Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006325

Experiment: RCH2_defined_glucose_5mM with Epiandrosterone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Epiandrosterone 5 mM
2,688,146	+		ABIE53_006323	0.63	-1.4
2,688,192	-		ABIE53_006323	0.68	-1.7
2,688,311	+		ABIE53_006323	0.81	+0.2
2,688,758	+		ABIE53_006324	0.61	-0.3
2,688,856	+				+2.5
2,688,856	+				+1.8
2,688,949	-		ABIE53_006325	0.16	+0.0
2,688,955	-		ABIE53_006325	0.16	-0.1
2,689,012	+		ABIE53_006325	0.22	-0.4
2,689,014	+		ABIE53_006325	0.22	+2.6
2,689,014	+		ABIE53_006325	0.22	+0.3
2,689,015	-		ABIE53_006325	0.22	-2.0
2,689,015	-		ABIE53_006325	0.22	-0.5
2,689,015	-		ABIE53_006325	0.22	+1.1
2,689,051	-		ABIE53_006325	0.26	-1.7
2,689,091	-		ABIE53_006325	0.30	-1.5
2,689,122	+		ABIE53_006325	0.33	+0.1
2,689,122	+		ABIE53_006325	0.33	-0.1
2,689,139	+		ABIE53_006325	0.34	+0.1
2,689,260	+		ABIE53_006325	0.46	-1.7
2,689,260	+		ABIE53_006325	0.46	-0.4
2,689,351	-		ABIE53_006325	0.55	-1.1
2,689,447	+		ABIE53_006325	0.64	-0.5
2,689,448	-		ABIE53_006325	0.64	-0.1
2,689,455	+		ABIE53_006325	0.65	+0.6
2,689,456	-		ABIE53_006325	0.65	+0.9
2,689,613	+		ABIE53_006325	0.80	-1.4
2,689,613	+		ABIE53_006325	0.80	-0.3
2,689,613	+		ABIE53_006325	0.80	+2.5
2,689,613	+		ABIE53_006325	0.80	+0.3
2,689,613	+		ABIE53_006325	0.80	-0.4
2,689,614	-		ABIE53_006325	0.81	-0.5
2,689,614	-		ABIE53_006325	0.81	-1.7
2,689,829	+				+0.5
2,689,830	-				+1.5
2,689,830	-				-0.4
2,689,964	-				+1.7
2,689,967	-				-0.7
2,690,057	-				-1.0
2,690,093	+		ABIE53_006326	0.11	+0.5
2,690,094	-		ABIE53_006326	0.11	+1.5
2,690,306	+		ABIE53_006326	0.28	-0.5
2,690,508	-		ABIE53_006326	0.43	-0.1
2,690,531	+		ABIE53_006326	0.45	+0.3
2,690,543	+		ABIE53_006326	0.46	+0.1
2,690,544	-		ABIE53_006326	0.46	+0.7
2,690,549	+		ABIE53_006326	0.46	-0.2
2,690,550	-		ABIE53_006326	0.46	-1.3
2,690,550	-		ABIE53_006326	0.46	-1.1
2,690,579	-		ABIE53_006326	0.48	+0.1