Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2004
Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polyethylene glycol 5% |
---|---|---|---|---|---|
remove | |||||
2,085,498 | + | DVU2003 | 0.41 | -0.0 | |
2,085,625 | + | DVU2003 | 0.51 | -0.2 | |
2,085,640 | - | DVU2003 | 0.52 | +1.6 | |
2,085,740 | + | DVU2003 | 0.60 | -0.5 | |
2,085,756 | + | DVU2003 | 0.62 | -0.6 | |
2,085,764 | - | DVU2003 | 0.62 | -0.2 | |
2,085,766 | + | DVU2003 | 0.62 | -0.0 | |
2,085,787 | + | DVU2003 | 0.64 | +0.8 | |
2,085,790 | - | DVU2003 | 0.64 | +0.4 | |
2,085,897 | - | DVU2003 | 0.73 | -3.0 | |
2,085,922 | + | DVU2003 | 0.75 | -0.6 | |
2,085,984 | - | DVU2003 | 0.80 | +0.3 | |
2,085,989 | - | DVU2003 | 0.80 | -0.1 | |
2,086,014 | + | DVU2003 | 0.82 | +2.4 | |
2,086,030 | + | DVU2003 | 0.83 | -0.6 | |
2,086,074 | + | DVU2003 | 0.87 | -0.7 | |
2,087,449 | + | -0.2 | |||
2,087,484 | + | -0.4 | |||
2,087,540 | - | -0.0 | |||
2,088,004 | - | -0.4 | |||
2,088,072 | - | DVU2007 | 0.23 | +0.0 | |
2,088,076 | + | DVU2007 | 0.24 | -0.5 | |
2,088,098 | - | DVU2007 | 0.29 | -0.5 | |
2,088,202 | + | DVU2007 | 0.54 | -0.5 |
Or see this region's nucleotide sequence