Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005374

Experiment: RCH2_defined_glucose_5mM with Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Sucrose 5 mM
1,643,671	+		ABIE53_005373	0.35	+1.1
1,643,672	-		ABIE53_005373	0.35	-0.3
1,643,690	-		ABIE53_005373	0.37	-1.5
1,643,690	-		ABIE53_005373	0.37	-0.8
1,643,690	-		ABIE53_005373	0.37	-0.2
1,643,690	-		ABIE53_005373	0.37	+0.0
1,643,795	-		ABIE53_005373	0.44	-0.5
1,644,037	-		ABIE53_005373	0.61	+0.5
1,644,075	-		ABIE53_005373	0.64	+1.5
1,644,075	-		ABIE53_005373	0.64	+0.0
1,644,135	+		ABIE53_005373	0.68	-1.0
1,644,146	+		ABIE53_005373	0.68	-1.0
1,644,146	+		ABIE53_005373	0.68	+0.0
1,644,147	-		ABIE53_005373	0.69	-0.3
1,644,147	-		ABIE53_005373	0.69	+0.0
1,644,147	-		ABIE53_005373	0.69	+2.2
1,644,147	-		ABIE53_005373	0.69	-0.8
1,644,147	-		ABIE53_005373	0.69	-1.9
1,644,259	+		ABIE53_005373	0.76	-1.0
1,644,259	+		ABIE53_005373	0.76	-1.7
1,644,260	-		ABIE53_005373	0.76	-0.8
1,644,260	-		ABIE53_005373	0.76	+0.0
1,644,380	-		ABIE53_005373	0.85	-2.9
1,644,411	+		ABIE53_005373	0.87	-0.8
1,644,411	+		ABIE53_005373	0.87	-0.1
1,644,411	+		ABIE53_005373	0.87	-0.8
1,644,411	+		ABIE53_005373	0.87	-0.7
1,644,412	-		ABIE53_005373	0.87	+2.0
1,644,412	-		ABIE53_005373	0.87	+2.0
1,644,412	-		ABIE53_005373	0.87	+0.4
1,644,412	-		ABIE53_005373	0.87	-2.4
1,644,412	-		ABIE53_005373	0.87	-1.9
1,644,412	-		ABIE53_005373	0.87	+0.4
1,644,416	-		ABIE53_005373	0.87	+0.9
1,644,487	+				+0.4
1,644,488	-				+0.4
1,644,488	-				+0.6
1,644,488	-				-0.6
1,644,504	-				+1.6
1,644,610	+				-0.6
1,644,611	-				+0.4
1,644,749	-		ABIE53_005374	0.12	+0.2
1,644,749	-		ABIE53_005374	0.12	+0.8
1,644,845	-		ABIE53_005374	0.21	-0.6
1,644,899	+		ABIE53_005374	0.25	+0.0
1,644,900	-		ABIE53_005374	0.25	+2.2
1,644,900	-		ABIE53_005374	0.25	-2.1
1,644,985	-		ABIE53_005374	0.33	-1.3
1,644,985	-		ABIE53_005374	0.33	+3.5
1,645,006	-		ABIE53_005374	0.35	-1.6
1,645,039	+		ABIE53_005374	0.38	+1.4
1,645,039	+		ABIE53_005374	0.38	-0.8
1,645,039	+		ABIE53_005374	0.38	-1.1
1,645,040	-		ABIE53_005374	0.38	-0.6
1,645,040	-		ABIE53_005374	0.38	-0.8
1,645,198	+		ABIE53_005374	0.52	-2.2
1,645,205	+		ABIE53_005374	0.52	+1.0
1,645,222	+		ABIE53_005374	0.54	+0.4
1,645,222	+		ABIE53_005374	0.54	-0.3
1,645,223	-		ABIE53_005374	0.54	+2.0
1,645,223	-		ABIE53_005374	0.54	-1.6
1,645,223	-		ABIE53_005374	0.54	+0.4
1,645,428	+		ABIE53_005374	0.72	+2.2
1,645,501	-		ABIE53_005374	0.78	-1.0
1,645,514	-		ABIE53_005374	0.79	-1.9
1,645,791	+				+3.1
1,645,791	+				-2.7
1,645,999	+		ABIE53_005375	0.27	+0.4
1,645,999	+		ABIE53_005375	0.27	-0.5
1,646,000	-		ABIE53_005375	0.27	+2.0
1,646,067	+		ABIE53_005375	0.34	-1.6
1,646,103	+		ABIE53_005375	0.38	+0.0
1,646,104	-		ABIE53_005375	0.38	+0.5
1,646,104	-		ABIE53_005375	0.38	-0.8
1,646,104	-		ABIE53_005375	0.38	+0.7
1,646,104	-		ABIE53_005375	0.38	-1.9
1,646,364	+		ABIE53_005375	0.65	+1.1
1,646,364	+		ABIE53_005375	0.65	-1.9
1,646,365	-		ABIE53_005375	0.65	-3.1
1,646,368	+		ABIE53_005375	0.66	-0.4
1,646,434	+		ABIE53_005375	0.73	-4.0
1,646,436	+		ABIE53_005375	0.73	-1.3
1,646,437	-		ABIE53_005375	0.73	+1.0
1,646,437	-		ABIE53_005375	0.73	+0.0
1,646,437	-		ABIE53_005375	0.73	+0.4
1,646,670	+				+2.0
1,646,670	+				-1.5
1,646,670	+				-1.0
1,646,670	+				-0.6
1,646,671	-				+0.4
1,646,671	-				+2.0
1,646,671	-				-1.3
1,646,671	-				-1.8
1,646,686	+				+0.6
1,646,686	+				-1.2