Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1451 and dtd overlap by 38 nucleotides dtd and fadD are separated by 4 nucleotides
DVU1451: DVU1451 - response regulator (TIGR), at 1,529,130 to 1,530,299
DVU1451
DVU1452: dtd - D-tyrosyl-tRNA(Tyr) deacylase (TIGR), at 1,530,262 to 1,530,750
dtd
DVU1453: fadD - long-chain-fatty-acid--CoA ligase (TIGR), at 1,530,755 to 1,532,449
fadD
Position (kb)
1530
1531 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1529.332 kb on + strand, within DVU1451 at 1529.345 kb on + strand, within DVU1451 at 1529.364 kb on + strand, within DVU1451 at 1529.484 kb on + strand, within DVU1451 at 1529.484 kb on - strand, within DVU1451 at 1529.494 kb on + strand, within DVU1451 at 1529.515 kb on - strand, within DVU1451 at 1529.526 kb on - strand, within DVU1451 at 1529.526 kb on - strand, within DVU1451 at 1529.575 kb on - strand, within DVU1451 at 1529.588 kb on + strand, within DVU1451 at 1529.600 kb on - strand, within DVU1451 at 1529.642 kb on + strand, within DVU1451 at 1529.675 kb on + strand, within DVU1451 at 1529.705 kb on - strand, within DVU1451 at 1529.753 kb on + strand, within DVU1451 at 1529.768 kb on + strand, within DVU1451 at 1529.880 kb on - strand, within DVU1451 at 1529.946 kb on + strand, within DVU1451 at 1530.021 kb on + strand, within DVU1451 at 1530.034 kb on - strand, within DVU1451 at 1530.070 kb on + strand, within DVU1451 at 1530.225 kb on + strand at 1530.267 kb on + strand at 1530.313 kb on + strand, within dtd at 1530.511 kb on + strand, within dtd at 1530.680 kb on - strand, within dtd at 1530.761 kb on - strand at 1530.851 kb on - strand at 1530.891 kb on - strand at 1530.909 kb on - strand at 1530.929 kb on - strand, within fadD at 1530.946 kb on - strand, within fadD at 1530.960 kb on + strand, within fadD at 1530.968 kb on - strand, within fadD at 1530.968 kb on - strand, within fadD at 1531.163 kb on - strand, within fadD at 1531.179 kb on + strand, within fadD at 1531.187 kb on - strand, within fadD at 1531.206 kb on + strand, within fadD at 1531.214 kb on - strand, within fadD at 1531.270 kb on - strand, within fadD at 1531.359 kb on + strand, within fadD at 1531.359 kb on + strand, within fadD at 1531.359 kb on + strand, within fadD at 1531.367 kb on - strand, within fadD at 1531.367 kb on - strand, within fadD at 1531.367 kb on - strand, within fadD at 1531.404 kb on + strand, within fadD at 1531.456 kb on + strand, within fadD at 1531.591 kb on + strand, within fadD at 1531.654 kb on + strand, within fadD at 1531.693 kb on + strand, within fadD at 1531.699 kb on + strand, within fadD at 1531.743 kb on + strand, within fadD
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 1,529,332 + DVU1451 0.17 +0.1 1,529,345 + DVU1451 0.18 -0.0 1,529,364 + DVU1451 0.20 -0.7 1,529,484 + DVU1451 0.30 -0.1 1,529,484 - DVU1451 0.30 -0.5 1,529,494 + DVU1451 0.31 -0.2 1,529,515 - DVU1451 0.33 -0.1 1,529,526 - DVU1451 0.34 -1.5 1,529,526 - DVU1451 0.34 -0.7 1,529,575 - DVU1451 0.38 -0.4 1,529,588 + DVU1451 0.39 +0.6 1,529,600 - DVU1451 0.40 +0.2 1,529,642 + DVU1451 0.44 +1.2 1,529,675 + DVU1451 0.47 -0.8 1,529,705 - DVU1451 0.49 +0.2 1,529,753 + DVU1451 0.53 -2.0 1,529,768 + DVU1451 0.55 -0.1 1,529,880 - DVU1451 0.64 +2.4 1,529,946 + DVU1451 0.70 -2.4 1,530,021 + DVU1451 0.76 +1.8 1,530,034 - DVU1451 0.77 -0.6 1,530,070 + DVU1451 0.80 +0.4 1,530,225 + -2.0 1,530,267 + +0.3 1,530,313 + dtd DVU1452 0.10 -0.2 1,530,511 + dtd DVU1452 0.51 -0.7 1,530,680 - dtd DVU1452 0.85 -1.8 1,530,761 - -0.6 1,530,851 - +0.0 1,530,891 - +0.8 1,530,909 - -0.9 1,530,929 - fadD DVU1453 0.10 -1.1 1,530,946 - fadD DVU1453 0.11 +0.9 1,530,960 + fadD DVU1453 0.12 -0.5 1,530,968 - fadD DVU1453 0.13 -0.4 1,530,968 - fadD DVU1453 0.13 -0.4 1,531,163 - fadD DVU1453 0.24 -0.4 1,531,179 + fadD DVU1453 0.25 -0.0 1,531,187 - fadD DVU1453 0.25 -0.1 1,531,206 + fadD DVU1453 0.27 -0.3 1,531,214 - fadD DVU1453 0.27 +0.1 1,531,270 - fadD DVU1453 0.30 +0.3 1,531,359 + fadD DVU1453 0.36 -0.3 1,531,359 + fadD DVU1453 0.36 +0.0 1,531,359 + fadD DVU1453 0.36 -0.4 1,531,367 - fadD DVU1453 0.36 -0.2 1,531,367 - fadD DVU1453 0.36 -0.6 1,531,367 - fadD DVU1453 0.36 +0.1 1,531,404 + fadD DVU1453 0.38 +0.3 1,531,456 + fadD DVU1453 0.41 +0.2 1,531,591 + fadD DVU1453 0.49 +0.8 1,531,654 + fadD DVU1453 0.53 -0.4 1,531,693 + fadD DVU1453 0.55 +3.0 1,531,699 + fadD DVU1453 0.56 -1.1 1,531,743 + fadD DVU1453 0.58 +0.2
Or see this region's nucleotide sequence