Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1718 and DVU1719 are separated by 4 nucleotides DVU1719 and DVU1720 overlap by 4 nucleotides DVU1720 and DVU1721 overlap by 1 nucleotides
DVU1718: DVU1718 - hypothetical protein (TIGR), at 1,792,670 to 1,793,602
DVU1718
DVU1719: DVU1719 - conserved domain protein (TIGR), at 1,793,607 to 1,794,446
DVU1719
DVU1720: DVU1720 - hypothetical protein (TIGR), at 1,794,443 to 1,794,775
DVU1720
DVU1721: DVU1721 - hypothetical protein (TIGR), at 1,794,775 to 1,796,427
DVU1721
Position (kb)
1794
1795 Strain fitness (log2 ratio)
-1
0
1
2 at 1793.645 kb on + strand at 1793.653 kb on - strand at 1793.689 kb on - strand at 1793.713 kb on + strand, within DVU1719 at 1793.713 kb on + strand, within DVU1719 at 1793.742 kb on - strand, within DVU1719 at 1793.883 kb on + strand, within DVU1719 at 1793.908 kb on + strand, within DVU1719 at 1793.958 kb on - strand, within DVU1719 at 1794.006 kb on - strand, within DVU1719 at 1794.014 kb on - strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.024 kb on - strand, within DVU1719 at 1794.063 kb on - strand, within DVU1719 at 1794.086 kb on - strand, within DVU1719 at 1794.088 kb on + strand, within DVU1719 at 1794.129 kb on - strand, within DVU1719 at 1794.154 kb on - strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.165 kb on - strand, within DVU1719 at 1794.195 kb on - strand, within DVU1719 at 1794.290 kb on + strand, within DVU1719 at 1794.384 kb on + strand at 1794.386 kb on + strand at 1794.488 kb on + strand, within DVU1720 at 1794.672 kb on + strand, within DVU1720 at 1794.673 kb on - strand, within DVU1720 at 1794.680 kb on + strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.710 kb on - strand, within DVU1720 at 1794.786 kb on - strand at 1794.815 kb on + strand at 1794.855 kb on - strand at 1794.890 kb on + strand at 1794.994 kb on + strand, within DVU1721 at 1795.111 kb on + strand, within DVU1721 at 1795.148 kb on + strand, within DVU1721 at 1795.180 kb on + strand, within DVU1721 at 1795.180 kb on + strand, within DVU1721 at 1795.188 kb on - strand, within DVU1721 at 1795.213 kb on + strand, within DVU1721 at 1795.306 kb on - strand, within DVU1721 at 1795.353 kb on - strand, within DVU1721 at 1795.359 kb on + strand, within DVU1721 at 1795.431 kb on + strand, within DVU1721 at 1795.591 kb on + strand, within DVU1721 at 1795.626 kb on + strand, within DVU1721 at 1795.697 kb on - strand, within DVU1721
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 1,793,645 + -0.1 1,793,653 - -0.4 1,793,689 - -0.5 1,793,713 + DVU1719 0.13 -0.5 1,793,713 + DVU1719 0.13 -0.0 1,793,742 - DVU1719 0.16 -0.3 1,793,883 + DVU1719 0.33 +1.1 1,793,908 + DVU1719 0.36 +0.2 1,793,958 - DVU1719 0.42 +0.2 1,794,006 - DVU1719 0.47 +0.6 1,794,014 - DVU1719 0.48 -0.5 1,794,016 + DVU1719 0.49 -1.1 1,794,016 + DVU1719 0.49 -0.3 1,794,018 + DVU1719 0.49 -1.4 1,794,018 + DVU1719 0.49 -0.1 1,794,024 - DVU1719 0.50 +0.5 1,794,063 - DVU1719 0.54 -1.4 1,794,086 - DVU1719 0.57 -0.9 1,794,088 + DVU1719 0.57 +1.1 1,794,129 - DVU1719 0.62 -1.4 1,794,154 - DVU1719 0.65 +0.7 1,794,157 + DVU1719 0.65 -0.1 1,794,157 + DVU1719 0.65 -0.4 1,794,165 - DVU1719 0.66 +0.4 1,794,195 - DVU1719 0.70 -0.4 1,794,290 + DVU1719 0.81 +0.4 1,794,384 + +0.7 1,794,386 + -0.5 1,794,488 + DVU1720 0.14 +0.3 1,794,672 + DVU1720 0.69 +0.4 1,794,673 - DVU1720 0.69 +1.0 1,794,680 + DVU1720 0.71 -0.3 1,794,710 - DVU1720 0.80 -0.4 1,794,710 - DVU1720 0.80 +2.1 1,794,710 - DVU1720 0.80 +0.4 1,794,786 - +0.2 1,794,815 + +0.3 1,794,855 - -0.4 1,794,890 + -0.2 1,794,994 + DVU1721 0.13 -0.8 1,795,111 + DVU1721 0.20 -0.4 1,795,148 + DVU1721 0.23 -0.2 1,795,180 + DVU1721 0.25 -0.6 1,795,180 + DVU1721 0.25 +0.0 1,795,188 - DVU1721 0.25 +0.1 1,795,213 + DVU1721 0.26 +1.7 1,795,306 - DVU1721 0.32 -1.0 1,795,353 - DVU1721 0.35 -0.2 1,795,359 + DVU1721 0.35 -0.4 1,795,431 + DVU1721 0.40 -0.7 1,795,591 + DVU1721 0.49 -0.2 1,795,626 + DVU1721 0.51 +0.5 1,795,697 - DVU1721 0.56 -0.2
Or see this region's nucleotide sequence