Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05320

Experiment: Ra3_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_1
1,120,982	+		ABZR87_RS05315	0.69	+1.6
1,120,982	+		ABZR87_RS05315	0.69	+1.5
1,120,983	-		ABZR87_RS05315	0.69	+2.3
1,120,983	-		ABZR87_RS05315	0.69	+1.2
1,120,992	-		ABZR87_RS05315	0.69	+2.9
1,121,076	-		ABZR87_RS05315	0.72	+1.7
1,121,076	-		ABZR87_RS05315	0.72	+0.5
1,121,076	-		ABZR87_RS05315	0.72	+1.4
1,121,096	+		ABZR87_RS05315	0.73	+1.1
1,121,096	+		ABZR87_RS05315	0.73	+1.5
1,121,096	+		ABZR87_RS05315	0.73	+1.1
1,121,096	+		ABZR87_RS05315	0.73	+1.0
1,121,096	+		ABZR87_RS05315	0.73	+1.9
1,121,096	+		ABZR87_RS05315	0.73	+1.0
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+2.1
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+2.1
1,121,097	-		ABZR87_RS05315	0.73	+2.5
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+1.3
1,121,097	-		ABZR87_RS05315	0.73	+2.8
1,121,171	+		ABZR87_RS05315	0.75	+0.8
1,121,172	-		ABZR87_RS05315	0.75	+0.1
1,121,172	-		ABZR87_RS05315	0.75	+1.1
1,121,172	-		ABZR87_RS05315	0.75	+1.7
1,121,172	-		ABZR87_RS05315	0.75	+1.5
1,121,172	-		ABZR87_RS05315	0.75	+2.4
1,121,172	-		ABZR87_RS05315	0.75	+2.0
1,121,172	-		ABZR87_RS05315	0.75	+2.5
1,121,258	+		ABZR87_RS05315	0.78	+1.1
1,121,258	+		ABZR87_RS05315	0.78	+1.0
1,121,259	-		ABZR87_RS05315	0.78	+1.9
1,121,259	-		ABZR87_RS05315	0.78	+1.9
1,121,259	-		ABZR87_RS05315	0.78	+1.4
1,121,259	-		ABZR87_RS05315	0.78	+1.7
1,121,373	-		ABZR87_RS05315	0.81	+1.6
1,121,432	+		ABZR87_RS05315	0.83	+2.5
1,121,432	+		ABZR87_RS05315	0.83	+1.5
1,121,433	-		ABZR87_RS05315	0.83	+1.0
1,121,433	-		ABZR87_RS05315	0.83	+1.9
1,121,478	-		ABZR87_RS05315	0.85	+1.0
1,121,478	-		ABZR87_RS05315	0.85	+2.0
1,121,579	+		ABZR87_RS05315	0.88	+1.2
1,121,579	+		ABZR87_RS05315	0.88	+1.9
1,121,579	+		ABZR87_RS05315	0.88	+0.8
1,121,579	+		ABZR87_RS05315	0.88	+1.5
1,121,580	-		ABZR87_RS05315	0.88	+2.5
1,121,580	-		ABZR87_RS05315	0.88	+1.6
1,121,580	-		ABZR87_RS05315	0.88	+2.2
1,121,580	-		ABZR87_RS05315	0.88	+2.4
1,122,058	+				+2.9
1,122,058	+				+3.1
1,122,058	+				+2.4
1,122,058	+				+3.5
1,122,058	+				+2.3
1,122,059	-				+2.3
1,122,059	-				+3.3
1,122,059	-				+3.5
1,122,059	-				+2.5
1,122,059	-				+2.8
1,122,059	-				+3.8
1,122,059	-				+3.5
1,122,112	+				+3.0
1,122,286	+		ABZR87_RS05320	0.21	+1.2
1,122,287	-		ABZR87_RS05320	0.21	+2.6
1,122,287	-		ABZR87_RS05320	0.21	+2.8
1,122,293	+		ABZR87_RS05320	0.21	+1.6
1,122,294	-		ABZR87_RS05320	0.21	+3.6
1,122,294	-		ABZR87_RS05320	0.21	+3.5
1,122,337	+		ABZR87_RS05320	0.24	+4.0
1,122,337	+		ABZR87_RS05320	0.24	+2.7
1,122,337	+		ABZR87_RS05320	0.24	+3.5
1,122,338	-		ABZR87_RS05320	0.24	+3.7
1,122,338	-		ABZR87_RS05320	0.24	+3.5
1,122,338	-		ABZR87_RS05320	0.24	+2.9
1,122,338	-		ABZR87_RS05320	0.24	+2.6
1,122,338	-		ABZR87_RS05320	0.24	+2.9
1,122,351	+		ABZR87_RS05320	0.25	+4.4
1,122,352	-		ABZR87_RS05320	0.25	+3.2
1,122,352	-		ABZR87_RS05320	0.25	+3.5
1,122,388	+		ABZR87_RS05320	0.27	+0.8
1,122,388	+		ABZR87_RS05320	0.27	+3.4
1,122,388	+		ABZR87_RS05320	0.27	+2.7
1,122,388	+		ABZR87_RS05320	0.27	+2.8
1,122,389	-		ABZR87_RS05320	0.27	+3.3
1,122,389	-		ABZR87_RS05320	0.27	+2.5
1,122,400	+		ABZR87_RS05320	0.28	+2.0
1,122,401	-		ABZR87_RS05320	0.28	+3.0
1,122,401	-		ABZR87_RS05320	0.28	+2.8
1,122,427	+		ABZR87_RS05320	0.30	+2.1
1,122,427	+		ABZR87_RS05320	0.30	+3.4
1,122,427	+		ABZR87_RS05320	0.30	+0.8
1,122,428	-		ABZR87_RS05320	0.30	+3.0
1,122,428	-		ABZR87_RS05320	0.30	+2.8
1,122,428	-		ABZR87_RS05320	0.30	+3.0
1,122,428	-		ABZR87_RS05320	0.30	+2.7
1,122,428	-		ABZR87_RS05320	0.30	+2.7
1,122,428	-		ABZR87_RS05320	0.30	+2.8
1,122,428	-		ABZR87_RS05320	0.30	+2.1
1,122,428	-		ABZR87_RS05320	0.30	+3.2
1,122,459	+		ABZR87_RS05320	0.32	+2.5
1,122,459	+		ABZR87_RS05320	0.32	+2.7
1,122,459	+		ABZR87_RS05320	0.32	+3.3
1,122,459	+		ABZR87_RS05320	0.32	+3.5
1,122,459	+		ABZR87_RS05320	0.32	+3.5
1,122,459	+		ABZR87_RS05320	0.32	+2.9
1,122,459	+		ABZR87_RS05320	0.32	+3.6
1,122,460	-		ABZR87_RS05320	0.32	+2.8
1,122,460	-		ABZR87_RS05320	0.32	+2.8
1,122,460	-		ABZR87_RS05320	0.32	+3.3
1,122,481	+		ABZR87_RS05320	0.33	+3.4
1,122,481	+		ABZR87_RS05320	0.33	+1.8
1,122,481	+		ABZR87_RS05320	0.33	+2.3
1,122,482	-		ABZR87_RS05320	0.33	+2.4
1,122,482	-		ABZR87_RS05320	0.33	+3.6
1,122,547	+		ABZR87_RS05320	0.38	+2.1
1,122,550	-		ABZR87_RS05320	0.38	+2.0
1,122,565	+		ABZR87_RS05320	0.39	+3.6
1,122,566	-		ABZR87_RS05320	0.39	+2.4
1,122,566	-		ABZR87_RS05320	0.39	+2.5
1,122,616	+		ABZR87_RS05320	0.42	+3.7
1,122,616	+		ABZR87_RS05320	0.42	+2.9
1,122,616	+		ABZR87_RS05320	0.42	+1.6
1,122,617	-		ABZR87_RS05320	0.42	+3.9
1,122,617	-		ABZR87_RS05320	0.42	+2.3
1,122,617	-		ABZR87_RS05320	0.42	+2.7
1,122,617	-		ABZR87_RS05320	0.42	+3.3
1,122,619	+		ABZR87_RS05320	0.42	+1.4
1,122,619	+		ABZR87_RS05320	0.42	+3.2
1,122,619	+		ABZR87_RS05320	0.42	+2.6
1,122,619	+		ABZR87_RS05320	0.42	+3.1
1,122,620	-		ABZR87_RS05320	0.42	+2.8
1,122,620	-		ABZR87_RS05320	0.42	+2.7
1,122,620	-		ABZR87_RS05320	0.42	+3.2
1,122,620	-		ABZR87_RS05320	0.42	+2.4
1,122,620	-		ABZR87_RS05320	0.42	+2.7
1,122,733	+		ABZR87_RS05320	0.50	+4.1
1,122,733	+		ABZR87_RS05320	0.50	+2.9
1,123,130	-		ABZR87_RS05320	0.75	+2.6
1,123,130	-		ABZR87_RS05320	0.75	+2.9
1,123,384	+				+2.4
1,123,385	-				+2.0
1,123,385	-				+2.4
1,123,386	+				+1.7
1,123,386	+				+3.2
1,123,386	+				+2.0
1,123,387	-				+1.4
1,123,387	-				+2.4
1,123,387	-				+2.8
1,123,422	+				-2.4
1,123,507	+				+0.7
1,123,508	-				-0.1
1,123,508	-				-1.2
1,123,508	-				+0.9
1,123,684	+		ABZR87_RS05325	0.13	-0.1
1,123,703	+		ABZR87_RS05325	0.15	+0.2
1,123,703	+		ABZR87_RS05325	0.15	-0.4
1,123,703	+		ABZR87_RS05325	0.15	+1.2
1,123,703	+		ABZR87_RS05325	0.15	-1.2
1,123,703	+		ABZR87_RS05325	0.15	-0.7
1,123,703	+		ABZR87_RS05325	0.15	+1.9
1,123,703	+		ABZR87_RS05325	0.15	-0.1
1,123,703	+		ABZR87_RS05325	0.15	+0.4
1,123,703	+		ABZR87_RS05325	0.15	-0.5
1,123,703	+		ABZR87_RS05325	0.15	-0.8
1,123,703	+		ABZR87_RS05325	0.15	-0.6
1,123,704	-		ABZR87_RS05325	0.15	+0.3
1,123,704	-		ABZR87_RS05325	0.15	-0.4
1,123,704	-		ABZR87_RS05325	0.15	-0.8
1,123,704	-		ABZR87_RS05325	0.15	-0.1
1,123,704	-		ABZR87_RS05325	0.15	-1.0
1,123,704	-		ABZR87_RS05325	0.15	-0.3
1,123,704	-		ABZR87_RS05325	0.15	+0.3
1,123,848	+		ABZR87_RS05325	0.28	-0.9
1,123,848	+		ABZR87_RS05325	0.28	-1.7
1,123,848	+		ABZR87_RS05325	0.28	+0.5
1,123,848	+		ABZR87_RS05325	0.28	+1.3
1,123,849	-		ABZR87_RS05325	0.28	-1.0
1,123,849	-		ABZR87_RS05325	0.28	-0.3
1,123,849	-		ABZR87_RS05325	0.28	-0.0
1,123,849	-		ABZR87_RS05325	0.28	+0.2
1,123,849	-		ABZR87_RS05325	0.28	-1.6
1,123,849	-		ABZR87_RS05325	0.28	+0.5
1,123,853	+		ABZR87_RS05325	0.28	-0.4
1,123,853	+		ABZR87_RS05325	0.28	-0.8
1,123,853	+		ABZR87_RS05325	0.28	-0.2
1,123,854	-		ABZR87_RS05325	0.28	-0.8
1,123,891	+		ABZR87_RS05325	0.32	-0.3
1,123,891	+		ABZR87_RS05325	0.32	+0.3
1,123,891	+		ABZR87_RS05325	0.32	-0.9
1,123,892	-		ABZR87_RS05325	0.32	-0.3
1,123,892	-		ABZR87_RS05325	0.32	-0.9
1,123,892	-		ABZR87_RS05325	0.32	+0.2
1,123,892	-		ABZR87_RS05325	0.32	-0.8
1,123,895	+		ABZR87_RS05325	0.32	+1.5
1,123,895	+		ABZR87_RS05325	0.32	-0.9
1,123,895	+		ABZR87_RS05325	0.32	+0.8
1,123,895	+		ABZR87_RS05325	0.32	+0.7
1,123,895	+		ABZR87_RS05325	0.32	+0.5
1,123,896	-		ABZR87_RS05325	0.32	-1.2
1,123,921	+		ABZR87_RS05325	0.35	+0.5
1,123,921	+		ABZR87_RS05325	0.35	+0.6
1,123,949	+		ABZR87_RS05325	0.37	-0.4
1,123,950	-		ABZR87_RS05325	0.37	-0.3
1,123,957	+		ABZR87_RS05325	0.38	+0.3
1,123,957	+		ABZR87_RS05325	0.38	-0.8
1,123,957	+		ABZR87_RS05325	0.38	-0.6
1,123,957	+		ABZR87_RS05325	0.38	+0.6
1,123,958	-		ABZR87_RS05325	0.38	-0.5
1,123,958	-		ABZR87_RS05325	0.38	-0.1
1,123,958	-		ABZR87_RS05325	0.38	-1.6
1,123,958	-		ABZR87_RS05325	0.38	-0.7
1,124,117	+		ABZR87_RS05325	0.53	-0.9
1,124,117	+		ABZR87_RS05325	0.53	+0.7
1,124,117	+		ABZR87_RS05325	0.53	-0.5
1,124,117	+		ABZR87_RS05325	0.53	+1.2
1,124,118	-		ABZR87_RS05325	0.53	+0.8
1,124,118	-		ABZR87_RS05325	0.53	-0.1
1,124,118	-		ABZR87_RS05325	0.53	+0.4
1,124,118	-		ABZR87_RS05325	0.53	+0.1
1,124,118	-		ABZR87_RS05325	0.53	-0.2
1,124,138	+		ABZR87_RS05325	0.54	+0.3
1,124,138	+		ABZR87_RS05325	0.54	-0.6
1,124,138	+		ABZR87_RS05325	0.54	-0.3
1,124,138	+		ABZR87_RS05325	0.54	+0.2
1,124,139	-		ABZR87_RS05325	0.55	+2.2
1,124,180	+		ABZR87_RS05325	0.58	+0.8
1,124,180	+		ABZR87_RS05325	0.58	-0.7
1,124,180	+		ABZR87_RS05325	0.58	-0.2
1,124,180	+		ABZR87_RS05325	0.58	+1.0
1,124,181	-		ABZR87_RS05325	0.58	-0.1
1,124,181	-		ABZR87_RS05325	0.58	-0.4
1,124,181	-		ABZR87_RS05325	0.58	+0.4
1,124,181	-		ABZR87_RS05325	0.58	-0.4
1,124,181	-		ABZR87_RS05325	0.58	-0.5
1,124,291	+		ABZR87_RS05325	0.68	+0.3
1,124,291	+		ABZR87_RS05325	0.68	+2.4
1,124,291	+		ABZR87_RS05325	0.68	-0.6
1,124,292	-		ABZR87_RS05325	0.69	+0.4
1,124,295	+		ABZR87_RS05325	0.69	-0.1
1,124,295	+		ABZR87_RS05325	0.69	-0.1
1,124,295	+		ABZR87_RS05325	0.69	-1.0
1,124,331	-		ABZR87_RS05325	0.72	-0.6
1,124,331	-		ABZR87_RS05325	0.72	+2.3
1,124,331	-		ABZR87_RS05325	0.72	-0.7
1,124,335	-		ABZR87_RS05325	0.73	+0.2
1,124,336	+		ABZR87_RS05325	0.73	-0.8
1,124,336	+		ABZR87_RS05325	0.73	-0.5
1,124,336	+		ABZR87_RS05325	0.73	-0.2
1,124,412	+		ABZR87_RS05325	0.80	-0.2
1,124,412	+		ABZR87_RS05325	0.80	-0.5
1,124,412	+		ABZR87_RS05325	0.80	+0.4
1,124,412	+		ABZR87_RS05325	0.80	+1.8
1,124,412	+		ABZR87_RS05325	0.80	+1.0
1,124,412	+		ABZR87_RS05325	0.80	-0.1
1,124,413	-		ABZR87_RS05325	0.80	-0.0
1,124,413	-		ABZR87_RS05325	0.80	-1.6
1,124,414	+		ABZR87_RS05325	0.80	-0.0
1,124,414	+		ABZR87_RS05325	0.80	+0.1
1,124,414	+		ABZR87_RS05325	0.80	+0.0
1,124,415	-		ABZR87_RS05325	0.80	+0.2
1,124,415	-		ABZR87_RS05325	0.80	+0.7
1,124,492	+		ABZR87_RS05325	0.87	-0.0