Experiment: MoYLS4 with Polyethylene glycol 5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt lepB and dctM are separated by 449 nucleotides dctM and DVU0706 overlap by 4 nucleotides DVU0706 and dctP are separated by 84 nucleotides
DVU0704: lepB - signal peptidase I (TIGR), at 784,042 to 784,641
lepB
DVU0705: dctM - TRAP dicarboxylate transporter, putative (TIGR), at 785,091 to 786,374
dctM
DVU0706: DVU0706 - membrane protein, putative (TIGR), at 786,371 to 786,841
DVU0706
DVU0707: dctP - TRAP dicarboxylate family transporter (TIGR), at 786,926 to 787,942
dctP
Position (kb) 785
786
787 Strain fitness (log2 ratio) -1
0
1 at 784.800 kb on - strand at 784.945 kb on + strand at 784.945 kb on + strand at 784.945 kb on + strand at 784.975 kb on + strand at 784.983 kb on - strand at 784.983 kb on - strand at 785.009 kb on - strand at 785.019 kb on - strand at 785.060 kb on + strand at 785.174 kb on + strand at 785.204 kb on + strand at 785.212 kb on - strand at 785.217 kb on - strand at 785.270 kb on + strand, within dctM at 785.273 kb on - strand, within dctM at 785.359 kb on + strand, within dctM at 785.576 kb on + strand, within dctM at 785.740 kb on - strand, within dctM at 785.825 kb on + strand, within dctM at 785.852 kb on - strand, within dctM at 785.904 kb on + strand, within dctM at 785.909 kb on + strand, within dctM at 785.980 kb on + strand, within dctM at 786.081 kb on + strand, within dctM at 786.107 kb on - strand, within dctM at 786.135 kb on + strand, within dctM at 786.171 kb on + strand, within dctM at 786.171 kb on + strand, within dctM at 786.318 kb on - strand at 786.336 kb on - strand at 786.378 kb on - strand at 786.398 kb on + strand at 786.406 kb on - strand at 786.450 kb on + strand, within DVU0706 at 786.566 kb on - strand, within DVU0706 at 786.733 kb on - strand, within DVU0706 at 786.780 kb on + strand, within DVU0706 at 786.780 kb on + strand, within DVU0706 at 786.788 kb on - strand, within DVU0706 at 786.788 kb on - strand, within DVU0706 at 786.972 kb on + strand at 787.026 kb on + strand at 787.034 kb on - strand, within dctP at 787.049 kb on - strand, within dctP at 787.099 kb on + strand, within dctP at 787.205 kb on - strand, within dctP at 787.212 kb on - strand, within dctP at 787.226 kb on - strand, within dctP at 787.226 kb on - strand, within dctP at 787.244 kb on + strand, within dctP at 787.285 kb on - strand, within dctP at 787.310 kb on - strand, within dctP at 787.310 kb on - strand, within dctP
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polyethylene glycol 5% remove 784,800 - +0.9 784,945 + -0.3 784,945 + -0.0 784,945 + -0.3 784,975 + +0.7 784,983 - -0.0 784,983 - -0.0 785,009 - -0.4 785,019 - -0.4 785,060 + -0.1 785,174 + -1.6 785,204 + -0.7 785,212 - -0.3 785,217 - +0.1 785,270 + dctM DVU0705 0.14 +0.1 785,273 - dctM DVU0705 0.14 -0.1 785,359 + dctM DVU0705 0.21 +1.0 785,576 + dctM DVU0705 0.38 -0.5 785,740 - dctM DVU0705 0.51 +0.3 785,825 + dctM DVU0705 0.57 +1.3 785,852 - dctM DVU0705 0.59 -1.5 785,904 + dctM DVU0705 0.63 +0.6 785,909 + dctM DVU0705 0.64 -1.2 785,980 + dctM DVU0705 0.69 +1.3 786,081 + dctM DVU0705 0.77 -0.0 786,107 - dctM DVU0705 0.79 +0.3 786,135 + dctM DVU0705 0.81 +0.3 786,171 + dctM DVU0705 0.84 -0.2 786,171 + dctM DVU0705 0.84 -0.1 786,318 - +1.3 786,336 - +0.2 786,378 - +0.5 786,398 + -0.0 786,406 - -0.1 786,450 + DVU0706 0.17 -0.5 786,566 - DVU0706 0.41 -0.9 786,733 - DVU0706 0.77 +0.3 786,780 + DVU0706 0.87 -0.9 786,780 + DVU0706 0.87 +0.2 786,788 - DVU0706 0.89 -0.2 786,788 - DVU0706 0.89 +0.6 786,972 + +1.7 787,026 + -1.1 787,034 - dctP DVU0707 0.11 +0.9 787,049 - dctP DVU0707 0.12 -0.1 787,099 + dctP DVU0707 0.17 -0.5 787,205 - dctP DVU0707 0.27 +0.4 787,212 - dctP DVU0707 0.28 -0.3 787,226 - dctP DVU0707 0.29 -0.0 787,226 - dctP DVU0707 0.29 -0.4 787,244 + dctP DVU0707 0.31 -0.0 787,285 - dctP DVU0707 0.35 +0.4 787,310 - dctP DVU0707 0.38 -1.4 787,310 - dctP DVU0707 0.38 -0.1
Or see this region's nucleotide sequence