Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002214

Experiment: RCH2_defined_glucose_5mM with Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Sucrose 5 mM
2,485,993	-		ABIE53_002213	0.19	-1.1
2,486,142	+		ABIE53_002213	0.31	+1.9
2,486,143	-		ABIE53_002213	0.31	-0.7
2,486,143	-		ABIE53_002213	0.31	-2.3
2,486,143	-		ABIE53_002213	0.31	+1.9
2,486,143	-		ABIE53_002213	0.31	-0.4
2,486,143	-		ABIE53_002213	0.31	-1.2
2,486,148	+		ABIE53_002213	0.32	-2.6
2,486,148	+		ABIE53_002213	0.32	-0.1
2,486,148	+		ABIE53_002213	0.32	-0.9
2,486,185	-		ABIE53_002213	0.35	-2.1
2,486,280	+		ABIE53_002213	0.43	-0.4
2,486,308	+		ABIE53_002213	0.45	+0.5
2,486,308	+		ABIE53_002213	0.45	-1.7
2,486,439	+		ABIE53_002213	0.56	-0.2
2,486,554	-		ABIE53_002213	0.65	-0.3
2,486,554	-		ABIE53_002213	0.65	-0.1
2,486,664	+		ABIE53_002213	0.74	-1.2
2,486,665	-		ABIE53_002213	0.74	-1.2
2,486,665	-		ABIE53_002213	0.74	-3.0
2,486,691	+		ABIE53_002213	0.76	-1.9
2,486,691	+		ABIE53_002213	0.76	-0.8
2,486,830	-		ABIE53_002213	0.88	-0.6
2,486,989	-				-1.1
2,486,989	-				-1.9
2,486,989	-				+1.9
2,486,989	-				-1.5
2,486,989	-				+0.8
2,486,994	+				-0.4
2,486,994	+				-0.7
2,486,995	-				+1.8
2,487,138	+				+1.1
2,487,142	-				+0.6
2,487,153	+		ABIE53_002214	0.10	-1.2
2,487,155	+		ABIE53_002214	0.10	-0.6
2,487,156	-		ABIE53_002214	0.10	+0.0
2,487,166	-		ABIE53_002214	0.11	+0.2
2,487,166	-		ABIE53_002214	0.11	-0.9
2,487,169	-		ABIE53_002214	0.11	-2.0
2,487,203	+		ABIE53_002214	0.13	-0.1
2,487,203	+		ABIE53_002214	0.13	+1.5
2,487,531	+		ABIE53_002214	0.33	-2.4
2,487,532	-		ABIE53_002214	0.33	-0.4
2,487,532	-		ABIE53_002214	0.33	-0.6
2,487,624	-		ABIE53_002214	0.38	+3.5
2,487,624	-		ABIE53_002214	0.38	-2.2
2,487,787	+		ABIE53_002214	0.48	-0.1
2,487,895	-		ABIE53_002214	0.54	-2.3
2,487,898	-		ABIE53_002214	0.55	+1.0
2,487,969	+		ABIE53_002214	0.59	-0.1
2,487,969	+		ABIE53_002214	0.59	-1.4
2,487,970	-		ABIE53_002214	0.59	+0.3
2,487,970	-		ABIE53_002214	0.59	+0.9
2,488,068	+		ABIE53_002214	0.65	-2.0
2,488,068	+		ABIE53_002214	0.65	+1.2
2,488,069	-		ABIE53_002214	0.65	-0.1
2,488,069	-		ABIE53_002214	0.65	-1.4
2,488,087	-		ABIE53_002214	0.66	-1.0
2,488,383	+		ABIE53_002214	0.84	-1.4
2,488,383	+		ABIE53_002214	0.84	+0.3
2,488,410	+		ABIE53_002214	0.85	+1.7
2,488,410	+		ABIE53_002214	0.85	-1.5
2,488,411	-		ABIE53_002214	0.85	-1.2
2,488,546	+				-1.5
2,488,774	+				+0.1
2,488,775	-				-0.8
2,488,782	-				+0.5
2,488,782	-				-1.4
2,488,913	+		ABIE53_002215	0.14	-1.5
2,489,123	+		ABIE53_002215	0.36	+2.5
2,489,123	+		ABIE53_002215	0.36	+1.2
2,489,123	+		ABIE53_002215	0.36	+0.1
2,489,123	+		ABIE53_002215	0.36	-1.2
2,489,124	-		ABIE53_002215	0.36	-0.1
2,489,146	+		ABIE53_002215	0.39	-0.1
2,489,433	+		ABIE53_002215	0.69	+1.9
2,489,434	-		ABIE53_002215	0.69	-1.5