Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1712 and DVU1713 overlap by 31 nucleotides DVU1713 and DVU1714 are separated by 8 nucleotides
DVU1712: DVU1712 - hypothetical protein (TIGR), at 1,786,746 to 1,788,347
DVU1712
DVU1713: DVU1713 - hypothetical protein (TIGR), at 1,788,317 to 1,788,952
DVU1713
DVU1714: DVU1714 - conserved hypothetical protein (TIGR), at 1,788,961 to 1,791,054
DVU1714
Position (kb)
1788
1789 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1787.325 kb on + strand, within DVU1712 at 1787.331 kb on - strand, within DVU1712 at 1787.331 kb on - strand, within DVU1712 at 1787.333 kb on - strand, within DVU1712 at 1787.412 kb on + strand, within DVU1712 at 1787.421 kb on + strand, within DVU1712 at 1787.481 kb on - strand, within DVU1712 at 1787.532 kb on - strand, within DVU1712 at 1787.648 kb on + strand, within DVU1712 at 1787.681 kb on - strand, within DVU1712 at 1787.715 kb on + strand, within DVU1712 at 1787.744 kb on - strand, within DVU1712 at 1787.808 kb on - strand, within DVU1712 at 1787.850 kb on + strand, within DVU1712 at 1787.883 kb on + strand, within DVU1712 at 1787.883 kb on + strand, within DVU1712 at 1787.914 kb on + strand, within DVU1712 at 1787.922 kb on - strand, within DVU1712 at 1787.922 kb on - strand, within DVU1712 at 1787.927 kb on - strand, within DVU1712 at 1788.027 kb on - strand, within DVU1712 at 1788.074 kb on + strand, within DVU1712 at 1788.160 kb on + strand, within DVU1712 at 1788.265 kb on - strand at 1788.300 kb on - strand at 1788.397 kb on - strand, within DVU1713 at 1788.412 kb on - strand, within DVU1713 at 1788.498 kb on - strand, within DVU1713 at 1788.505 kb on - strand, within DVU1713 at 1788.595 kb on - strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.667 kb on + strand, within DVU1713 at 1788.671 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.680 kb on - strand, within DVU1713 at 1788.685 kb on - strand, within DVU1713 at 1788.713 kb on + strand, within DVU1713 at 1788.721 kb on - strand, within DVU1713 at 1788.776 kb on - strand, within DVU1713 at 1788.776 kb on - strand, within DVU1713 at 1788.788 kb on + strand, within DVU1713 at 1788.805 kb on + strand, within DVU1713 at 1788.825 kb on + strand, within DVU1713 at 1788.887 kb on - strand, within DVU1713 at 1788.998 kb on - strand at 1789.032 kb on + strand at 1789.045 kb on + strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.159 kb on - strand at 1789.159 kb on - strand at 1789.172 kb on + strand, within DVU1714 at 1789.175 kb on - strand, within DVU1714 at 1789.187 kb on + strand, within DVU1714 at 1789.201 kb on - strand, within DVU1714 at 1789.260 kb on - strand, within DVU1714 at 1789.284 kb on - strand, within DVU1714 at 1789.378 kb on - strand, within DVU1714 at 1789.749 kb on + strand, within DVU1714 at 1789.768 kb on + strand, within DVU1714 at 1789.778 kb on - strand, within DVU1714 at 1789.790 kb on + strand, within DVU1714 at 1789.798 kb on - strand, within DVU1714 at 1789.814 kb on - strand, within DVU1714 at 1789.884 kb on - strand, within DVU1714
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 1,787,325 + DVU1712 0.36 -0.6 1,787,331 - DVU1712 0.37 +0.1 1,787,331 - DVU1712 0.37 -0.2 1,787,333 - DVU1712 0.37 -0.5 1,787,412 + DVU1712 0.42 -0.8 1,787,421 + DVU1712 0.42 -0.3 1,787,481 - DVU1712 0.46 -1.5 1,787,532 - DVU1712 0.49 +0.1 1,787,648 + DVU1712 0.56 +0.4 1,787,681 - DVU1712 0.58 +0.4 1,787,715 + DVU1712 0.60 -0.1 1,787,744 - DVU1712 0.62 +0.7 1,787,808 - DVU1712 0.66 -0.1 1,787,850 + DVU1712 0.69 -0.7 1,787,883 + DVU1712 0.71 +0.1 1,787,883 + DVU1712 0.71 -0.2 1,787,914 + DVU1712 0.73 -0.1 1,787,922 - DVU1712 0.73 -0.8 1,787,922 - DVU1712 0.73 +0.1 1,787,927 - DVU1712 0.74 -0.5 1,788,027 - DVU1712 0.80 -0.3 1,788,074 + DVU1712 0.83 +0.6 1,788,160 + DVU1712 0.88 +0.4 1,788,265 - +0.6 1,788,300 - +0.1 1,788,397 - DVU1713 0.13 -0.4 1,788,412 - DVU1713 0.15 -0.6 1,788,498 - DVU1713 0.28 +2.4 1,788,505 - DVU1713 0.30 -0.2 1,788,595 - DVU1713 0.44 -1.1 1,788,647 + DVU1713 0.52 -0.6 1,788,647 + DVU1713 0.52 -0.3 1,788,647 + DVU1713 0.52 -0.9 1,788,667 + DVU1713 0.55 -0.5 1,788,671 + DVU1713 0.56 +0.3 1,788,677 + DVU1713 0.57 +1.4 1,788,677 + DVU1713 0.57 -0.2 1,788,677 + DVU1713 0.57 -1.2 1,788,677 + DVU1713 0.57 +0.4 1,788,680 - DVU1713 0.57 +0.7 1,788,685 - DVU1713 0.58 -1.9 1,788,713 + DVU1713 0.62 -0.7 1,788,721 - DVU1713 0.64 -0.3 1,788,776 - DVU1713 0.72 -0.5 1,788,776 - DVU1713 0.72 +1.4 1,788,788 + DVU1713 0.74 -0.6 1,788,805 + DVU1713 0.77 -1.1 1,788,825 + DVU1713 0.80 -0.9 1,788,887 - DVU1713 0.90 +0.1 1,788,998 - +0.4 1,789,032 + +0.1 1,789,045 + -0.6 1,789,053 - -0.3 1,789,053 - -0.7 1,789,053 - -0.5 1,789,053 - -0.1 1,789,159 - +0.4 1,789,159 - +0.1 1,789,172 + DVU1714 0.10 +0.6 1,789,175 - DVU1714 0.10 +1.8 1,789,187 + DVU1714 0.11 -0.4 1,789,201 - DVU1714 0.11 +0.4 1,789,260 - DVU1714 0.14 +2.4 1,789,284 - DVU1714 0.15 -0.4 1,789,378 - DVU1714 0.20 -0.6 1,789,749 + DVU1714 0.38 -0.5 1,789,768 + DVU1714 0.39 -0.2 1,789,778 - DVU1714 0.39 -0.2 1,789,790 + DVU1714 0.40 -0.7 1,789,798 - DVU1714 0.40 -0.9 1,789,814 - DVU1714 0.41 +0.0 1,789,884 - DVU1714 0.44 +0.3
Or see this region's nucleotide sequence