Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006367

Experiment: RCH2_defined_glucose_5mM with Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Sucrose 5 mM
2,733,708	+		ABIE53_006366	0.22	+0.9
2,733,708	+		ABIE53_006366	0.22	-0.9
2,733,709	-		ABIE53_006366	0.22	+2.9
2,733,709	-		ABIE53_006366	0.22	-0.6
2,733,709	-		ABIE53_006366	0.22	+2.1
2,733,714	+		ABIE53_006366	0.23	-2.5
2,733,714	+		ABIE53_006366	0.23	+0.3
2,733,714	+		ABIE53_006366	0.23	+1.5
2,733,715	-		ABIE53_006366	0.23	+1.8
2,733,715	-		ABIE53_006366	0.23	+0.4
2,733,786	-		ABIE53_006366	0.30	+1.1
2,733,892	-		ABIE53_006366	0.40	-0.4
2,733,967	+		ABIE53_006366	0.48	+0.9
2,734,111	+		ABIE53_006366	0.63	-2.1
2,734,186	+		ABIE53_006366	0.70	-1.4
2,734,187	-		ABIE53_006366	0.70	+2.2
2,734,187	-		ABIE53_006366	0.70	+0.9
2,734,339	+		ABIE53_006366	0.85	+0.8
2,734,339	+		ABIE53_006366	0.85	+0.4
2,734,339	+		ABIE53_006366	0.85	+0.9
2,734,340	-		ABIE53_006366	0.86	+0.3
2,734,414	-				+1.8
2,734,481	-				-0.1
2,734,542	+				-0.9
2,734,544	+				+1.6
2,734,544	+				-2.4
2,734,544	+				-0.9
2,734,544	+				+0.9
2,734,544	+				+0.6
2,734,545	-				-0.4
2,734,545	-				-0.1
2,734,605	+				-0.4
2,734,611	+				+0.8
2,734,611	+				+1.3
2,734,611	+				+0.9
2,734,612	-				-2.6
2,734,728	+		ABIE53_006367	0.17	-2.0
2,734,728	+		ABIE53_006367	0.17	-2.1
2,734,729	-		ABIE53_006367	0.17	+0.3
2,734,729	-		ABIE53_006367	0.17	-0.4
2,734,779	-		ABIE53_006367	0.22	+1.2
2,735,099	+		ABIE53_006367	0.57	+0.9
2,735,349	+		ABIE53_006367	0.85	-1.1
2,735,418	+				+0.2
2,735,418	+				+2.4
2,735,418	+				+1.2
2,735,418	+				-1.6
2,735,418	+				-0.1
2,735,418	+				+1.5
2,735,419	-				+0.8
2,735,419	-				-0.2
2,735,548	+				-3.1
2,735,549	-				-1.4
2,735,549	-				-1.4
2,735,571	+				+2.3
2,735,571	+				-0.8
2,735,572	-				-0.1
2,735,572	-				-1.2
2,735,572	-				-0.1
2,735,572	-				-1.4
2,735,572	-				+1.5
2,735,574	+				+0.8
2,735,574	+				-2.2
2,735,574	+				+1.9
2,735,574	+				-3.5
2,735,574	+				-1.9
2,735,574	+				+0.3
2,735,575	-				-2.2
2,735,575	-				-0.1
2,735,726	-				-0.4
2,735,726	-				+0.5
2,735,771	+				+1.0
2,735,771	+				+2.0
2,735,771	+				+0.4
2,735,771	+				+1.1
2,735,771	+				-0.8
2,735,772	-				-2.2
2,735,772	-				+0.1
2,735,772	-				-1.6
2,735,772	-				+1.0
2,735,962	+		ABIE53_006368	0.16	+1.0
2,735,962	+		ABIE53_006368	0.16	+0.4
2,735,962	+		ABIE53_006368	0.16	+0.9
2,735,963	-		ABIE53_006368	0.16	-1.2
2,735,963	-		ABIE53_006368	0.16	+0.7
2,735,963	-		ABIE53_006368	0.16	-0.0
2,735,963	-		ABIE53_006368	0.16	+0.8
2,735,963	-		ABIE53_006368	0.16	-0.6
2,735,968	+		ABIE53_006368	0.17	+0.7
2,735,968	+		ABIE53_006368	0.17	-1.8
2,735,968	+		ABIE53_006368	0.17	-0.3
2,735,968	+		ABIE53_006368	0.17	-0.4
2,735,969	-		ABIE53_006368	0.17	+0.2
2,736,114	-		ABIE53_006368	0.32	-0.5
2,736,338	+		ABIE53_006368	0.54	+0.5
2,736,338	+		ABIE53_006368	0.54	-0.4
2,736,339	-		ABIE53_006368	0.54	-2.9
2,736,339	-		ABIE53_006368	0.54	-1.4
2,736,438	+		ABIE53_006368	0.64	+2.0
2,736,438	+		ABIE53_006368	0.64	-0.3
2,736,438	+		ABIE53_006368	0.64	-0.4
2,736,438	+		ABIE53_006368	0.64	+2.6
2,736,439	-		ABIE53_006368	0.64	-2.3
2,736,439	-		ABIE53_006368	0.64	-1.4
2,736,439	-		ABIE53_006368	0.64	-0.6
2,736,462	+		ABIE53_006368	0.66	+0.5
2,736,462	+		ABIE53_006368	0.66	-0.9
2,736,462	+		ABIE53_006368	0.66	-2.8
2,736,462	+		ABIE53_006368	0.66	+0.0
2,736,463	-		ABIE53_006368	0.66	+1.0
2,736,463	-		ABIE53_006368	0.66	-0.6
2,736,463	-		ABIE53_006368	0.66	+2.0
2,736,463	-		ABIE53_006368	0.66	-1.2
2,736,463	-		ABIE53_006368	0.66	-0.4
2,736,471	+		ABIE53_006368	0.67	-0.1
2,736,471	+		ABIE53_006368	0.67	-0.9
2,736,484	+		ABIE53_006368	0.69	+2.0
2,736,485	-		ABIE53_006368	0.69	-0.0