Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05315

Experiment: Ra3_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra3_1
1,117,826	+		ABZR87_RS05310	0.24	+0.7
1,117,827	-		ABZR87_RS05310	0.24	+2.5
1,117,910	+		ABZR87_RS05310	0.30	+2.2
1,117,910	+		ABZR87_RS05310	0.30	+2.4
1,117,910	+		ABZR87_RS05310	0.30	+1.4
1,117,911	-		ABZR87_RS05310	0.31	+1.5
1,117,911	-		ABZR87_RS05310	0.31	+1.8
1,117,911	-		ABZR87_RS05310	0.31	+2.4
1,117,930	+		ABZR87_RS05310	0.32	+1.4
1,117,931	-		ABZR87_RS05310	0.32	+2.4
1,117,931	-		ABZR87_RS05310	0.32	+1.9
1,117,931	-		ABZR87_RS05310	0.32	+3.6
1,117,952	+		ABZR87_RS05310	0.34	+1.9
1,117,952	+		ABZR87_RS05310	0.34	+1.9
1,117,952	+		ABZR87_RS05310	0.34	+1.0
1,117,952	+		ABZR87_RS05310	0.34	+2.0
1,117,952	+		ABZR87_RS05310	0.34	+1.0
1,117,952	+		ABZR87_RS05310	0.34	+0.6
1,117,953	-		ABZR87_RS05310	0.34	+2.2
1,117,953	-		ABZR87_RS05310	0.34	+2.6
1,118,042	+		ABZR87_RS05310	0.41	+1.7
1,118,043	-		ABZR87_RS05310	0.41	+2.0
1,118,162	+		ABZR87_RS05310	0.50	+1.5
1,118,162	+		ABZR87_RS05310	0.50	+0.5
1,118,163	-		ABZR87_RS05310	0.50	+2.1
1,118,163	-		ABZR87_RS05310	0.50	+2.4
1,118,163	-		ABZR87_RS05310	0.50	+1.6
1,118,163	-		ABZR87_RS05310	0.50	+1.3
1,118,163	-		ABZR87_RS05310	0.50	+1.9
1,118,288	+		ABZR87_RS05310	0.60	+1.4
1,118,288	+		ABZR87_RS05310	0.60	+1.3
1,118,289	-		ABZR87_RS05310	0.60	+0.4
1,118,289	-		ABZR87_RS05310	0.60	+1.8
1,118,289	-		ABZR87_RS05310	0.60	+2.9
1,118,309	+		ABZR87_RS05310	0.62	+1.9
1,118,309	+		ABZR87_RS05310	0.62	+1.5
1,118,309	+		ABZR87_RS05310	0.62	+0.2
1,118,310	+		ABZR87_RS05310	0.62	+1.9
1,118,310	-		ABZR87_RS05310	0.62	+2.0
1,118,310	-		ABZR87_RS05310	0.62	+3.3
1,118,310	-		ABZR87_RS05310	0.62	+1.5
1,118,310	-		ABZR87_RS05310	0.62	+1.9
1,118,310	-		ABZR87_RS05310	0.62	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+1.2
1,118,402	+		ABZR87_RS05310	0.69	+1.6
1,118,402	+		ABZR87_RS05310	0.69	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+1.9
1,118,402	+		ABZR87_RS05310	0.69	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+2.4
1,118,402	+		ABZR87_RS05310	0.69	+1.5
1,118,402	+		ABZR87_RS05310	0.69	+1.3
1,118,402	+		ABZR87_RS05310	0.69	+1.6
1,118,402	+		ABZR87_RS05310	0.69	+3.2
1,118,402	+		ABZR87_RS05310	0.69	+1.2
1,118,402	+		ABZR87_RS05310	0.69	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+2.4
1,118,402	+		ABZR87_RS05310	0.69	+0.1
1,118,402	+		ABZR87_RS05310	0.69	+1.2
1,118,402	+		ABZR87_RS05310	0.69	+1.0
1,118,402	+		ABZR87_RS05310	0.69	+1.7
1,118,402	+		ABZR87_RS05310	0.69	+1.4
1,118,402	+		ABZR87_RS05310	0.69	+0.8
1,118,402	+		ABZR87_RS05310	0.69	+1.2
1,118,402	+		ABZR87_RS05310	0.69	+2.2
1,118,402	+		ABZR87_RS05310	0.69	+2.4
1,118,402	+		ABZR87_RS05310	0.69	+1.8
1,118,403	-		ABZR87_RS05310	0.69	+1.4
1,118,403	-		ABZR87_RS05310	0.69	+2.1
1,118,403	-		ABZR87_RS05310	0.69	-0.0
1,118,403	-		ABZR87_RS05310	0.69	+2.6
1,118,403	-		ABZR87_RS05310	0.69	+1.8
1,118,403	-		ABZR87_RS05310	0.69	+2.1
1,118,403	-		ABZR87_RS05310	0.69	+1.7
1,118,403	-		ABZR87_RS05310	0.69	+1.9
1,118,403	-		ABZR87_RS05310	0.69	+1.8
1,118,403	-		ABZR87_RS05310	0.69	+1.6
1,118,403	-		ABZR87_RS05310	0.69	+2.1
1,118,403	-		ABZR87_RS05310	0.69	+2.0
1,118,403	-		ABZR87_RS05310	0.69	+1.7
1,118,403	-		ABZR87_RS05310	0.69	+1.9
1,118,403	-		ABZR87_RS05310	0.69	+1.7
1,118,403	-		ABZR87_RS05310	0.69	+4.5
1,118,403	-		ABZR87_RS05310	0.69	+2.1
1,118,403	-		ABZR87_RS05310	0.69	+1.7
1,118,403	-		ABZR87_RS05310	0.69	+1.7
1,118,403	-		ABZR87_RS05310	0.69	+2.4
1,118,403	-		ABZR87_RS05310	0.69	+2.7
1,118,403	-		ABZR87_RS05310	0.69	+2.0
1,118,403	-		ABZR87_RS05310	0.69	+2.0
1,118,403	-		ABZR87_RS05310	0.69	+2.1
1,118,713	+				+0.3
1,118,792	+				-1.4
1,118,793	-				+2.4
1,118,793	-				+0.0
1,118,954	+				-0.9
1,118,955	-				+2.3
1,118,955	-				+3.0
1,119,038	+				+1.2
1,119,038	+				+1.6
1,119,038	+				+3.4
1,119,038	+				+1.3
1,119,038	+				+2.0
1,119,038	+				+1.9
1,119,038	+				+1.8
1,119,038	+				+1.6
1,119,038	+				+2.2
1,119,038	+				+2.1
1,119,038	+				+0.8
1,119,038	+				+0.9
1,119,038	+				+1.2
1,119,038	+				+2.1
1,119,038	+				+1.4
1,119,038	+				+2.4
1,119,039	-				+1.0
1,119,039	-				+1.8
1,119,039	-				+2.6
1,119,039	-				+2.8
1,119,039	-				+3.1
1,119,039	-				+2.8
1,119,039	-				+1.6
1,119,039	-				+2.6
1,119,039	-				+2.7
1,119,039	-				+2.6
1,119,039	-				+1.6
1,119,039	-				+3.6
1,119,039	-				+1.9
1,119,040	+				+1.6
1,119,040	+				+2.0
1,119,040	+				+0.4
1,119,040	+				+1.4
1,119,040	+				+1.8
1,119,041	-				+2.6
1,119,041	-				+1.8
1,119,041	-				+1.4
1,119,041	-				+2.3
1,119,281	+		ABZR87_RS05315	0.15	+1.5
1,119,281	+		ABZR87_RS05315	0.15	+1.5
1,119,281	+		ABZR87_RS05315	0.15	+0.4
1,119,281	+		ABZR87_RS05315	0.15	+2.3
1,119,282	-		ABZR87_RS05315	0.15	+2.2
1,119,282	-		ABZR87_RS05315	0.15	+2.8
1,119,282	-		ABZR87_RS05315	0.15	+1.9
1,119,282	-		ABZR87_RS05315	0.15	+1.7
1,119,398	+		ABZR87_RS05315	0.19	+1.0
1,119,422	+		ABZR87_RS05315	0.19	+3.0
1,119,422	+		ABZR87_RS05315	0.19	+1.8
1,119,423	-		ABZR87_RS05315	0.19	+2.4
1,119,423	-		ABZR87_RS05315	0.19	+1.9
1,119,423	-		ABZR87_RS05315	0.19	+1.9
1,119,423	-		ABZR87_RS05315	0.19	+1.8
1,119,635	+		ABZR87_RS05315	0.26	+1.2
1,119,636	-		ABZR87_RS05315	0.26	+2.2
1,119,636	-		ABZR87_RS05315	0.26	+2.3
1,119,758	+		ABZR87_RS05315	0.30	+1.5
1,119,758	+		ABZR87_RS05315	0.30	+0.7
1,119,758	+		ABZR87_RS05315	0.30	+1.8
1,119,759	-		ABZR87_RS05315	0.30	+2.5
1,119,779	+		ABZR87_RS05315	0.31	+1.0
1,119,779	+		ABZR87_RS05315	0.31	+1.6
1,119,779	+		ABZR87_RS05315	0.31	+1.2
1,119,779	+		ABZR87_RS05315	0.31	+0.8
1,119,779	+		ABZR87_RS05315	0.31	+0.8
1,119,779	+		ABZR87_RS05315	0.31	+1.6
1,119,779	+		ABZR87_RS05315	0.31	+0.3
1,119,779	+		ABZR87_RS05315	0.31	+1.0
1,119,780	-		ABZR87_RS05315	0.31	+2.0
1,119,780	-		ABZR87_RS05315	0.31	+1.8
1,119,780	-		ABZR87_RS05315	0.31	+1.3
1,119,780	-		ABZR87_RS05315	0.31	+1.6
1,119,780	-		ABZR87_RS05315	0.31	+2.8
1,119,791	+		ABZR87_RS05315	0.31	+3.4
1,119,791	+		ABZR87_RS05315	0.31	+1.8
1,119,903	-		ABZR87_RS05315	0.35	+1.5
1,120,021	+		ABZR87_RS05315	0.38	+1.9
1,120,144	+		ABZR87_RS05315	0.42	+1.9
1,120,145	-		ABZR87_RS05315	0.42	+1.9
1,120,145	-		ABZR87_RS05315	0.42	+1.1
1,120,147	+		ABZR87_RS05315	0.42	+1.3
1,120,147	+		ABZR87_RS05315	0.42	+2.4
1,120,147	+		ABZR87_RS05315	0.42	+1.4
1,120,147	+		ABZR87_RS05315	0.42	+1.3
1,120,148	-		ABZR87_RS05315	0.42	+3.1
1,120,148	-		ABZR87_RS05315	0.42	+2.1
1,120,148	-		ABZR87_RS05315	0.42	+0.6
1,120,148	-		ABZR87_RS05315	0.42	+2.0
1,120,148	-		ABZR87_RS05315	0.42	+4.4
1,120,211	+		ABZR87_RS05315	0.44	+0.5
1,120,211	+		ABZR87_RS05315	0.44	+2.3
1,120,212	-		ABZR87_RS05315	0.44	+2.5
1,120,212	-		ABZR87_RS05315	0.44	+2.9
1,120,212	-		ABZR87_RS05315	0.44	+3.5
1,120,212	-		ABZR87_RS05315	0.44	+3.1
1,120,212	-		ABZR87_RS05315	0.44	+3.6
1,120,389	-		ABZR87_RS05315	0.50	+2.1
1,120,430	+		ABZR87_RS05315	0.51	+1.4
1,120,430	+		ABZR87_RS05315	0.51	+3.0
1,120,431	-		ABZR87_RS05315	0.51	+1.7
1,120,431	-		ABZR87_RS05315	0.51	+2.4
1,120,431	-		ABZR87_RS05315	0.51	+1.9
1,120,431	-		ABZR87_RS05315	0.51	+2.4
1,120,442	+		ABZR87_RS05315	0.52	+1.0
1,120,442	+		ABZR87_RS05315	0.52	+2.7
1,120,443	-		ABZR87_RS05315	0.52	+1.7
1,120,443	-		ABZR87_RS05315	0.52	+0.8
1,120,443	-		ABZR87_RS05315	0.52	+1.3
1,120,520	+		ABZR87_RS05315	0.54	+1.7
1,120,520	+		ABZR87_RS05315	0.54	+2.2
1,120,520	+		ABZR87_RS05315	0.54	+1.6
1,120,521	-		ABZR87_RS05315	0.54	+1.4
1,120,521	-		ABZR87_RS05315	0.54	+2.5
1,120,536	+		ABZR87_RS05315	0.55	+1.5
1,120,598	+		ABZR87_RS05315	0.57	+1.9
1,120,598	+		ABZR87_RS05315	0.57	+1.7
1,120,598	+		ABZR87_RS05315	0.57	+1.4
1,120,598	+		ABZR87_RS05315	0.57	+1.4
1,120,598	+		ABZR87_RS05315	0.57	+1.4
1,120,599	-		ABZR87_RS05315	0.57	+1.3
1,120,599	-		ABZR87_RS05315	0.57	+1.6
1,120,601	+		ABZR87_RS05315	0.57	+1.5
1,120,601	+		ABZR87_RS05315	0.57	+1.3
1,120,601	+		ABZR87_RS05315	0.57	+1.7
1,120,601	+		ABZR87_RS05315	0.57	+0.5
1,120,602	-		ABZR87_RS05315	0.57	+1.6
1,120,602	-		ABZR87_RS05315	0.57	+2.5
1,120,602	-		ABZR87_RS05315	0.57	+3.4
1,120,602	-		ABZR87_RS05315	0.57	+1.8
1,120,602	-		ABZR87_RS05315	0.57	+3.6
1,120,982	+		ABZR87_RS05315	0.69	+1.6
1,120,982	+		ABZR87_RS05315	0.69	+1.5
1,120,983	-		ABZR87_RS05315	0.69	+2.3
1,120,983	-		ABZR87_RS05315	0.69	+1.2
1,120,992	-		ABZR87_RS05315	0.69	+2.9
1,121,076	-		ABZR87_RS05315	0.72	+1.7
1,121,076	-		ABZR87_RS05315	0.72	+0.5
1,121,076	-		ABZR87_RS05315	0.72	+1.4
1,121,096	+		ABZR87_RS05315	0.73	+1.1
1,121,096	+		ABZR87_RS05315	0.73	+1.5
1,121,096	+		ABZR87_RS05315	0.73	+1.1
1,121,096	+		ABZR87_RS05315	0.73	+1.0
1,121,096	+		ABZR87_RS05315	0.73	+1.9
1,121,096	+		ABZR87_RS05315	0.73	+1.0
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+2.1
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+2.1
1,121,097	-		ABZR87_RS05315	0.73	+2.5
1,121,097	-		ABZR87_RS05315	0.73	+2.2
1,121,097	-		ABZR87_RS05315	0.73	+1.3
1,121,097	-		ABZR87_RS05315	0.73	+2.8
1,121,171	+		ABZR87_RS05315	0.75	+0.8
1,121,172	-		ABZR87_RS05315	0.75	+0.1
1,121,172	-		ABZR87_RS05315	0.75	+1.1
1,121,172	-		ABZR87_RS05315	0.75	+1.7
1,121,172	-		ABZR87_RS05315	0.75	+1.5
1,121,172	-		ABZR87_RS05315	0.75	+2.4
1,121,172	-		ABZR87_RS05315	0.75	+2.0
1,121,172	-		ABZR87_RS05315	0.75	+2.5
1,121,258	+		ABZR87_RS05315	0.78	+1.1
1,121,258	+		ABZR87_RS05315	0.78	+1.0
1,121,259	-		ABZR87_RS05315	0.78	+1.9
1,121,259	-		ABZR87_RS05315	0.78	+1.9
1,121,259	-		ABZR87_RS05315	0.78	+1.4
1,121,259	-		ABZR87_RS05315	0.78	+1.7
1,121,373	-		ABZR87_RS05315	0.81	+1.6
1,121,432	+		ABZR87_RS05315	0.83	+2.5
1,121,432	+		ABZR87_RS05315	0.83	+1.5
1,121,433	-		ABZR87_RS05315	0.83	+1.0
1,121,433	-		ABZR87_RS05315	0.83	+1.9
1,121,478	-		ABZR87_RS05315	0.85	+1.0
1,121,478	-		ABZR87_RS05315	0.85	+2.0
1,121,579	+		ABZR87_RS05315	0.88	+1.2
1,121,579	+		ABZR87_RS05315	0.88	+1.9
1,121,579	+		ABZR87_RS05315	0.88	+0.8
1,121,579	+		ABZR87_RS05315	0.88	+1.5
1,121,580	-		ABZR87_RS05315	0.88	+2.5
1,121,580	-		ABZR87_RS05315	0.88	+1.6
1,121,580	-		ABZR87_RS05315	0.88	+2.2
1,121,580	-		ABZR87_RS05315	0.88	+2.4
1,122,058	+				+2.9
1,122,058	+				+3.1
1,122,058	+				+2.4
1,122,058	+				+3.5
1,122,058	+				+2.3
1,122,059	-				+2.3
1,122,059	-				+3.3
1,122,059	-				+3.5
1,122,059	-				+2.5
1,122,059	-				+2.8
1,122,059	-				+3.8
1,122,059	-				+3.5
1,122,112	+				+3.0
1,122,286	+		ABZR87_RS05320	0.21	+1.2
1,122,287	-		ABZR87_RS05320	0.21	+2.6
1,122,287	-		ABZR87_RS05320	0.21	+2.8
1,122,293	+		ABZR87_RS05320	0.21	+1.6
1,122,294	-		ABZR87_RS05320	0.21	+3.6
1,122,294	-		ABZR87_RS05320	0.21	+3.5
1,122,337	+		ABZR87_RS05320	0.24	+4.0
1,122,337	+		ABZR87_RS05320	0.24	+2.7
1,122,337	+		ABZR87_RS05320	0.24	+3.5
1,122,338	-		ABZR87_RS05320	0.24	+3.7
1,122,338	-		ABZR87_RS05320	0.24	+3.5
1,122,338	-		ABZR87_RS05320	0.24	+2.9
1,122,338	-		ABZR87_RS05320	0.24	+2.6
1,122,338	-		ABZR87_RS05320	0.24	+2.9
1,122,351	+		ABZR87_RS05320	0.25	+4.4
1,122,352	-		ABZR87_RS05320	0.25	+3.2
1,122,352	-		ABZR87_RS05320	0.25	+3.5
1,122,388	+		ABZR87_RS05320	0.27	+0.8
1,122,388	+		ABZR87_RS05320	0.27	+3.4
1,122,388	+		ABZR87_RS05320	0.27	+2.7
1,122,388	+		ABZR87_RS05320	0.27	+2.8
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