156,299	-				-1.3
1,156,299	-				+0.2
1,156,299	-				-0.3
1,156,299	-				-1.3
1,156,299	-				+0.3
1,156,299	-				-1.4
1,156,299	-				+2.4
1,156,299	-				-0.6
1,156,299	-				+0.1
1,156,299	-				+0.8
1,156,299	-				-0.4
1,156,299	-				+0.6
1,156,299	-				+0.2
1,156,299	-				-0.6
1,156,299	-				+1.3
1,156,341	+				-0.4
1,156,341	+				-1.6
1,156,342	-				+2.6
1,156,342	-				+1.6
1,156,342	-				+0.6
1,156,376	+				+0.5
1,156,376	+				-0.0
1,156,376	+				+1.0
1,156,377	-				-0.0
1,156,429	+				+0.7
1,156,429	+				+0.5
1,156,429	+				+1.4
1,156,429	+				+0.6
1,156,430	-				+0.5
1,156,430	-				-0.1
1,156,430	-				+1.2
1,156,472	-				+0.5
1,156,525	-		ABZR87_RS05435	0.13	+0.6
1,156,525	-		ABZR87_RS05435	0.13	+1.2
1,156,525	-		ABZR87_RS05435	0.13	+1.0
1,156,581	+		ABZR87_RS05435	0.24	+0.4
1,156,581	+		ABZR87_RS05435	0.24	+1.1
1,156,581	+		ABZR87_RS05435	0.24	+1.3
1,156,581	+		ABZR87_RS05435	0.24	+2.2
1,156,582	-		ABZR87_RS05435	0.24	+1.7
1,156,582	-		ABZR87_RS05435	0.24	+1.4
1,156,582	-		ABZR87_RS05435	0.24	+0.9
1,156,646	+		ABZR87_RS05435	0.37	+1.3
1,156,647	-		ABZR87_RS05435	0.38	+1.7
1,156,734	+		ABZR87_RS05435	0.55	+0.6
1,156,734	+		ABZR87_RS05435	0.55	+0.7
1,156,734	+		ABZR87_RS05435	0.55	+0.7
1,156,734	+		ABZR87_RS05435	0.55	+1.2
1,156,734	+		ABZR87_RS05435	0.55	+1.4
1,156,735	-		ABZR87_RS05435	0.55	+2.2
1,156,735	-		ABZR87_RS05435	0.55	+0.8
1,156,735	-		ABZR87_RS05435	0.55	+0.9
1,156,788	+		ABZR87_RS05435	0.66	+1.3
1,156,789	-		ABZR87_RS05435	0.66	+1.4
1,156,789	-		ABZR87_RS05435	0.66	+1.6
1,156,817	-		ABZR87_RS05435	0.72	+0.1
1,156,817	-		ABZR87_RS05435	0.72	+1.8
1,156,817	-		ABZR87_RS05435	0.72	+0.2
1,156,880	+		ABZR87_RS05435	0.85	+2.5
1,156,950	-				-0.1
1,156,950	-				+0.5
1,156,961	-				-0.1
1,157,015	+				-1.1
1,157,015	+				-0.4
1,157,015	+				-0.1
1,157,016	-				-0.2
1,157,016	-				+0.8
1,157,016	-				-1.2
1,157,016	-				-1.4
1,157,029	+				-0.4
1,157,030	-				-0.4
1,157,360	+		ABZR87_RS05440	0.22	-0.1
1,157,360	+		ABZR87_RS05440	0.22	+2.4
1,157,360	+		ABZR87_RS05440	0.22	-0.6
1,157,361	-		ABZR87_RS05440	0.22	-0.5
1,157,407	+		ABZR87_RS05440	0.25	+2.1
1,157,408	-		ABZR87_RS05440	0.25	+0.1
1,157,408	-		ABZR87_RS05440	0.25	-0.4
1,157,553	+		ABZR87_RS05440	0.34	-1.3
1,157,553	+		ABZR87_RS05440	0.34	-1.4
1,157,553	+		ABZR87_RS05440	0.34	+0.4
1,157,553	+		ABZR87_RS05440	0.34	+1.2
1,157,554	-		ABZR87_RS05440	0.34	+1.1
1,157,705	+		ABZR87_RS05440	0.43	-1.1
1,157,706	-		ABZR87_RS05440	0.43	+0.7
1,157,706	-		ABZR87_RS05440	0.43	-1.5
1,157,751	-		ABZR87_RS05440	0.45	-2.6
1,157,751	-		ABZR87_RS05440	0.45	+0.3
1,157,782	+		ABZR87_RS05440	0.47	-0.2
1,157,819	+		ABZR87_RS05440	0.49	+0.4
1,157,850	-		ABZR87_RS05440	0.51	+0.2
1,157,885	+		ABZR87_RS05440	0.53	-0.3
1,157,886	-		ABZR87_RS05440	0.53	+0.3
1,157,886	-		ABZR87_RS05440	0.53	+0.2
1,157,886	-		ABZR87_RS05440	0.53	+1.0
1,157,924	+		ABZR87_RS05440	0.56	+0.9
1,157,925	-		ABZR87_RS05440	0.56	-1.3
1,157,935	+		ABZR87_RS05440	0.56	-0.2
1,157,935	+		ABZR87_RS05440	0.56	-1.0
1,157,935	+		ABZR87_RS05440	0.56	-0.8
1,157,935	+		ABZR87_RS05440	0.56	+3.0
1,157,936	-		ABZR87_RS05440	0.56	+0.1
1,157,936	-		ABZR87_RS05440	0.56	-0.3
1,157,936	-		ABZR87_RS05440	0.56	-0.4