Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2691 and DVU2692 are separated by 9 nucleotides DVU2692 and DVU2693 are separated by 85 nucleotides DVU2693 and DVU2694 are separated by 81 nucleotides DVU2694 and DVU2695 are separated by 8 nucleotides DVU2695 and DVU2696 overlap by 4 nucleotides DVU2696 and DVU2697 are separated by 12 nucleotides
DVU2691: DVU2691 - hypothetical protein (TIGR), at 2,805,178 to 2,805,711
DVU2691
DVU2692: DVU2692 - conserved domain protein (TIGR), at 2,805,721 to 2,805,957
DVU2692
DVU2693: DVU2693 - hypothetical protein (TIGR), at 2,806,043 to 2,806,282
DVU2693
DVU2694: DVU2694 - hypothetical protein (TIGR), at 2,806,364 to 2,806,798
DVU2694
DVU2695: DVU2695 - conserved hypothetical protein (TIGR), at 2,806,807 to 2,807,223
DVU2695
DVU2696: DVU2696 - conserved hypothetical protein (TIGR), at 2,807,220 to 2,807,708
DVU2696
DVU2697: DVU2697 - hypothetical protein (TIGR), at 2,807,721 to 2,808,059
DVU2697
Position (kb)
2806
2807 Strain fitness (log2 ratio)
-2
-1
0
1 at 2805.478 kb on + strand, within DVU2691 at 2805.486 kb on - strand, within DVU2691 at 2805.533 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.636 kb on + strand, within DVU2691 at 2805.645 kb on - strand, within DVU2691 at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.743 kb on - strand at 2805.865 kb on + strand, within DVU2692 at 2805.946 kb on - strand at 2806.015 kb on + strand at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.277 kb on - strand at 2806.364 kb on - strand at 2806.365 kb on + strand at 2806.373 kb on - strand at 2806.486 kb on - strand, within DVU2694 at 2806.542 kb on - strand, within DVU2694 at 2806.574 kb on + strand, within DVU2694 at 2806.608 kb on + strand, within DVU2694 at 2806.608 kb on + strand, within DVU2694 at 2806.616 kb on - strand, within DVU2694 at 2806.670 kb on + strand, within DVU2694 at 2806.736 kb on - strand, within DVU2694 at 2806.742 kb on - strand, within DVU2694 at 2806.747 kb on - strand, within DVU2694 at 2806.755 kb on - strand at 2806.759 kb on + strand at 2806.782 kb on + strand at 2806.790 kb on - strand at 2806.987 kb on - strand, within DVU2695 at 2806.990 kb on + strand, within DVU2695 at 2807.050 kb on - strand, within DVU2695 at 2807.121 kb on + strand, within DVU2695 at 2807.121 kb on + strand, within DVU2695 at 2807.121 kb on + strand, within DVU2695 at 2807.138 kb on + strand, within DVU2695 at 2807.138 kb on + strand, within DVU2695 at 2807.187 kb on + strand at 2807.187 kb on + strand at 2807.220 kb on - strand at 2807.229 kb on + strand at 2807.237 kb on - strand at 2807.278 kb on - strand, within DVU2696 at 2807.323 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.410 kb on + strand, within DVU2696 at 2807.418 kb on - strand, within DVU2696 at 2807.437 kb on - strand, within DVU2696 at 2807.461 kb on - strand, within DVU2696 at 2807.598 kb on + strand, within DVU2696 at 2807.602 kb on + strand, within DVU2696 at 2807.672 kb on + strand at 2807.697 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 2,805,478 + DVU2691 0.56 -0.2 2,805,486 - DVU2691 0.58 -0.6 2,805,533 - DVU2691 0.66 -0.3 2,805,552 - DVU2691 0.70 +0.6 2,805,552 - DVU2691 0.70 -2.0 2,805,636 + DVU2691 0.86 +0.3 2,805,645 - DVU2691 0.87 -0.7 2,805,687 - -0.4 2,805,687 - -0.1 2,805,687 - -2.5 2,805,743 - +0.0 2,805,865 + DVU2692 0.61 -0.3 2,805,946 - +0.7 2,806,015 + -0.2 2,806,155 + DVU2693 0.47 +0.2 2,806,155 + DVU2693 0.47 -1.3 2,806,155 + DVU2693 0.47 -0.7 2,806,155 + DVU2693 0.47 -0.5 2,806,155 + DVU2693 0.47 -0.6 2,806,155 + DVU2693 0.47 -1.1 2,806,163 - DVU2693 0.50 +0.1 2,806,163 - DVU2693 0.50 -0.9 2,806,163 - DVU2693 0.50 +0.7 2,806,163 - DVU2693 0.50 -0.3 2,806,277 - -0.6 2,806,364 - -0.0 2,806,365 + +1.1 2,806,373 - +0.7 2,806,486 - DVU2694 0.28 -1.0 2,806,542 - DVU2694 0.41 -0.3 2,806,574 + DVU2694 0.48 -0.4 2,806,608 + DVU2694 0.56 -0.8 2,806,608 + DVU2694 0.56 -0.3 2,806,616 - DVU2694 0.58 -1.7 2,806,670 + DVU2694 0.70 -0.3 2,806,736 - DVU2694 0.86 -0.2 2,806,742 - DVU2694 0.87 -1.6 2,806,747 - DVU2694 0.88 -1.7 2,806,755 - -0.4 2,806,759 + +0.2 2,806,782 + +1.0 2,806,790 - +0.7 2,806,987 - DVU2695 0.43 -1.2 2,806,990 + DVU2695 0.44 +0.1 2,807,050 - DVU2695 0.58 -0.1 2,807,121 + DVU2695 0.75 +0.3 2,807,121 + DVU2695 0.75 -0.3 2,807,121 + DVU2695 0.75 -0.3 2,807,138 + DVU2695 0.79 -0.7 2,807,138 + DVU2695 0.79 +0.4 2,807,187 + +0.1 2,807,187 + +0.0 2,807,220 - -0.6 2,807,229 + -0.3 2,807,237 - -0.3 2,807,278 - DVU2696 0.12 +0.1 2,807,323 - DVU2696 0.21 +1.3 2,807,332 - DVU2696 0.23 -0.3 2,807,332 - DVU2696 0.23 +1.0 2,807,332 - DVU2696 0.23 -0.3 2,807,332 - DVU2696 0.23 -1.1 2,807,332 - DVU2696 0.23 -1.2 2,807,332 - DVU2696 0.23 +0.6 2,807,332 - DVU2696 0.23 -0.0 2,807,332 - DVU2696 0.23 -0.2 2,807,410 + DVU2696 0.39 -0.2 2,807,418 - DVU2696 0.40 -0.3 2,807,437 - DVU2696 0.44 -0.3 2,807,461 - DVU2696 0.49 -0.3 2,807,598 + DVU2696 0.77 +0.1 2,807,602 + DVU2696 0.78 -0.3 2,807,672 + +0.6 2,807,697 - +0.8
Or see this region's nucleotide sequence